ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SMCO1
GTPBP6
BSDC1
ITGB3BP
EFCAB7
APOA1
C19orf18
AADACL4
DEGS2
YPEL3
TBX6
KRBA1
UBE2F
CBX1
ZFP30
MTRNR2L8
OPRL1
LKAAEAR1
RABGAP1
STC1
TMEM89
RABGAP1L
ZNF829
ZNF568
DISP1
MAPRE2
ZNF32
ZNF572
LCN8
GBA
DNAJC25-GNG10
DNAJC25
PDE11A
ZNF623
SAMD4B
PTDSS2
ANO9
COMMD2
KRTAP5-1
PRSS38
MTF2
COL23A1
SF3A3
YWHAQ
DUSP6
DHRS2
RBBP5
RNF187
TMEM229B
NUF2
COX16
CANT1
COL18A1
DBNDD2
MROH7
UTP3
CLTB
TBC1D19
ZNF292
CFHR4
TMEM132A
GALNT1
ATP5MC2
TMEM41A
ZNF566
ZSCAN22
CRYAA2
CRYAA
MMEL1
RPS7
TRMT5
SLC38A6
GCNT7
FAM209A
TOMM20
IGFALS
PRRT1B
ACTL8
ANP32D
SOD2
WTAP
TRIP4
GTF2H4
HTR5A
RNF125
RWDD1
CCDC174
SSBP1
ZNF772
MAN2A1
EPHA3
TSFM
GPRC5C
TTI2
ATP1A1
CAT
RERE
CEP85L
SELENOH
NEMF
SLC1A7
NDUFB3
FAM126B
SLC24A1
INTS14
MED23
ZNF570
ZNF569
CWC25
MRPL1
ARHGAP39
GLIPR1L2
MAST4
ZNF117
PEX3
ADAT2
AP3S2
SLC43A2
PDE1A
PNMA2
DPYSL2
BMS1
GTF2H2C_2
GTF2H2C
GALNTL5
SLC45A4
BRAP
ACAD10
LARP1
LRCOL1
TTC26
TIGD2
TTLL1
PAXBP1
MNAT1
ZBED9
MLPH
DMAP1
MTR
FBXW7
ZNF790
YJU2
OSGIN1
PPRC1
TMEM242
CDC5L
PNPLA7
MAMDC2
RAB18
TXLNB
JMJD1C
SUMO3
MMACHC
CCDC163
NR1H3
ACP2
LRRC49
THAP10
FAM184A
RBBP9
FGFBP3
FAM13A
SNRPE
C2orf88
CFAP298-TCP10L
CFAP298
PDCD6IP
SMG7
NDUFS7
KDM3A
DNAJB12
SIKE1
CCDC130
TTC32
TDP2
ACOT13
HDAC2
TMEM14C
FRA10AC1
PAFAH2
RAB30
PPIH
BANP
MRPS18C
HELQ
RAB5IF
GCGR
TMEM44
APRT
ERN2
TATDN2
TLR2
NME1-NME2
NME1
RNF217
NEU1
ZNF226
ZMPSTE24
CCDC59
MRPL48
CALCRL
CHCHD6
FAIM
SKP2
LMBRD2
TFPT
PRPF31
TARS3
IARS1
REEP3
PDGFD
EIF2D
SLC33A1
GABPB2
TMEM208
LRRC29
RUNDC3B
MTRNR2L2
MSH3
DHFR
ZNF391
PARK7
RANBP2
NUP155
RCAN1
POLR3B
CD14
POLDIP3
LRFN3
SLITRK5
LURAP1L
TMEM38A
SMIM7
RPL27
ZNF571
ZNF540
POMGNT1
LURAP1
PUS10
PEX13
KANSL3
FER1L5
RBM45
ZNF300
RTTN
TPM4
PNPO
SPANXC
DEK
HAX1
MRPS14
CCDC107
TRMO
ZNF350
EXTL2
STAT3
NECAP2
LIMK1
BORCS6
SYNPO2
ZNF687
WDR11
MRPS23
SMIM13
TMEM259
CNN2
CTAG1B
CTAG1A
RPS29
TACO1
SPANXB1
GORASP2
SMIM31
SAR1B
PKIB
SERINC1
CCNC
GALK2
SNRPD1
COPS2
PARP2
ATP6V0E2
TMEM43
CHCHD4
RPS3A
ZNF527
DCP1A
TEFM
BAIAP2
ZNF165
RPL7A
MED22
SURF2
SURF1
GOSR1
HEXA
STOML2
RPA2
ZBTB8OS
RBBP4
ZNF354A
FAM199X
NCOA7
GTPBP3
ANO8
RIF1
TIGD1
EIF4E2
ZNF791
ZNF490
MYO1H
RPS14
RPL5
SAMD1
SLC35B4
TTLL12
EPB41
MOB4
TBL1X
SGMS2
AMD1
CDK19
EP400
VPS45
SLC3A2
FAM174A
REXO4
ADAMTS13
CUL5
DCT
PIGC
ZNF20
RRP1
ZNF324B
STX16
NME4
BORCS7
RPS13
ECHDC1
SLAIN1
ZNF285
SULT1C2
AURKAIP1
DCLRE1B
AP4B1
INTS2
CCNL1
ARHGEF16
DSTYK
EPRS1
EFHD1
CLPTM1
SNCG
MMRN2
MRPL40
HIRA
NUP54
PIH1D2
NKAPD1
NUP107
SLC25A16
MSRA
LRP6
SF3B5
STX18
DRG2
REN
FAM13B
MIER1
DNAI4
THEM4
EIF3F
COX7A2
IL36RN
IL36B
SLC35A3
POLG
MRS2
SDR42E1
LUC7L2
FMC1-LUC7L2
FMC1
ZNF385A
POLR1F
EXO1
RPL37
ST6GALNAC6
ZNF383
PCDH15
NOS3
NOP16
HIGD2A
SPATA18
PPIP5K2
GIN1
MITD1
ZNF841
NBPF1
COPS4
CDC73
HECTD1
NRL
DCAF11
IRAK2
ZSCAN30
ZMYND8
KRR1
TOGARAM1
KLHL28
SARS2
MRPS12
TMEM107
CLDN16
DYNLRB2
TTC3
FBXO44
FBXO2
FDPS
ACTRT2
APOBEC3B
TXNRD2
WDR36
TGFBR2
TAF12
GPR137
TRIM46
KRTCAP2
SUPT3H
N6AMT1
GOLPH3L
ALG10
MTMR9
CHEK1
KRTAP10-9
CNPY1
MRPS33
SPRR2F
RRN3
MFSD8
ABHD18
HIGD2B
BBS4
HAPLN2
OSGEP
APEX1
PXMP2
POLE
CDKL2
ACYP2
SLC2A7
CDK5RAP1
GSTA4
NOL12
PPP1R11
PPOX
RPS12
DAXX
AFG1L
GPR89A
OAZ3
CCDC97
LGR5
DDX41
ATG5
STXBP3
TRMT11
MRPL9
LAMTOR5
CCDC120
NARF
CYBC1
PDCD7
SLTM
PPIG
GRPEL2
TPR
ODR4
UBOX5
FASTKD5
LRRC59
GABPA
ATP5PF
CCDC33
NMRAL1
HMOX2
TMEM106B
SPG7
ZNF793
ZNF561
ITFG2
PHIP
SRP9
PRDM1
HIPK1
FOXO3B
FOXP1
GPN2
METTL9
DDX46
TMEM72
GABRR2
CSNK1E
IPO4
ZNF134
ADNP
ABCB10
TNPO3
P2RX6
POLR3G
MBLAC2
ZNF56
PNISR
UBR2
H2BU1
H2AW
SUPT7L
SLC4A1AP
PES1
LOC102724265
ZNF501
LPIN1
CCDC200
ZNF846
DCP1B
MICU2
LOC100129484
BRF2
SEL1L
HEATR1
WBP1
INO80B
B4GALNT2
DCAF8
TSTD3
TCTE3
ERMARD
SYT1
CLN5
SNX14
SYNCRIP
OR4K17
RAB37
ATF7IP
TSEN15
WDR74
ARID1A
TRDMT1
PLS1
SLC2A4
SLC25A21
SRP54
C3orf14
ZSCAN31
HMGB1
USPL1
ZSCAN25
GOLGA5
ZKSCAN3
HBS1L
EIF3D
ELFN2
ADCY10
MTIF2
DHX16
ALG14
NUP205
CNIH4
PSMD11
ALDH9A1
TMEM116
ERP29
VPS26C
BAG6
APOM
SLC30A5
SULT1C3
MAD1L1
CPPED1
ATG4C
ABCA3
SLC25A53
RIMBP3C
RIMBP3B
ZCWPW2
AZI2
VPS35L
TXN2
IRAK1BP1
IST1
KLHL32
DPYSL3
WBP11
C12orf60
CALD1
C8orf37
TIAM1
CRNKL1
CFAP61
DEDD
CYCS
CHD1
TMEM222
CYB5R4
PPDPF
ANKRD36B
ZNF783
UFL1
MRPL24
INPP4B
AQP4
SPON2
DHTKD1
CCDC115
ZNF335
BOD1L1
H4C15
H4C14
RSL24D1
SLC17A5
SMAD3
DNAJC19
C11orf65
ASCC1
ANAPC16
ENG
MED18
IRF9
TAF13
ZKSCAN8
GTF2B
VPS25
GYPC
NMT2
DUSP12
SFXN2
ARL3
EXOSC10
MRPS31
TRUB2
COQ4
SF3B6
FAM228B
ARID3B
TPK1
DNAJC24
DCDC1
GTPBP10
CCDC124
RPAP2
GLMN
TAF3
MRPL45
RUFY4
ACOX3
TRMT44
VTA1
NMBR
SNIP1
DNALI1
TMA16
CCNI
SEC23B
THG1L
DHRS13
RAD54L2
FAM234A
IPP
PLCH1
UCHL3
COMMD6
UBE2L3
UBE3B
SULF1
INSYN2B
PLD4
FBXL19
NLGN1
SMPDL3A
PABPN1
CEP85
TMBIM4
PUM1
WDR55
ZNF518A
RPS26
OSGEPL1
BCKDHB
TBRG1
MED11
PARPBP
NUP37
GAR1
IPO7
ZNF345
LSM5
AVL9
PACSIN2
COG2
ATG101
ARL14EP
RALBP1
RNF144B
ZNF408
ARHGAP1
RNF6
AASDH
TIPARP
CIZ1
RFXANK
BORCS8
KBTBD3
AASDHPPT
SAYSD1
PEAK1
HMG20A
ZNF589
GPATCH4
JOSD1
C6orf118
GTPBP1
GBX1
PBX3
KLF16
SRSF7
VPS13B
GPAM
MAST2
FBXO22
HDAC8
HMGN4
MYO18A
CFAP410
WDR62
THAP8
POLR2J3
OPA1
NSA2
GFM2
ZNF582
R3HCC1
CFAP20
WDHD1
SOCS4
ATG9B
ABCB8
ELFN1
ASCC3
CORO2B
TAFA3
PPM1J
MRPL21
IGHMBP2
HACL1
BTD
MRAP2
EIF3E
ZBTB45
QRICH1
C2CD5
PSMD6
CSDE1
TM2D1
FDXACB1
C11orf1
MRPS35
PGM1
TMEM59
RIOK1
CAGE1
INTS5
INO80C
SUGCT
MPLKIP
ZNF3
GMEB2
EIF2S1
ATP6V1D
ACBD6
ZNF461
NUDT15
RNF207
ATL1
TNFRSF19
CCR7
TMEM138
CYB561A3
LRRC10B
MZT1
BORA
DPY19L4
ALKBH3
WARS2
MRPL53
LOC100421372
HSPA14
CDNF
SAE1
C15orf61
ALG10B
TOR1AIP2
TOR1AIP1
MTBP
MRPL13
SESN1
CEP57L1
RPTOR
C17orf50
UGGT1
HMGCR
LCA5
GPATCH3
PPWD1
CENPK
DRG1
SFN
CNIH3
MBOAT4
TEX50
GTF2H2
AARS2
SNX17
EIF2B4
STK32C
ZNF331
SIRT4
ZDHHC6
VTI1A
VPS52
RPS18
UFC1
SPAG9
B3GALT4
PDSS2
ESCO1
RIMBP3
RBM34
SCCPDH
DDX18
DNAJC16
CASP9
MRPL54
APBA3
CTH
NDUFA12
ZNF2
PPP1R9A
SNAP47
JMJD4
TMEM79
SMG5
MSL2
CCNT1
LTA4H
PCNA
MMUT
CENPQ
SUMF1
HMGCLL1
NDUFC2-KCTD14
NDUFC2
LTN1
MTRES1
RCAN2
C16orf92
LTF
ZNF529
TYW3
CRYZ
SHC3
FITM2
SPATA7
NUDT5
CDC123
GASK1A
TMBIM6
RARRES1
PCDH9
ZNF362
TNRC18
ASB13
CYP17A1
SMU1
PSMD3
ZKSCAN2
CACNG1
GCLM
FAM71E1
EMC10
EPN1
GSR
SETDB1
PAAF1
COA4
SULT1C4
CDK7
DYNC2LI1
PSMC4
RCCD1
CYP27B1
METTL1
EEF1AKMT3
RNF182
FANCI
UQCC1
NEK2
MDM4
WDR5B
ZNF184
DCUN1D5
FBXL17
TMEM33
PPIL3
NIF3L1
GCFC2
CNTRL
C5
ZNF839
BCL9
RBM7
C11orf71
LYRM2
EIF2S3
SYMPK
FOXA3
ZBTB8B
TMEM62
SEM1
FAM133B
MRPL3
HIP1
ARHGAP19
PIKFYVE
IPO13
SLC39A6
C15orf40
ATP5MF-PTCD1
ATP5MF
PLAC8
WNK1
BBS5
KPNA6
WDR4
ST6GALNAC2
DPH6
LMO7
ZNF577
KDM1A
HSD17B6
TEX46
HERPUD2
RAG2
IFTAP
PLEKHA3
FKBP7
MDP1
CHMP4A
CATSPERE
APC
TSG101
MLIP
RBM33
H4C8
COPS7B
FBXO38
NDUFS3
KBTBD4
MRPL42
YTHDC2
CUL2
TTC14
PYCR2
COX18
NSUN4
ETFDH
C4orf46
KIF15
KIAA1143
NOXO1
GFER
NOLC1
IMPACT
NDUFB2
ARHGEF4
COX14
BCAR3
C18orf21
SMAP2
PPA2
PPP4R3B
MRPS16
SNX5
MGME1
AKR1B1
TNFRSF10D
IFNAR1
SLC25A19
TXLNG
FAM161A
DUS3L