ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◣ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
ZNF503
TAOK3
SUDS3
IPO13
PSMG2
CEP76
POLR3F
DZANK1
CACTIN
VTI1B
DUX4
FRG2C
NVL
NUP205
S1PR4
NCLN
TBCK
AIMP1
HADHB
HADHA
FAM187A
EFTUD2
CCDC103
LOC102724770
DGCR6
NUP85
SRD5A1
NSUN2
POLR2E
GPX4
RPL21
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
MIF4GD
GGA3
HSPA9
ID2
HOXA1
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
S100A10
BBS9
GOSR2
VARS1
MRPS5
ZNF576
IRGQ
RARB
UPF2
TSN
PSMD12
PAK1IP1
C6orf52
PDE6B
RPS23
ATP6AP1L
DPH6
ATP5MG
GOLGA5
DAPL1
C19orf48
CAPRIN1
SFI1
EIF4ENIF1
RPL35A
IQCG
LMLN
SMC2
SEC61B
PES1
TTC8
RBKS
BABAM2
SOAT2
IGFBP6
PI4KB
NNAT
BLCAP
TM9SF1
IPO4
TSSK4
COMMD1
CCT4
COX7A2L
RBBP5
SUPV3L1
ACTR10
PNO1
TMED1
NDUFA4
USP1
ZRANB2
LYPD1
SART3
ISCU
PKDCC
RBPJ
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
PIP4P1
OSGEP
APEX1
NFIA
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
MOBP
XPNPEP3
ST13
DNAJB7
PPP1R1B
SLC22A2
UFM1
IL23R
ARL4D
ZFHX3
RPS27A
CLHC1
FRG2
PROSER1
NHLRC3
MRPL11
SYBU
PCBP1
CLGN
CBX4
HSPA1B
SCNN1A
LTBR
PTK2B
C12orf50
C12orf29
RPS12
ZGPAT
ARFRP1
ZNF608
LRRN4
MAGEA11
NEO1
CDC42EP3
CYP26A1
CREB5
PDE4DIP
METTL24
SF3B3
COG4
PAF1
MED29
OPA3
NSUN6
ARL5B
CCDC33
FOXP2
PXDNL
PDE12
TLE2
PTGES2
KCNN4
BARHL2
VANGL2
KCNIP4
NR2F1
HEXIM2
HMGCS2
RBMS3
CITED2
C6orf47
BAG6
APOM
MEOX1
USP29
GATA4
HOXB1
GABRB2
MRTO4
EMC1
MYRIP
HEY2
SIRT4
GADD45GIP1
VIP
MBD2
OR6B2
NDUFA10
OTUD7B
EIF2S3
RBFOX1
ZFHX4
METTL3
SCMH1
ACOT2
STON1-GTF2A1L
MTRNR2L1
ST7
MSX2
SLC30A4
HBD
HBB
RPS29
LRR1
SUCLG1
CCDC200
BANP
ZNF585B
ZNF383
DIAPH3
ELF3
ZNF746
POP5
HES1
ARHGEF10L
LAMA3
NEBL
TMCC1
ARHGEF38
TAAR2
CDC73
STIL
GSTT4
CABIN1
SKIL
SEMA3E
ST18
HMX2
BUB3
LARP7
SYNE2
TNK2
FAM118A
MAPK10
RPL7
RDH10
NFKBIL1
DDX39B
ATP6V1G2
DMBX1
HAPLN1
BNIP3
TPM1
TMEM107
LAMB1
EPHA8
HOXC6
HOXC4
HOXC8
PAH
ASCL1
HOXA3
HOXA4
HOXA5
CACYBP
TNRC18
PDHX
APIP
KAT6B
LIN28A
RARA
FREM2
BHLHE40
TMEM9
GRHL1
MACROD2
CHODL
SEC11C
TBX2
ZBTB25
ZBTB1
TXNRD1
ANK3
IL12RB2
TBC1D9
ZNF652
ARHGAP11A-SCG5
ARHGAP11A
MVB12A
TYRO3
BST2
ZNF407
GORAB
PIN4
PCBD2
OAZ3
CPB1
SMAGP
FMN1
FOXP1
SERTAD2
MET
TTI2
KIF16B
PCDH15
PLD5
LCLAT1
CDS1
RPP25
MGP
PRUNE2
CNPY2
MKRN2OS
MKRN2
GTF3C4
DDX31
ARAP2
GTDC1
TMC7
EPM2A
ARHGEF3
ZNF827
BAMBI
ITGB8
SPCS1
GLT8D1
ERFL
USP44
ALKBH5
TCP10L
IL20
ZNF367
CNR1
NDUFB3
FAM126B
FRRS1
LRRFIP2
ATG4C
SHOX2
RSRC1
CXXC4
ATOH1
GPR108
TRIP10
PDZRN3
RPS10-NUDT3
RPS10
USP17L13
USP17L17
USP17L15
CLDN14
OAS1
NDUFS7
LMOD1
SHMT2
SCML4
TAF9
RAD17
AK6
ETFBKMT
RPN1
LYPD6B
ARF1
METRN
ANTKMT
GFRA1
SMURF1
AGO1
TNFRSF19
ZNF395
ANK1
C6orf163
NLGN1
ABCB4
CDH18
CLECL1
METTL25
CCDC59
MYZAP
GCOM1
ZNF285
KDM3A
INKA2
MNT
SPAG17
ATP1B1
DNHD1
BCAS1
RBM20
RARG
ACKR3
HCAR3
HCAR2
ASXL3
SSPN
WDR74
STX5
DONSON
EVX2
DHRS3
TIGD1
EIF4E2
TMEM242
GABRA6
RAB11FIP1
TMEM70
ELOC
CLNK
SCAMP2
BNIP2
SPIN1
GEMIN2
ZNF341
KDM2B
MIER1
DNAI4
TMEM106B
PRTG
SALL3
COL23A1
ELOVL5
ID1
KRTAP23-1
SLITRK6
ZASP
SAP25
MRPL34
DDA1
ABHD8
HAND1
EIF3D
B3GNT5
MAGEB3
MAGEB2
EFNB2
ATP13A3
MAPRE1
MEIS2
ABLIM3
SNCG
MMRN2
POGLUT3
MYO1B
PKIG
TFAP2B
SLC25A53
FAM199X
DIPK1A
NDST3
RUNX1T1
DENR
SOX14
CFAP69
SCOC
STK36
RNF25
OTX1
PTCH1
COMMD10
PEX14
DFFA
KMT2A
CADM3
RPS24
POLR3A
PRDM10
TMPRSS11F
LIX1
MCU
REC8
BDP1
RABGAP1L
PARD3B
SLAMF8
ARSF
CTF1
BCL7C
GGA1
UNC93A
ELOVL6
ATXN2
SLC25A6
ACOT1
SEMA6D
LMO1
ITGAV
NEFH
TEX2
MMD
UBE2I
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
REL
ECEL1
BRWD1
RPL22
RNF207
SEPTIN2
HDLBP
IPMK
CISD1
ACSS3
IGF2BP3
COX5A
OSGIN2
BCAT2
ANGPT1
NELFA
KAT6A
SYTL1
FGD3
BTNL9
SFRP2
ZNF397
USP34
APLN
RGS8
KLRC3
UNKL
C16orf91
NXPH4
EOMES
TCF7
PRKD1
STATH
KDM6B
KMT2E
ADM
SHB
RIN2
LYPD6
GJA10
PLCH1
ARID3C
DCTN3
MAB21L2
CLDN9
H2BC5
H1-4
CLDN6
TSPAN3
ABAT
IL17B
C1orf105
CALM2
ZBTB40
NKX2-6
PIGC
MIGA1
ANKRD6
ZNF385B
DNAJB1
ABI2
LCA5
VPS33B
AFAP1
LOC389199
DOT1L
SIGIRR
AP3D1
ARHGAP10
HUS1
RPLP1
YTHDF2
ANAPC15
ADAMTSL4
SRSF11
LRRC40
LYN
NRXN1
CBWD5
CBWD3
CRABP2
ZADH2
TSHZ1
SMARCD2
MYADM
SIGLEC15
KLF5
SVOPL
TRPM7
IGFBP2
PDHB
EBAG9
DNMBP
RBBP8NL
ACOT6
SPATC1L
EMP3
SNX1
CIAO2A
KCNK2
TPRA1
DACT2
KRT8
KRT18
MLIP
ILF3
CCDC174
PHIP
ZNF507
CS
ZC2HC1C
ACYP1
BOD1L2
IMMP1L
ELP4
PDE4D
MRPL52
SLC7A7
THOC6
HCFC1R1
BICDL2
SLC2A9
PDCL3
LOC100287896
LIPT2
PXMP2
POLE
FAT2
STX19
PHC2
NKX1-1
KANSL3
FER1L5
ATXN1L
ACY3
PHB2
NT5C2
CPNE6
CIPC
TACC1
ATXN7
PCLO
IFI16
PYDC5
SSBP2
HSPA4L
BEND7
MUC20
ADGRL2
ZBTB17
STARD13
NEK1
CLCN3
OTUD4
GARRE1
SYNJ2BP-COX16
SYNJ2BP
NBEA
MAB21L1
RNF10
COQ5
RYR2
RPL34
LMO4
DMAC1
UFSP1
ACHE
UXS1
ZNF157
SATB2
DUSP9
EIF4H
GVQW3
TMTC3
CEP290
CCL28
TBX3
GADD45A
KCNC3
VSIR
MGST1
DDAH1
CCN1
CTNNB1
NR2C2
TANC2
HNRNPD
ZDHHC17
ACBD6
SERHL2
KANK1
RILPL1
ACTR3B
EXOC2
USP17L21
USP17L20
USP17L12
USP17L22
PRR13
CDKL2
FAM168B
FANCL
POU2F1
VPS26C
TMSB4Y
RPRM
TMPRSS12
SH2B1
HNRNPA2B1
CBX3
MTF2
UROS
BCCIP
ANO1
VEPH1
CEP70
PRKAG2
SLC40A1
FGD5
TLE4
CYP51A1
TCHP
DAG1
ESRRG
CDK20
COL21A1
DLAT
SRGAP2
NEUROG1
POLR2J3
RALB
ARSB
KCNH1
PPFIBP2
HOXD3
GTF2IRD2
LSM8
NRDE2
SORBS2
ZNF844
SLC10A5
IMPA1
NCBP3
TAP1
PSMB9
YEATS2
FZD8
SMUG1
TMEM259
CNN2
MELTF
KLHL32
TMEM270
KCNS3
METTL27
PLOD2
CBWD6
CNOT10
SELENOS
PTGES3
RASSF4
TMPPE
GLB1
TIPIN
MEMO1
EML5
BCAS2
BICRA
GOLIM4
GPRC5A
CCNC
JAK1
RASSF6
TCF4
BAG2
MTMR10
RTL6
TAF1A
PALLD
C2CD5
GRIN2C
URM1
PCTP
PEX2
PRXL2A
KCNN2
GGH
STX18
MTMR2
MPP5
CHD7
EYA1
DIO2
PSMB5
CCDC102A
ADGRG5
ZEB2
RFPL1
UBE2V2
HMGA1
TNS3
SNX3
PXYLP1
RAB11FIP3
EID2B
EID2
ZBED9
GPR37
FRMD7
SPECC1
PHACTR2
ARHGAP17
SPRR2F
EPHA6
ID3
PLEKHG1
PIP4K2B
CYB561D1
ATXN7L2
RTN4IP1
QRSL1
NEUROG2
FOXJ3
SLC5A10
SULF1
USP12
LMNTD1
IFT22
FILIP1L
PLIN2
CMSS1
TSHZ2
FAM110A
PPP1R12B
COLEC12
PLEKHD1
SND1
NEK3
C6orf136
GNAS
RAB11FIP2
TAF12
CMTR1
ZNF384
FRMD4A
ARHGEF5
COX7A2
CFAP46
CATSPERG
USP17L11
USP17L18
USP17L10
TPCN1
CAPZA2
TBC1D5
BCAP29
PLS1
RYBP
EFCAB2
OTOL1
LUZP2
ABHD12
TTK
FAM162A
CCDC58
ARL14EP
EXPH5
GINS1
SPP1
GATA6
SCAP
VWA8
LRRTM4
PPP2R5A
IFT88
PELI2
ZNF697
ZSCAN12
SBF2
RAI14
PPP1R13B
TXNDC11
EAPP
SEMA4B
KMT5C
RPS3A
HMCN2
DRAM1
NTAN1
NUTM2E
EIF5
TMEM167B
ERCC6L2
MRPS36
PIGU
WDR11
FDFT1
REV1
OR5A2
CEP41
CARD10
RHOBTB1
HEBP2
CA12
SKAP2
PIK3R1
MANEA
FSTL3
ADH1C
ADAMTS7
RAPGEF3
C15orf61
SLC48A1
SMARCAD1
NR2C1
KIF22
FNDC3A
ZG16
CRKL
ANKRD36C
MGST2
JMJD1C
GDF6
ATP6V0A4
NT5DC3
RPS5
TLE6
NEUROG3
WNT1
DUSP29
ICMT
HES3
MBTPS1
CDX2
NOTCH2NLC
VEZT
FGD6
NOTCH2
G6PC2
PMAIP1
ZP4
SERINC5
PALM2AKAP2
PLAGL1
GLRA1
LBX1
LZTS1
NEUROD1
DUSP6
INSM1
LEFTY2
ETS1
NHS
ADNP2
RHBDD3
EWSR1
HOXB3
NBAS
CDCA7L
FXYD2
ADAM18
ITGB6
DLL4
ANKLE2
PHOX2B
UNCX
DLX4
TMEM120B
MAMDC2
PRRX1
SEC22B
MSX1
FABP7
MYLK4
SP5
CERCAM
ANK2
FGF19
NFE2
LRATD2
NAV3
ARID3B
ME3
FAM222A
RGS12
CNTN1
MALRD1
TRIM65
MRPL38
SMPDL3A
ERRFI1