ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX391683 | CD34 Hematopoietic stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◣ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

HTR5A
RAB37
GTF3C3
PDE11A
DMAP1
C3orf14
NUF2
FRA10AC1
TBC1D19
INTS12
GSTCD
IQSEC3
KCNH1
MED23
SRRM3
TOP3B
XKR7
SKP2
LMBRD2
KCNJ15
MRPL44
EIF2D
RBBP9
ANK1
RAD54L2
CASS4
COX16
NPAS4
PUM1
CPLX2
MRPS31
KIAA1549
MRPL21
IGHMBP2
RPS7
PLEKHM3
USP30
BSDC1
HES3
DCAF10
RBBP5
TRIP4
TMEM242
ALG10B
PEX3
ADAT2
MTERF4
MTF2
SELENOH
STAC
GDPGP1
CIB1
ELOVL2
SAR1B
SEC13
MNAT1
RABGAP1
BNIP1
AURKAIP1
COMMD2
R3HCC1
GLRA1
DRG2
RPL37
FAM98B
NCKAP1L
YWHAQ
IPO4
CDK5RAP1
DUS1L
TPD52L1
TGFBR2
DCP1A
GTF2H2
DLC1
TCF7L2
CEP72
TACO1
DPY19L4
M1AP
TTC4
XKR4
GTF2H2C_2
GTF2H2C
PIP4P2
CHGB
VSTM1
NEMF
N4BP2L2
CUL5
ZNF391
TMEM222
CRH
POLR3B
CBX1
RABEP1
LSG1
SLC37A2
GFM2
STX18
TTC32
SNAP25
VTA1
NMBR
ATR
SLC24A1
FAM227B
DTWD1
YAP1
CAMK1D
TEFM
ACSL6
CCDC130
SSBP1
CASC3
DNAJC6
RPL27
NEGR1
COPS7B
ALKBH3
FAM160B1
PRELID3B
STEAP1B
SMU1
C17orf75
ZNF770
OPA1
PXK
SLC44A1
SPAAR
TSFM
SFT2D3
MRPL39
GDPD5
SCGN
GBA
FEM1C
VPS13D
OPRM1
HMGB1
USPL1
KLF14
BAAT
SLTM
SNAP47
JMJD4
CPNE4
PRPF18
ADRM1
SLC8A1
ZNF117
CCDC88A
ALG10
NMNAT1
LZIC
PAFAH2
PPP6C
RHOT2
CLK4
PDE1C
ZMPSTE24
KANSL3
TDP2
ACOT13
TPM1
RPS20
NDUFS7
MRPL3
THSD7A
ACOX3
TRMT44
POLE4
FSIP2
PPP1R3C
AKAIN1
RTTN
EPS8
STX16
ITGB3BP
EFCAB7
SLC25A51
CALB1
TMEM41A
B4GALT7
TMCC3
NR1H3
ACP2
SLITRK1
GNAL
DSTYK
PSMF1
JMJD1C
REEP3
RPS14
LARS2
ANGEL1
CTNNB1
BMS1
SCG3
CAMK2G
R3HDM2
GRIA2
TRMT5
SLC38A6
EEA1
NME1
CCDC97
RABGGTA
DNAJC24
DCDC1
EIF3E
VWA8
NTSR2
CLVS1
CSGALNACT1
GPR78
CAPS2
NOXA1
ERCC6L2
SF3A3
PDHB
MMP7
NUP54
DRAP1
C11orf68
METTL9
NXPH3
WDR31
FRG1
RPS29
GLTPD2
MAN2C1
PPIP5K2
TARS2
MEX3C
DNAJC25-GNG10
DNAJC25
COQ2
HNRNPA1L2
MED4
SAMD4B
ATP10D
RAP2C
MRPL40
HIRA
INO80C
MTMR6
ITGA4
SUGT1
DERA
CCDC50
UTS2B
AAR2
PSRC1
SREK1IP1
CWC27
ZFPM2
CBWD5
CBWD3
HUS1
CBWD6
WDFY1
SYTL4
GGACT
CPA6
PRUNE2
DUSP6
MARCHF4
STOML2
C11orf49
NECAP2
TMED1
EXOC2
SCNM1
LYSMD1
PPM1H
ZNF579
TTC26
DDX18
NCOA7
FAM207A
GEMIN7
DISC1
FGFBP3
ASF1A
MOB4
TMEM68
TGS1
DGKZ
WDR36
SMIM13
CTHRC1
RNF6
YBEY
MCM3AP
NDUFC2-KCTD14
NDUFC2
PDCD6IP
TSPAN10
NPLOC4
NDUFA4
EIF5A2
ADNP
EDN1
RUVBL1
ATXN7L2
TRDMT1
PLCL2
TFPT
PRPF31
ITGA7
TVP23B
ANKRD46
HOXC5
SNRPB
POLR1F
FUT10
ALDH1L2
MRPS14
DDX1
ANKRD40
ZNF829
ZNF568
MRPL30
MITD1
FAM133B
ANKMY2
SESN1
CEP57L1
FAM221A
CA2
SNX19
GLIPR1L2
AGK
PHF21A
SECISBP2L
ZNF212
CDKN2AIPNL
C12orf73
GPT2
EIF2B3
ZFP30
POLR3E
TNFAIP8L1
MAPK1IP1L
TOR1AIP1
TRAM1
PDE4C
NMRAL1
HMOX2
NBEA
MAB21L1
PDE7B
KDM3B
GARS1
SAAL1
ACSF3
RPL5
ZBTB40
KLHL20
L1CAM
LUC7L2
FMC1-LUC7L2
FMC1
SLC35A3
GTDC1
WDR11
NCBP3
OTUD7A
ARL8B
ANKRD18B
DHRS7
METAP1D
RFX7
AARS2
CXCL2
VIRMA
CBWD1
MRPL58
BIN2
KNL1
STAT3
PRMT3
SNRK
CENPV
MRPL16
PPP2R5B
KCTD6
ATP5MC2
PCSK1
BTG3
TTLL12
ZNF426
POMP
TAMM41
EPHA3
PET117
KAT14
GEMIN5
TPM3
SNAPC3
NBN
ZSCAN12
CDC73
GOT2
TOMM20L
BTN3A2
FOXN3
ANKAR
ZNF501
TAB1
ACBD4
GPR3
PLCD3
NXPE3
CEP85
METTL25
CCDC59
CRBN
ZER1
ZNF609
SMAD5
TMEM60
PHTF2
MRPS18C
HELQ
TRAF6
RAG1
MAOA
EEFSEC
EIF1AD
BANF1
KMT2D
STXBP3
TINF2
C10orf88
ZNF114
MTPN
LUZP6
PTPRCAP
SVOP
CCNF
ATF7IP2
SNRPB2
MTIF2
BCL9
ISM1
WDR24
CACNA1G
CYP17A1
CD47
WDR41
FOXJ3
UTP3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CCDC92B
TDRD7
C8orf37
COA6
TMTC2
CXCL3
AGO1
BRF2
ZFP41
INTS5
VANGL2
RHBG
ILF2
TMEM70
EPS15
SPEF2
NFAT5
ARAP1
SDHAF3
RPS15
LGALS2
ZC3HC1
SORBS1
CHCHD6
ANKRD34C
CFAP298-TCP10L
CFAP298
ZNF280D
VPS72
SPDYA
MTERF1
SLC7A6
PRMT5
SNX1
VAMP4
COMMD4
SYNPO2
OR1E2
NDUFAF5
ESF1
GSTA4
SLC35B1
ZNF148
ROBO3
GDAP1
STEAP2
ZPBP
PSTPIP1
RBM45
SLC35E3
FIS1
NOC3L
SCN9A
C20orf194
C7orf26
ARMH3
PDE4DIP
MLEC
SRP9
SLCO4C1
STAU1
DDX27
CCDC150
SMAP2
F8A3
F8A2
F8A1
EIF3F
TRMT2A
RANBP1
PPA2
TBPL1
ING3
MAIP1
RBIS
SLC38A2
TUBGCP3
RPTOR
NOTCH2
KMT2A
NDUFS3
KBTBD4
CCAR2
RAD52
COMMD1
GNG2
BACH2
ADD2
PCID2
CUL4A
JRK
GTF3C5
ATP6V1B2
SST
MPPED2
TPH2
YPEL3
TIGD1
EIF4E2
EDC4
NLE1
TMBIM6
CRLF3
BBS1
ZNF292
WDR55
CHD1L
PRKAB2
GPAM
RARS1
WDR47
TIA1
ITGAL
SMARCD1
CEP164
CNTNAP5
LRRD1
ATP1A1
WARS2
PHIP
VPS4A
MAPK8IP2
MAGOH
NFE2L2
ADARB1
CD274
CLTC
PSMD6
RNF103-CHMP3
RMND5A
TATDN3
NSL1
CSDE1
ZNF138
HS3ST2
KDR
SLC39A13
SEMA3D
SF3B6
FAM228B
SLC45A4
NRF1
RIPOR2
MRPL48
FAM25E
GEM
TMA16
UCHL3
COMMD6
MAPKBP1
AKAP13
TRIM16L
FGFRL1
SYP
GRM1
RTN1
TUT7
AGBL2
P2RY6
TXLNB
ELP1
ABITRAM
TRAPPC5
MTBP
MRPL13
GPR62
SLC39A3
SHF
KRAS
CYP20A1
NLRP1
PLEKHM1
DTD1
CHRM4
ATP5MC3
MYOCD
B4GALNT1
ALDH9A1
METAP1
KCNK12
RETSAT
ELMOD3
CHRFAM7A
MFAP3L
SNX17
EIF2B4
PTCD1
CPSF4
RBMS3
ZFP62
SCNN1G
CEP85L
CT45A7
CT45A6
CT45A3
TTLL4
CACNB3
CT45A10
DQX1
CPE
SMG5
INPP1
KDM1A
MAF1
PNPO
EPHA10
CPPED1
SMIM8
NSFL1C
STMP1
U2SURP
GRAMD1C
MTR
PDCD2
KDSR
LRRC10B
ZNF562
SLC33A1
CCNC
ZNF518A
TBC1D13
LIG4
ABHD13
PKIB
HNRNPH1
LIG3
CLUL1
KAT6A
TTC37
ARSK
BARHL1
UNC80
KIF21A
F8
OGT
TPK1
MEGF8
PSMG3
REXO4
RPP14
HTD2
HPCA
DPYD
IL12A
RPL38
TRMT61B
POLR2C
CSRNP1
CHSY3
SEZ6L
RIF1
STAT6
OTUD7B
PRKG2
FAR1
EPDR1
SNTG1
DNAJB12
CLASP2
ZFYVE9
ZNF827
TEX261
TMEM101
GPR37
HIF1AN
MRPL1
KDELR1
METTL8
DCAF17
TFAM
QDPR
RNF146
RGPD5
PLK1
RGPD6
RGPD8
CENPVL3
ZSCAN25
GCFC2
FAM118A
CEP57
FAM76B
SMARCD2
SETD1A
CEP41
TSGA10
C2orf15
ZZZ3
VPS13C
MC5R
DDX46
SURF6
PRSS27
DEFB124
PDGFD
IRF9
ABCA3
TMEM170A
FAN1
ITM2C
CADM2
DLST
CLUAP1
NARS1
ABRAXAS2
CLTB
KITLG
SIGLEC6
TMEM30B
LTN1
VRK2
ZNF554
B3GLCT
MTRES1
SLC26A4
NHEJ1
MICAL3
RERG
FABP6
FAM50B
MARCHF7
PTPN4
NEUROD4
ARHGAP22
LONP2
ABCC11
TMEM43
CHCHD4
DCP1B
SRFBP1
ARHGEF12
COX8A
NELFB
BHLHE40
FBXO22
IL11RA
EI24
ARHGAP30
ATG101
UCHL5
RO60
PHB2
WDR70
MAP2
SFSWAP
PSMD3
OXR1
STX8
CFAP52
MKRN2
PGGT1B
PCDHGB6
RAB23
GCLM
PRRC1
YARS1
S100PBP
ADAM32
CALCRL
TRPC4AP
PJA2
LRRC6
SACM1L
CYB5R4
C19orf48
DNAI3
SLC2A4
SYPL1
PRICKLE1
GFI1B
TSC1
DDX50
UGCG
DNM3
COX19
STMN3
ZNF846
NGDN
C9orf40
RHOT1
CRACR2A
ZSCAN30
NFYB
ZNF730
CHMP7
ANKRD54
PCTP
KCTD18
SNRPD1
TDRKH
DET1
B4GALT6
HLA-E
GPC5
AQR
CAB39L
LCA5
INO80D
TCTN3
CADPS
SELENOT
SLC11A2
ATG5
JAKMIP2
CDK5RAP3
TCAF2
ADPRS
ANKRD36B
LONP1
CATSPERD
RAB30
TCHP
DR1
UBAP2
TPBGL
ALG14
DPP9
TMEM167B
RNF214
PCSK7
TANC1
LTA4H
VPS13B
HDAC1
RSAD1
MRPL42
PIGC
SPEN
FAAH
TRAM2
GOLIM4
PCBP2
MTOR
PDE8A
BTC
GRPEL2
CHRNB2
BCAR3
GFM1
SPINT2
IL17D
FBXW8
ELMO1
RAVER2
CRKL
ORC4
MBD5
RESF1
WIZ
FBXO31
ACBD6
ARHGAP24
ERI1
DCLRE1B
AP4B1
ZCCHC4
RILP
TMEM216
ZNF76
ANKRD36
U2AF2
TRIM45
LRRC59
SMIM12
ANTKMT
DROSHA
C5orf22
FABP5
CCDC69
BCKDHB
LNPEP
SCD
SNX12
CLPB
MMAA
PDS5A
MARCHF11
MAML1
SUGCT
MPLKIP
MRPS15
POMZP3
CDC6
ARL6IP1
TRIP12
FBXO36
FXN
CD300LF
C7orf25
SPRYD7
THOC2
EIF3G
MTG1
CYBRD1
GNB2
BUD13
ANKRD36C
PLEKHG4
RPS6KA6
NUTF2
CENPT
CGRRF1
TET3
STEAP1
TXNRD1
HSPE1-MOB4
HSPE1
HSPD1
NSMCE4A
NDUFAB1
KPNB1
SFR1
ACCS
ASNS
RPS3A
FUT3
CEP120
GALK1
SCAF8
ZNF354C
SEZ6
GMDS
SLC19A2
SLC27A4
DNLZ
LINGO2
DYRK4
MAP3K2
ZNF561
ROM1
EML3
TUT1
C2CD5
NUS1
NCOA3
CYP4V2
CNOT6
NCAM2
SPECC1L
AP5B1
B3GAT2
STXBP5L
SIRPA