ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584313 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◣ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PSMD1
LOC102724770
DGCR6
IPO13
RABL2A
RWDD1
RABL2B
VDAC2
ZNF335
CACTIN
MAPKAPK5
TAOK3
SUDS3
POLR3F
DZANK1
DYNC1LI2
NME6
DUX4
HSPA9
NUP205
NUP85
FRG2C
VTI1B
EXOSC5
BCKDHA
C19orf48
RPL21
FAM187A
EFTUD2
CCDC103
POLR2E
GPX4
PSMG2
CEP76
S1PR4
NCLN
NVL
TBCK
AIMP1
ZRANB2
STAM2
GOSR2
MRPS7
MIF4GD
GGA3
SRD5A1
NSUN2
TLE6
FARSB
NNAT
BLCAP
PES1
LYRM4
FARS2
ATP5MG
CAPRIN1
STAM
TSNAX
DCTN1
REXO1
ACTR10
SEC61B
SKP1
UPF2
SUPV3L1
PNO1
GOLGA5
DPH6
RPS23
ATP6AP1L
RABGGTB
HADHB
HADHA
RPL35A
IQCG
LMLN
TTC8
UFM1
RBBP5
ZNF576
IRGQ
PSMD12
PI4KB
SLC35B1
ADK
AP3M1
VARS1
ICE1
PAK1IP1
C6orf52
USP1
NDUFA4
SFI1
EIF4ENIF1
ANAPC7
SMC2
ZNF503
HOXA3
HOXA4
COX7A2L
TSN
SART3
ISCU
PDAP1
BUD31
MRPS5
TMED1
SELENOF
HS2ST1
RPS27A
CLHC1
MRPL11
PROSER1
NHLRC3
FRG2
PCBP1
PIP4P1
OSGEP
APEX1
C6orf47
BAG6
APOM
SF3B3
COG4
FAM104A
C17orf80
UBE2I
RPS12
TLE1
HSPA1B
NOTCH2NLC
NOTCH2
XPNPEP3
ST13
DNAJB7
RBKS
BABAM2
NFKBIL1
DDX39B
ATP6V1G2
ARF1
PAF1
MED29
DMRT3
RND3
RPS29
LRR1
BICRA
ANKLE2
EIF2S3
TM9SF1
IPO4
CCDC200
COMMD1
CCT4
NEUROD1
ABCG2
NFIA
PIN4
KITLG
ARL4D
PLAGL1
WNT1
POU2F2
TMEM143
SYNGR4
ARHGAP11A-SCG5
ARHGAP11A
PARP11
LRATD2
PAX3
ITGB6
OR6B2
NDUFA10
RPL7
RDH10
MSX1
RAB11FIP1
PDE1A
SUCLG1
RHBDD3
EWSR1
MUC20
HOXA1
HOXA2
ARHGAP22
PPP1R1B
SEC11C
GTF3C4
DDX31
TMEM120B
NCOR2
CITED2
SEC22B
TAF9
RAD17
AK6
GRIK2
FGD3
GADD45GIP1
RPL34
PTGES2
GJA8
MRPL3
ALDH1A2
LZTS1
LAMA4
ZFHX4
G6PC2
EVX2
ZNF285
NRARP
KCNK16
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FZD8
ICMT
HES3
SOGA3
PDE1B
GUCY2C
OAZ3
TLE4
NEUROG1
MRTO4
EMC1
C1orf105
USP17L21
USP17L20
USP17L12
USP17L22
WEE2
DENND11
HES1
PDE4DIP
PKHD1
ZFHX2
THTPA
AP1G2
CDC73
MYRF
MYH2
STK36
RNF25
SPRR1A
BRINP1
TMEM70
ELOC
CDPF1
HOXA5
SH3BP5
SKIL
SNAPC1
PIGX
CEP19
FOXP2
COL17A1
C10orf90
CNPY2
TMEM72
CHD7
HOXB3
DDAH1
CCN1
HOXB4
MEF2C
NEUROG2
GSX2
PAM
MTRF1
MSX2
FOXB2
PALM2AKAP2
RPN1
QPRT
TMEM242
NR2F1
LRIG3
CABP7
GLRA1
FGF19
SPTBN1
AGMO
ACSS3
HDAC9
ARHGAP24
VAV3
VIM
SMARCA2
TRNP1
ANK2
SGPP2
CLDN11
PIPOX
TRIL
UNCX
SLA
DHRS3
SEMA4D
CCDC9
ZNF585B
ZNF383
SPCS1
GLT8D1
PRDM13
MYLK4
USP17L13
USP17L11
USP17L18
USP17L10
SMUG1
PDE6B
FREM1
DPYD
LAMB4
ASXL3
RARB
ADAM18
TRIM65
MRPL38
SERINC5
ZNF608
HMX2
BUB3
GORAB
TPO
TRABD2B
ATOH8
BECN2
DAPL1
MED4
ID1
AXDND1
CD69
GALNTL6
TLE3
USP17L17
USP17L15
VEZT
FGD6
CBFA2T2
BNIP3
TNP2
PRM3
PRM1
RAI14
IKBKB
SH3RF2
WDR74
STX5
BTBD1
FABP7
SMPDL3A
HOXB5
SLC2A9
GMPR
C5orf63
GNG12
KCNK10
CTXN3
GPSM1
KBTBD8
ATP2C2
PDHX
APIP
GAS2L3
METRN
ANTKMT
ETS1
HSPA6
ATP1A4
WDPCP
PCBD2
SCGB1A1
CEBPA
PPFIBP2
CRYAA
CRYAA2
FMN1
CS
INSC
SDK2
SLC26A2
ATP6V1G3
PCDH1
TRMT9B
REC8
CEBPD
ALDH1B1
KCNIP4
TANC1
MRGPRX3
LRRC10
SLAMF8
DLG2
GALNT14
NELFA
FRMD7
RPH3A
ID2
ZGPAT
ARFRP1
CEP41
FMN2
FRMD4A
HMX3
NEUROG3
TSSK4
DUSP29
MBTPS1
CDX2
LARP7
ARHGAP10
PMAIP1
ZP4
ATOH1
PDE12
LBX1
IGFBP2
DUSP6
CCDC33
INSM1
BBS9
LEFTY2
NHS
ADNP2
ARID3C
TPM1
S100A10
UNKL
DCTN3
SOAT2
IGFBP6
URM1
NBAS
CDCA7L
FXYD2
C16orf91
TLE2
HOXB1
DLL4
PHOX2B
DLX4
ST18
PDHB
MAMDC2
PRUNE2
SYBU
ID3
PRRX1
ECEL1
TPRA1
RARA
SP5
CERCAM
RBPJ
MAB21L2
NFE2
NAV3
CDH18
KDM2B
ARID3B
TMEM107
ME3
CLGN
ZNF746
FAM222A
KCNN4
GATA4
MEIS2
HOXC6
RGS12
CNTN1
GPR108
MALRD1
MYRIP
ALKBH5
FOXP1
PAH
ASCL1
ERRFI1
RBBP7
GADD45G
METTL24
TRIP10
HOXC4
DSCAML1
MTRNR2L2
MSH3
DHFR
POP5
SP2
GRSF1
IL23R
DMBX1
EXOC2
IL17RD
ARSG
KDM8
RIMKLB
KAZALD1
NCOA7
MTRNR2L1
RUNX1T1
CR1L
PRDM12
KMT2A
HOXD3
NOTCH2NLB
NOTCH2NLA
TBX3
CYP26A1
OTX1
RASSF2
PAX6
ZNF652
BFSP1
IFI16
SH3BP2
MRPL34
DDA1
ABHD8
LPIN1
EVA1A
HOXC5
INAFM2
SH2B1
IER3
FLOT1
NDUFS7
NEK3
FGR
PKDCC
PYDC5
TCF7L2
SH3BP1
PLEKHO2
RFX2
MBD2
TMPPE
METTL3
GLB1
CBX4
FKBP1A
SPATC1L
DBX1
RNF149
PDP2
UPF3A
TMEM14A
ERLIN2
SULF1
OR10AC1
ABLIM3
PSMB5
LYL1
MVB12A
METTL11B
CACNA1D
HIP1
PRDM6
SPG7
VOPP1
HNRNPA2B1
CBX3
HUS1
HEXIM2
KDM6B
CMTM7
GTF3A
ETFBKMT
PANK4
HES5
LIN28A
ARID5A
TESC
MAGEA11
RPS10-NUDT3
RPS10
NEO1
SEC14L1
TMEM212
ZFHX3
EAPP
KCNAB2
JAK3
STK38
MYBPC3
NUTM2D
FBXL18
MRS2
PARK7
CADM3
HSPA1L
HSPA1A
VIP
TBC1D10C
PPP1CA
PHC2
TIGD1
EIF4E2
CCPG1
C15orf65
RPS6KA1
NOXO1
CHODL
TDG
SMC6
GEN1
C12orf73
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
NRROS
EMP3
NR1D1
PDZRN3
KAT6B
HNRNPD
PNKD
KMT2E
ATG16L2
KIF21B
POR
RPS24
POLR3A
HOXD4
UBXN10
RASL12
PLA2G2C
KBTBD13
GRHL3
LYPD1
KDM3A
PRDM10
PAX8
SLCO4C1
MBNL3
TAF12
CCDC88A
SNX1
CIAO2A
RASA4
SLC7A5
TBC1D8
SPECC1
ARHGEF10L
NADK
ERCC1
ACTB
CATSPERG
BRWD1
IER3IP1
ZSWIM6
IRF2BP2
CARNS1
LMO4
DGKZ
SNCG
MMRN2
KLF17
FGFRL1
RPLP1
HAND1
BIN2
ENO1
WDR6
NBEAL2
CCDC12
FOXB1
NKD1
SKIV2L
NELFE
PSTPIP1
EFHD2
FAM110A
MEOX1
RASA4B
ADM
NCOA2
REV3L
TMEM104
NAT9
SHOX2
RSRC1
MTMR4
ATP23
CAND1
TBL2
STIL
SMURF1
OTUD7B
DIAPH1
ZNF76
CCDC114
NBPF1
USP15
CAMTA1
CCDC102A
SLC39A7
RXRB
HSD17B8
PLEC
WNT10B
SNX3
NEK7
ING1
CARS2
LRRN4
TRAF4
MTRNR2L8
MEF2D
ASB6
AHNAK
VAV1
SH2D3A
GSTT4
CABIN1
MXI1
SOX21
NRXN2
HOXC8
ZNF775
RASSF5
LPCAT3
LNPEP
BHLHE40
RARG
IMPG1
ZNF740
CSAD
CPSF4L
NEBL
LIG3
DDX3X
DENND2D
PPP1R18
NRM
CDC42EP3
ZNF367
IRX5
CCDC174
DIAPH3
GGCT
IQCH
AAGAB
RPL17-C18orf32
RPL17
NFKBIA
CCKAR
HEBP2
CBFA2T3
ZCCHC3
GATA6
C20orf96
LDLRAP1
CD79A
MNT
ZFYVE28
CFAP99
ZDHHC1
DMD
CD38
BCL3
BNC2
POLD2
ZNF414
CPVL
CHN2
SKI
INAVA
CNOT2
TRERF1
RAC2
DTX4
ZNF718
ZNF595
CMTR1
TTC13
ARV1
PCNA
CDS2
TUBA1C
POLR2J3
TUBB
MDC1
SYNPO
IQGAP2
KHDRBS1
LFNG
SPACA1
SUPT4H1
SLC38A10
LRIG1
SCAMP4
ADAT3
RXRA
TYRO3
NDRG1
MYO1G
NTRK2
OPA3
LOC102724265
CLDN2
RNASEH2B
TPST2
CREB5
GPAA1
EXOSC4
MYO1B
PPIB
MINDY2
PTK2B
DCSTAMP
H6PD
SLC9A1
SIRT4
FTL
DISP2
PDPN
ADGRG5
GALNT10
KBTBD11
PKN2
DIPK1B
COL11A2
NDFIP2
MAPKAPK3
CISH
PLCB2
SMAD3
FOXA2
CDK5R1
AGTRAP
RYBP
GUCY1A1
USP3
CDX1
ADCY7
H2BU1
H2AW
ERI3
TRIM48
SHB
SEPTIN4
NKIRAS1
RPL22
RNF207
TXNRD1
MUC12
PEX14
DFFA
BST2
GFI1
MOBP
MYO1F
FAM120B
NAA10
ARHGAP4
KCNH2
CYP51A1
YTHDF2
SMARCD2
PKM
NAA80
IFRD2
HYAL3
PCTP
TMEM275
PRDM1
HESX1
ELANE
CFD
ZNF397
PPCDC
BAX
MRPS24
RABGAP1L
CYP2E1
SLC35E2B
PPP1R1A
NOTUM
NDUFV1
TBRG4
ARHGEF1
HNRNPF
KIF5C
CCND3
NR1D2
ADORA2A
COL23A1
RNF166
CTU2
CYCS
ADGRL2
TAF15
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
GSPT1
TMEM9
SP7
CRYBG1
CNTN4
DGAT2
ZDHHC4
BAIAP2
HMGCS1
ARIH2
SYTL1
SYTL3
MECOM
ABHD17A
CBWD5
CBWD3
SCNN1A
LTBR
TUBB3
MC1R
RNPEPL1
DUSP28
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
THRAP3
B3GALT5
SOD2
MDFIC
KCTD6
SEMA6D
CPT1A
CDC42EP2
PTP4A2
IL6R
PRSS56
CHRND
AKIRIN1
LAT2
KIF26A
SLC35E2A
ZFX
DHX16
ABHD11
KANSL3
FER1L5
CYTH4
EVX1
MYEOV
PDE4D
CLDN9
LRGUK
PTGES3
FOS
AGO1
PCDH11Y
NR2C1
MAGIX
MBD6
GAS7
DDIT3
TMEM222
FAM118A
FAF2
NECTIN1
C12orf50
C12orf29
SRPRA
RBL2
ARMC12
HHIP
STAT1
HNF1A
VGLL4
NXPH4
WT1
CRABP2
FCHSD2
SSX2IP
CTTN
PXYLP1
ZNF341
ELMO1
CXXC4
AHDC1
ATXN1L