ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584308 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◣ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
PSMD1
NUP205
LOC102724770
DGCR6
RABL2A
G6PC2
POLR3F
DZANK1
NME6
IPO13
RABL2B
NVL
CACTIN
RWDD1
TAOK3
SUDS3
RPL21
LARP7
FARSB
C19orf48
TBCK
AIMP1
NUP85
POLR2E
GPX4
HSPA9
PAK1IP1
C6orf52
VDAC2
SERINC5
MAPKAPK5
PES1
PPP1R1B
ATP5MG
FAM187A
EFTUD2
CCDC103
DUX4
S1PR4
NCLN
ANAPC7
SEC61B
ZFHX4
MRPS7
MIF4GD
GGA3
PSMG2
CEP76
HADHB
HADHA
GOSR2
ZRANB2
DCTN1
EXOSC5
BCKDHA
VTI1B
ZNF576
IRGQ
NNAT
BLCAP
PNO1
UPF2
RPL35A
IQCG
LMLN
STAM
LYRM4
FARS2
DYNC1LI2
ARF1
XPNPEP3
ST13
DNAJB7
ZNF608
STAM2
PI4KB
SART3
ISCU
NEUROG2
SF3B3
COG4
ADNP2
PCBP1
PSMD12
TSN
TMED1
SELENOF
HS2ST1
RPS27A
CLHC1
FZD8
CAPRIN1
NDUFA4
CDX2
RHBDD3
EWSR1
ACTR10
UFM1
RAB11FIP1
NBAS
ADK
AP3M1
SRD5A1
NSUN2
WNT1
RPS12
LBX1
FABP7
SMPDL3A
VARS1
ZNF503
NOTCH2NLC
NOTCH2
RBBP5
RPS23
ATP6AP1L
TLE6
SMC2
SUPV3L1
MRPL11
TSNAX
MRPL3
SLC35B1
PRDM12
ITGB6
ERRFI1
ADAM18
TPM1
EVA1A
ANK2
REXO1
SKP1
HSPA1B
TTC8
COX7A2L
DEFA5
PDAP1
BUD31
GLRA1
FGF19
RABGGTB
NR2F1
PIP4P1
OSGEP
APEX1
C6orf47
BAG6
APOM
PROSER1
NHLRC3
ETS1
UNKL
C16orf91
LAMA4
FOXP2
ARID3C
DCTN3
PIN4
ICE1
MYO10
DDAH1
CCN1
LRGUK
ARHGAP11A-SCG5
ARHGAP11A
PALM2AKAP2
FAM104A
C17orf80
RIMKLB
MUC20
MRPS5
GOLGA5
DMRT3
MYLK4
NAV3
DPH6
CHODL
LRIG3
TMEM107
PARP11
ME3
VIP
PAF1
MED29
TMEM14A
SFI1
EIF4ENIF1
USP1
RBKS
BABAM2
SYNPO
SYBU
NEK7
TMEM120B
PPFIBP2
NHS
ICMT
HES3
IGFBP2
PDHB
SEC22B
MALRD1
FEZF2
SOX21
PTGES2
FRG2C
DBX1
PLAGL1
DAPL1
RGS12
RABGAP1L
MOBP
ABLIM3
NEUROG3
TDG
C12orf73
FOXD3
PAX8
RPL7
RDH10
BICRA
PDZRN3
SMURF1
TLE4
MXI1
SOAT2
IGFBP6
RGL1
SEC11C
RFX2
ALDH1A2
VEZT
FGD6
ABCG2
SMARCA2
KCNK16
PHC2
CLDN11
ASXL3
ARHGAP10
UBE2I
LRATD2
NFKBIL1
DDX39B
ATP6V1G2
KRT20
MEIS2
ARHGAP24
PHOX2B
SPACA1
FOXB2
HOXA3
HOXA4
SUCLG1
TLE1
KDM8
NMNAT2
HES1
PDE4DIP
EIF2S3
LRIG1
GPR176
RPS29
LRR1
PCDH11Y
COMMD1
CCT4
ZNF585B
ZNF383
SEMA6D
CEP41
STK36
RNF25
CCDC33
LMO4
MRTO4
EMC1
ARHGEF28
OR6B2
NDUFA10
SCGB1A1
C5orf63
REV3L
C8B
URM1
FRMD7
HOXB1
CCDC88C
NUTM2D
MNX1
CACNA1D
ACSS3
TAF9
RAD17
AK6
TMEM275
TM9SF1
IPO4
TSSK4
VGLL4
BRINP1
LDHB
VCAN
CBFA2T2
USP29
AQP6
GATA6
HHIP
RAI14
GAS7
PRRX1
NEK3
B3GALT5
BECN2
CERCAM
KDM2B
SULF1
PGLYRP1
IGFL4
GADD45GIP1
ZFAND1
CHMP4C
ATOH1
MET
STARD13
FAM222A
METTL24
TLE2
ZFX
SUPT20HL1
PLEKHG4B
TEX2
STXBP5L
CITED2
FHL1
ALPL
SOGA3
WT1
CLEC18C
BFSP1
PKDCC
MED4
METTL11B
COL17A1
GORAB
NRG2
NCOA7
PSMB5
EVX1
KIF16B
ELMOD2
PPP1R1A
PCBD1
BNIP3
RPS24
POLR3A
IRF2BP2
BAIAP2
SYNPR
SALL1
TP53INP1
TPO
TLE3
HK3
BTBD1
CRYAA
CRYAA2
CNPY2
RPL34
RBP3
PITPNM3
ALKBH5
FGFR2
GGCT
TMA16
PJA2
DTX4
CNTN4
PLEKHA5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TBX3
SLC7A5
MTMR7
TTR
TYRO3
LMO1
PDE6B
TNFRSF19
CETN1
MAB21L2
CR1L
PPP1R16B
TESC
TPST2
GRIK2
LRRC1
SLA
OCLN
MOB3B
DMBX1
HNF1A
PKHD1
NPAS1
LZTS1
MSX1
GFRA1
SECISBP2L
FREM1
TANGO6
FOXB1
DIO2
TFAP2B
CLDN2
NEUROG1
PDE1B
NXPH2
EVX2
TRABD2B
FILIP1L
TPH2
PDE12
CDH18
RUNX1T1
PPP1R12B
MBNL3
DHX32
RXRG
GMPR
OAZ3
CYP26A1
RFX3
FRS2
DNAJA1
APTX
C1orf226
PIK3C2A
NEUROD1
NECTIN1
SLAMF8
CCDC198
SLC14A1
HOXA1
HOXA2
VOPP1
CATSPERG
GTF3C4
DDX31
HOXB3
DLX4
HOXB4
CD69
IL17RD
FRG2
KLHL7
ADO
TAPT1
RPN1
ELMO1
EFNB2
TRMT9B
GCSAM
ZPBP
CLGN
NCOR2
SLC10A2
SMIM28
CS
CADM3
TBC1D8
AGMO
METTL3
KLHDC8A
VSIG10L2
RARB
MDFIC
TCF7L2
HPCAL1
C8orf34
NID1
SP8
ERLIN2
NFKBIZ
ZNF367
CXXC4
GALNT14
PPP2R5A
HOXD3
PANK4
HES5
HOXD4
MEF2C
NOTCH1
CNN3
PRR16
PPBP
PF4
CXCL5
TTI2
ZCCHC13
SNAPC1
CPA1
SOX6
BAZ2B
EGF
BBS9
DIPK1B
CPEB2
CDC42BPA
BHLHE22
MBTPS1
SALL4
ADAMTS18
ATOH8
SNCG
MMRN2
UNCX
CTXN3
SLC39A6
ELP2
CDH16
TNNI3K
NOTCH2NLB
NOTCH2NLA
SCHIP1
SOST
ST8SIA3
ZFHX3
ECM1
HAPLN1
HOXC4
PRDM13
CEBPA
KRT16
PTGR1
DUSP6
CDC73
ADGRL2
CER1
HNMT
ARL4D
RBBP7
ID1
KIF21B
CAMTA1
PAH
ASCL1
ADM
SYTL2
RARA
ZDHHC1
ZNF214
NLRP14
RHOB
ZGPAT
ARFRP1
HAND1
PAM
FGD4
GATA3
CHD8
TCF4
THRA
GZMK
PARS2
KCNN4
TRIM65
MRPL38
GAD2
JAKMIP1
EPB41L5
OTUD6A
AWAT2
ST18
OR10AC1
ZFHX2
CLEC19A
OR5A2
OR5A1
PRRC2C
ABCA4
TMEFF2
CLEC18B
TMEM9
TCF12
EPB41L2
ABHD17C
AGPAT4
PCBD2
CBY2
SPG7
TMCC3
NINL
KBTBD8
NFIA
PRKCA
ZBTB2
LIMK2
NXPH4
SLC35E3
NUP93
TMEM132C
WRAP53
TP53
FOXP1
DACT2
RIC8B
CCDC169-SOHLH2
CCDC169
ZC3H12B
CUBN
ID2
RBM20
ZBTB38
AMBN
P2RY14
CCDC200
KMT2A
LIPG
ALG14
LIN28A
CCND1
GJA1
SPAM1
PDPN
WDR59
CD83
LMO3
KCNIP4
SOX5
TRIM2
PADI2
SASH1
TNRC6B
PDHX
APIP
ZNF746
HTR1F
MIER1
DNAI4
FOXA2
GUCY1A1
PHACTR2
TANC1
PGM2L1
HAAO
ALOX5AP
SSBP3
AJUBA
OAZ2
AIPL1
EIF1
ARSF
PIMREG
FLNB
CNTN1
SLC2A9
CFAP69
NEUROD4
CARD10
LRRC4
RIPOR2
TFDP2
CHD1
MXRA7
MAP2
DMRTA1
INSM1
RASL12
KBTBD13
LHX2
RAX
AXDND1
PMFBP1
DLGAP1
NDUFB3
FAM126B
LRRC10B
BMPR1B
MAGEA11
LDLRAP1
ARMC12
PCDH18
TWIST1
MBNL1
DAAM1
KCNN2
TAS2R9
TAS2R8
TAS2R7
ZNF385B
BNC2
FAM107A
ARHGEF10
SPON1
PCDH17
FRYL
ANKS1B
FAM171A2
AKAP7
ACBD5
CREB5
UTRN
TPRA1
REC8
LIN28B
GPC6
FERD3L
DMD
SOCS3
METTL25
CCDC59
IPO11
DIMT1
BMP5
CPA2
APP
CCDC141
FAM120B
GNB2
DLL1
ACTL6B
FHDC1
ERCC1
IGFN1
FMO3
H2BU1
H2AW
CDC42EP2
RPS10-NUDT3
RPS10
PON2
LCA5
FABP5
LAPTM4A
SH2B1
VANGL2
MAFA
RFX6
POU2F1
TNFSF18
PAX3
GALNTL5
RPL17-C18orf32
RPL17
ARID5B
CDK14
USP17L21
USP17L20
USP17L12
USP17L22
USP17L11
USP17L19
JDP2
FABP9
USP17L13
USP17L18
USP17L10
SHOX2
RSRC1
YAP1
ELAC1
PLAAT4
SVOPL
DUSP29
PMAIP1
ZP4
SKIL
WDR74
STX5
LEFTY2
S100A10
CDCA7L
FXYD2
DLL4
ANKLE2
MAMDC2
PRUNE2
ID3
ECEL1
SP5
RBPJ
NFE2
ARID3B
GATA4
HOXC6
TMEM70
ELOC
GPR108
MYRIP
GADD45G
TRIP10
DSCAML1
MTRNR2L2
MSH3
DHFR
POP5
SP2
GRSF1
IL23R
EXOC2
ARSG
KAZALD1
MTRNR2L1
MSX2
HOXA5
OTX1
RASSF2
PAX6
ZNF652
IFI16
SH3BP2
MRPL34
DDA1
ABHD8
LPIN1
HOXC5
INAFM2
IER3
FLOT1
NDUFS7
FGR
PYDC5
SH3BP1
PLEKHO2
MBD2
TMPPE
GLB1
SPCS1
GLT8D1
CBX4
FKBP1A
DHRS3
SPATC1L
RNF149
PDP2
UPF3A
LYL1
MVB12A
HIP1
PRDM6
HNRNPA2B1
CBX3
HUS1
HEXIM2
KDM6B
CMTM7
GTF3A
ETFBKMT
ARID5A
NELFA
NEO1
SEC14L1
TMEM212
EAPP
KCNAB2
JAK3
STK38
MYBPC3
FBXL18
MRS2
PARK7
HSPA1L
HSPA1A
TBC1D10C
PPP1CA
TIGD1
EIF4E2
CCPG1
C15orf65
RPS6KA1
NOXO1
SMC6
GEN1
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
NRROS
EMP3
NR1D1
KAT6B
HNRNPD
PNKD
KMT2E
ATG16L2
POR
UBXN10
PLA2G2C
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
TAF12
CCDC88A
SNX1
CIAO2A
RASA4
SPECC1
ARHGEF10L
NADK
ACTB
BRWD1
IER3IP1
ZSWIM6
CARNS1
DGKZ
KLF17
FGFRL1
RPLP1
BIN2
ENO1
WDR6
NBEAL2
CCDC12
NKD1
SKIV2L
NELFE
PSTPIP1
EFHD2
KITLG
FAM110A
MEOX1
RASA4B
NCOA2
TMEM104
NAT9
MTMR4
ATP23
CAND1
TBL2
STIL
OTUD7B
DIAPH1
ZNF76
CCDC114
NBPF1
USP15
CCDC102A
SLC39A7
RXRB
HSD17B8
PLEC
WNT10B
SNX3
ING1
CARS2
LRRN4
TRAF4
MTRNR2L8
MEF2D
ASB6
AHNAK
VAV1
SH2D3A
GSTT4
CABIN1
NRXN2
HOXC8
ZNF775
RASSF5
LPCAT3
LNPEP
BHLHE40
TMEM242
RARG
IMPG1
ZNF740
CSAD
CPSF4L
NEBL
LIG3
DDX3X
DENND2D
PPP1R18
NRM
CDC42EP3
IRX5
CCDC174
DIAPH3
IQCH
AAGAB
NFKBIA
CCKAR
HEBP2
CBFA2T3
ZCCHC3
C20orf96
CD79A
MNT
ZFYVE28