ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584304 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◣ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
LOC102724770
DGCR6
NEUROG2
TLE6
LARP7
RABL2A
NUP205
ZP4
POLR3F
DZANK1
PSMD1
NME6
NEUROG3
MAPKAPK5
DUX4
TBCK
AIMP1
MBTPS1
NVL
HSPA9
POLR2E
GPX4
NUP85
ARHGAP10
CACTIN
IPO13
ICMT
HES3
DYNC1LI2
ZNF503
NNAT
BLCAP
PES1
RWDD1
TAOK3
SUDS3
RPL21
FARSB
C19orf48
FAM187A
EFTUD2
CCDC103
VDAC2
GOSR2
PAK1IP1
C6orf52
MRPS7
MIF4GD
GGA3
VTI1B
S1PR4
NCLN
SART3
ISCU
ACTR10
DCTN1
PSMG2
CEP76
PNO1
PPP1R1B
SEC61B
SF3B3
COG4
HES1
EXOSC5
BCKDHA
SUPV3L1
UFM1
SKP1
TSN
RPL35A
IQCG
LMLN
ATP5MG
PCBP1
TSNAX
PSMD12
ANAPC7
UPF2
MRPL11
RPS27A
CLHC1
STAM2
SLC35B1
STAM
LYRM4
FARS2
DUSP29
NHS
COX7A2L
GLRA1
DPH6
REXO1
ZNF608
SRD5A1
NSUN2
CDX2
ZNF576
IRGQ
ZRANB2
HADHB
HADHA
TMED1
RPS12
RBBP5
TTC8
VEZT
FGD6
HSPA1B
SELENOF
HS2ST1
PI4KB
SMC2
FRG2C
CAPRIN1
MRPS5
FAM104A
C17orf80
XPNPEP3
ST13
DNAJB7
WNT1
ATOH1
PAF1
MED29
PIP4P1
OSGEP
APEX1
IGFBP2
NDUFA4
RBKS
BABAM2
URM1
SERINC5
VARS1
NBAS
LZTS1
SFI1
EIF4ENIF1
GADD45G
GOLGA5
INSM1
ADK
AP3M1
PMAIP1
CCDC33
MALRD1
PDAP1
BUD31
USP1
RPS23
ATP6AP1L
RABGGTB
ADNP2
PROSER1
NHLRC3
ZDHHC1
TM9SF1
IPO4
TSSK4
ICE1
NFKBIL1
DDX39B
ATP6V1G2
LEFTY2
G6PC2
NAV3
PTGES2
HOXA3
HOXA4
PHOX2B
IL17RD
KDM8
NEUROG1
SEC11C
BICRA
RPL7
RDH10
C6orf47
BAG6
APOM
CR1L
CERCAM
PIN4
ARF1
BNIP3
RPS29
LRR1
SUCLG1
CACNA1D
STK36
RNF25
SULF1
ST18
ARHGAP11A-SCG5
ARHGAP11A
TMEM212
ASXL3
TMEM120B
PAX6
RAB11FIP1
RFX2
ABLIM3
KRT20
MOBP
FAM222A
NR2F1
COMMD1
CCT4
CDX1
PPP1R1A
TAF9
RAD17
AK6
RHBDD3
EWSR1
DLL4
OAZ3
FZD8
ETS1
SLC10A2
CHODL
OR6B2
NDUFA10
NEUROD1
TPM1
RIMKLB
EPHA5
PANK4
HES5
CLDN2
PAH
ASCL1
PRUNE2
TCF7L2
TTYH1
LRATD2
CPSF4L
SOAT2
IGFBP6
CNTN1
UBE2I
DMBX1
NCOA7
FRG2
UNKL
C16orf91
ARID3C
DCTN3
SALL1
TPRA1
RPN1
CDC42EP2
GADD45GIP1
NUTM2D
ADAM18
GORAB
HOXB1
HOXB3
HOXB4
SCGB1A1
SMC6
GEN1
ZNF585B
ZNF383
PDE6B
MUSTN1
ITIH4
HOXD3
HOXD4
ERRFI1
RBBP7
PRRX1
TBC1D8
PSMB5
SPACA1
PDE12
DDAH1
CCN1
WDR59
SKIL
TESC
CDH18
ME3
RAI14
DLX4
GAD2
HNRNPA3
NOTCH2NLC
NOTCH2
SYBU
MRTO4
EMC1
FXYD2
DSCAML1
DIPK1B
HHIP
USP29
FKBP1A
FJX1
OR10AC1
TIGD1
EIF4E2
C8B
ECEL1
PDHB
HOXA1
HOXA2
ALKBH5
DUSP6
CNPY2
FGF19
GTF3A
HES7
ALOXE3
METTL24
PLAGL1
UNCX
KDM2B
PCBD2
NEK3
FOXA2
SALL4
ZNF746
KIF26A
AQP6
PDHX
APIP
EIF2S3
CADM3
HNRNPA2B1
CBX3
ZFX
DEFA5
PTGR1
RBPJ
CATSPERG
GATA6
OTX1
HSPA1L
HSPA1A
GPR20
LAMA4
EVA1A
FAM214B
STOML2
PIGO
CBFA2T2
LHPP
KRT16
ARL4D
COL17A1
ADGRL2
MUC20
SNAPC1
RPH3A
ZGPAT
ARFRP1
REV3L
ASB6
STRA6
FABP7
TMEM107
PDPN
CDON
TMSB15B
HOXB8
HOXB7
HOXB6
EIF2S1
ATP6V1D
ANK2
METTL11B
NOXO1
KLF17
B3GALT5
SYNGR3
GFER
ZADH2
TSHZ1
GTF3C4
DDX31
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
AXDND1
GFRA3
LRIG1
CYP51A1
TMEM14A
TLE4
BFSP1
PPP2R5A
MDFIC
MYO10
TTC13
ARV1
CLGN
CAMTA1
GNAI1
ZFHX4
TRIM65
MRPL38
MBNL3
THRA
RPS24
POLR3A
HNF1A
VOPP1
FOXP1
ALDH1A2
NRXN2
REC8
SNCG
MMRN2
CLMP
ZNF214
NLRP14
FOXB1
H2BU1
H2AW
GNB2
ACTL6B
KLHDC8A
HOXC6
ID1
HOXC5
CDH16
CXCL12
NFE2
KCNN4
CCDC200
CNTN4
DHX32
TMPPE
GLB1
KIAA0895
FRMD7
OPLAH
UBR2
PPFIBP2
ADM
RARB
LIG3
LRGUK
MSX1
LBX1
RIPOR2
P2RX6
MEIS3
MEIS2
GUCY1A1
SLC35E3
STK38
DDX3X
LIMCH1
LIN28B
SOX6
PCDH11Y
TPST2
C8orf34
NEK7
ABCB5
PAX3
TEX30
TLE3
HOXA5
AGO1
POU3F2
HOXA6
LOXL4
PALM2AKAP2
ITGB6
LRIG3
LRRC4
TLN1
CREB3
DTX4
ALOX5AP
CD99L2
CPLX1
CPN2
WDR74
STX5
CLDN11
DAAM1
TRABD2B
SOX21
TPH2
CSTF2T
TCF4
QPRT
FREM1
EIF4E3
ZNF367
PANK2
H2BC17
H2AC17
H3C12
CDCA7
RARA
TMA16
RGS12
SH2D3C
BNIP2
SCARF2
USP17L21
USP17L20
USP17L12
USP17L22
GDNF
ARHGAP24
BRWD1
HSPB8
C5orf63
PAX8
PJA2
PLEKHA5
DHRS4L1
GAS1
DAPL1
TDG
C12orf73
ADO
DLG4
ACADVL
PNKD
SMARCA2
SOCS3
TTLL6
NR4A2
PRDM12
PCBP4
CD82
GPR62
THEMIS
SLC44A3
SNX1
CIAO2A
TTI2
NEDD9
FAM107A
NELFA
MSI1
ID2
BBS9
PDE4DIP
S100A10
CDCA7L
CDC73
TLE2
ANKLE2
MAMDC2
ID3
SEC22B
CITED2
MYLK4
FOXP2
SP5
MAB21L2
ARID3B
GATA4
TMEM70
ELOC
GPR108
MYRIP
NFIA
SMPDL3A
TRIP10
HOXC4
MTRNR2L2
MSH3
DHFR
MRPL3
POP5
SP2
GRSF1
IL23R
EXOC2
ARSG
KAZALD1
MTRNR2L1
RUNX1T1
MSX2
DMRT3
RPL34
KMT2A
NOTCH2NLB
NOTCH2NLA
TBX3
CYP26A1
RASSF2
ZNF652
IFI16
SH3BP2
PARP11
MRPL34
DDA1
ABHD8
LPIN1
INAFM2
BRINP1
SH2B1
IER3
FLOT1
NDUFS7
FGR
PKDCC
PYDC5
SH3BP1
PLEKHO2
MBD2
METTL3
SPCS1
GLT8D1
CBX4
DHRS3
SPATC1L
DBX1
RNF149
PDP2
UPF3A
ERLIN2
CS
LYL1
MVB12A
HIP1
PRDM6
SPG7
HUS1
HEXIM2
KDM6B
CMTM7
ETFBKMT
LIN28A
ARID5A
MAGEA11
RPS10-NUDT3
RPS10
ABCG2
NEO1
TLE1
SEC14L1
ZFHX3
EAPP
KCNAB2
JAK3
MYBPC3
FBXL18
MRS2
PARK7
VIP
TBC1D10C
PPP1CA
PHC2
CCPG1
C15orf65
RPS6KA1
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
NRROS
EMP3
NR1D1
PDZRN3
KAT6B
HNRNPD
KMT2E
ATG16L2
KIF21B
POR
UBXN10
RASL12
PLA2G2C
KBTBD13
NCOR2
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
TAF12
CCDC88A
RASA4
SLC7A5
SPECC1
ARHGEF10L
NADK
ERCC1
ACTB
USP17L13
IER3IP1
ZSWIM6
IRF2BP2
CARNS1
LMO4
DGKZ
FGFRL1
RPLP1
HAND1
BIN2
ENO1
WDR6
NBEAL2
CCDC12
NKD1
SKIV2L
NELFE
PSTPIP1
EFHD2
KITLG
FAM110A
MEOX1
RASA4B
NCOA2
TMEM104
NAT9
SHOX2
RSRC1
MTMR4
ATP23
CAND1
TBL2
STIL
SMURF1
OTUD7B
CRYAA
CRYAA2
DIAPH1
ZNF76
CCDC114
NBPF1
USP15
CCDC102A
SLC39A7
RXRB
HSD17B8
PLEC
WNT10B
SNX3
USP17L11
ING1
CARS2
LRRN4
MEF2C
TRAF4
MTRNR2L8
MEF2D
USP17L18
AHNAK
VAV1
SH2D3A
GSTT4
CABIN1
MXI1
ACSS3
HOXC8
ZNF775
RASSF5
LPCAT3
LNPEP
BHLHE40
TMEM242
SLC2A9
RARG
IMPG1
ZNF740
CSAD
NEBL
DENND2D
PPP1R18
NRM
CDC42EP3
IRX5
CCDC174
DIAPH3
GGCT
IQCH
AAGAB
RPL17-C18orf32
RPL17
NFKBIA
CCKAR
HEBP2
CBFA2T3
ZCCHC3
C20orf96
LDLRAP1
CD79A
MNT
ZFYVE28
CFAP99
DMD
CD38
BCL3
BNC2
POLD2
ZNF414
HOXB5
CPVL
CHN2
SKI
INAVA
CNOT2
TRERF1
USP17L10
RAC2
ZNF718
ZNF595
CMTR1
PCNA
CDS2
TUBA1C
POLR2J3
TUBB
MDC1
SYNPO
IQGAP2
KHDRBS1
LFNG
SUPT4H1
SLC38A10
SCAMP4
ADAT3
RXRA
TYRO3
NDRG1
MYO1G
NTRK2
OPA3
LOC102724265
RNASEH2B
CREB5
GPAA1
EXOSC4
MYO1B
PPIB
MINDY2
PTK2B
DCSTAMP
H6PD
SLC9A1
SIRT4
FTL
DISP2
ADGRG5
GALNT10
KBTBD11
PKN2
COL11A2
NDFIP2
MAPKAPK3
CISH
PLCB2
SMAD3
CDK5R1
AGTRAP
RYBP
USP3
ADCY7
ERI3
TRIM48
SHB
SEPTIN4
NKIRAS1
RPL22
RNF207
TXNRD1
MUC12
PEX14
DFFA
BST2
GFI1
MYO1F
FAM120B
NAA10
ARHGAP4
KCNH2
YTHDF2
SMARCD2
PKM
NAA80
IFRD2
HYAL3
PCTP
TMEM275
PRDM1
HESX1
ELANE
CFD
ZNF397
PPCDC
BAX
MRPS24
RABGAP1L
CYP2E1
SLC35E2B
NOTUM
NDUFV1
TBRG4
ARHGEF1
HNRNPF
KIF5C
CCND3
NR1D2
ADORA2A
COL23A1
C1orf105
RNF166
CTU2
CYCS
TAF15
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
GSPT1
TMEM9
SP7
CRYBG1
EVX2
DGAT2
ZDHHC4
BAIAP2
CEP41
HMGCS1
ARIH2
SYTL1
SYTL3
MECOM
ABHD17A
CBWD5
CBWD3
SCNN1A
LTBR
TUBB3
MC1R
RNPEPL1
DUSP28
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
ARID2
THRAP3
SOD2
KCTD6
SEMA6D
CPT1A
PTP4A2
IL6R
PRSS56
CHRND
AKIRIN1
LAT2
SLC35E2A
DHX16
ABHD11
KANSL3
FER1L5
CYTH4
EVX1
MYEOV
PDE4D
CLDN9
PTGES3
FOS
NR2C1
MAGIX
MBD6
GAS7
DDIT3
TMEM222
FAM118A
FAF2
ZNF285
NECTIN1
C12orf50
C12orf29
RND3
SRPRA
SMUG1
RBL2
KCNIP4
ARMC12
STAT1
VGLL4
NXPH4