ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX327759 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◣ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

NAA80
IFRD2
HYAL3
TMEM115
NPRL2
CYB561D2
PHB
SMPD3
CALR3
C19orf44
TCEA2
CLPB
TMTC3
CEP290
PPRC1
ST3GAL2
UCKL1
PAFAH2
INVS
ERP44
BOD1
TESK2
MMACHC
GPBAR1
PNKD
AAMP
AHCYL2
ODF3L2
MADCAM1
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
SLC39A1
CREB3L4
CRTC2
LARS1
ORMDL3
GSDMB
GDE1
CCP110
STAU1
PANK4
HES5
AP2S1
ARHGAP35
TSNAXIP1
RANBP10
CHMP4B
GSPT1
UBE2T
PPP1R12B
KBTBD7
NUDCD1
CDCA3
PYCR3
GFUS
UNKL
C16orf91
PERCC1
SYMPK
FOXA3
PPP1R12C
ZNF189
MRPL50
NTAN1
HDGF
MRPL24
DDX23
SCRIB
ZFYVE28
CFAP99
ZNF225
TNFAIP1
IFT20
TTC13
ARV1
DEXI
CLEC16A
KBTBD6
UBQLN4
RAB25
LAMTOR2
ZNF513
SNX17
EIF2B4
TSSC4
FASTKD1
MED15
C1orf159
PEMT
CTU1
BTRC
NUDT13
ZNF749
SV2A
BOLA1
CNIH4
RPL36
MICOS13
HSD11B1L
UBAC1
SLC35B4
GATB
MAD2L1BP
GTPBP2
PHF12
TFEB
VCPIP1
C8orf44-SGK3
ING4
TSC2
NTHL1
MIDN
ATP5F1D
CBARP
UNK
H3-3B
FEM1A
SCAF1
RRAS
SIRT2
NFKBIB
WDR87
SIPA1L3
TIMM21
FBXO15
TMEM127
CIAO1
TMEM59
TCEANC2
RPIA
TMEM11
ZNF444
CCDC146
JOSD2
ASPDH
WNK1
ZNF56
NDUFS2
ADAMTS4
TTC33
OSCAR
NDUFA3
BANP
MRI1
C19orf53
ZNF169
ASIC3
SLC4A2
CDK5
AP2M1
DYNC1I2
RASSF1
ZMYND10
ZNF517
ZNF34
RPL8
COX7C
NOP14
GRK4
PHF13
ZFYVE19
DNAJC17
TRAK2
STRADB
SNX27
ZFYVE1
TBL3
RPS2
RNF151
NOXO1
TRAPPC3
MAP7D1
CHPF2
ABCF2-H2BE1
ABCF2
SMARCAL1
RIC8B
BUB3
HMX2
SMUG1
CTF1
BCL7C
LRRC29
PRCC
ZSCAN22
NFXL1
TMEM70
ELOC
DSTYK
PEX14
DFFA
STK25
TFPT
PRPF31
ING3
LETM1
HTRA2
DQX1
WDPCP
MDH1
CCDC174
THRAP3
VARS2
GTF2H4
FBXW11
VPS50
HEPACAM2
USP48
TMEM101
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
ZNF384
ZNF235
TTBK1
ZNF337
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
GPKOW
CAPN15
SOX6
C11orf58
ZNF350
CTDP1
EMILIN1
KHK
OST4
UFSP2
C4orf47
ZNF420
ATP5PO
CLP1
YPEL4
DESI2
CCDC150
AURKAIP1
RABAC1
ZNF37A
BUB1B
RPS7
LMNB2
CCDC90B
CNOT1
UBR2
PSMD11
MYLK4
WRNIP1
SDCCAG8
CEP170
ZNF768
ZNF747
SERPINI1
PDCD10
SSBP1
RPGRIP1L
FTO
NMT1
DCAKD
RAB1A
ZNF224
PEX26
NUP153
MON1A
RBM6
CHCHD3
INTS1
SUFU
ACTR1A
RPS20
TRAF7
RAB26
ZC3H11A
ZBED6
RPS6KB2
PTPRCAP
ZNF230
TIMM13
B3GALNT2
DDX49
COPE
ZNF133
SEC61A1
MED27
PDE6D
COPS7B
ARHGAP9
MARS1
TMEM43
CHCHD4
CDK5RAP2
AKIRIN2
PRR14
FBRS
ZNF554
TTC1
SLMAP
KMT2B
THYN1
ACAD8
INTS9
HMBOX1
PNPLA6
FBXO46
MEIOSIN
UCHL5
RO60
TOR1AIP2
TOR1AIP1
PTDSS2
ANO9
GPR108
TRIP10
IPPK
POLR2E
GPX4
PSMB4
ZNF484
NCDN
KIAA0319L
RALBP1
GPR15
CLDND1
KAT7
GPAA1
EXOSC4
PSMD4
CNOT4
ZNF514
ZNF2
CWC22
ZNF32
PRRG2
NOSIP
FBXL19
UBALD1
MGRN1
RTN2
ZNF419
ZNF772
S1PR4
NCLN
UBL7
SAMD1
MISP3
C19orf67
ZGPAT
ARFRP1
RALGAPA2
SCAMP4
ADAT3
PANK3
FAM193A
MXI1
TXNDC9
EIF5B
FBXO48
APLF
ZNF354A
SNX1
CIAO2A
FHIT
ZCCHC4
ZNF547
TRAPPC2B
VIPAS39
AHSA1
SPHK2
RPL18
FAM83E
STK17A
LEMD2
PA2G4
ZMYND15
MED11
CXCL16
BICD2
SEC11C
WAPL
RAB13
RPS27
RANGAP1
GABARAP
PHF23
DVL2
ZNF227
TMEM160
ZNF527
PKLR
FDPS
ZCCHC8
ENOX2
RAB5C
PHB2
LUC7L
FAM234A
MAF1
CYC1
WDR97
ZNF17
RPS3
VPS4B
UTP11
FHL3
YPEL3
TBX6
EXOC4
FAM185A
TMEM69
GPBP1L1
EMP3
CCDC114
VAPA
RAB29
ZW10
CLDN25
CRK
PRR5L
COMMD9
MAX
SLC25A19
CLDN6
TNFRSF12A
THOC6
HCFC1R1
MRPL20
CCNL2
NARS1
ZNF226
ZNF805
AURKC
WBP1
INO80B
RPL18A
PTBP1
GUSB
LTA4H
CDK8
SCYL3
RGL2
PFDN6
WDR46
LIN37
PROSER3
HSPB6
PSENEN
IGFLR1
ZNF862
PSMD2
CDCA8
C1orf109
SCRT1
DGAT1
FAM53C
CDC25C
RACGAP1
PCM1
ASXL1
AQR
PIH1D1
ALDH16A1
SLC17A7
DDX47
RAB30
PGBD4
EMC7
MCRIP2
METTL26
WFIKKN1
GINS3
DBP
CA11
ZNF343
NEK8
RPL23A
TLCD1
RAB34
PROCA1
NFKBIL1
DDX39B
ATP6V1G2
METTL3
ZNF773
CIAO3
IGSF8
GPR137
NDUFB5
MRPL47
SNRPE
MBD1
CXXC1
WBP2
SSR2
OPA1
BIRC5
PIGU
PSMC4
GID4
ATPAF2
MUS81
CFL1
KATNB1
CAND1
TMEM186
PMM2
CNOT6
USP31
TMEM94
COPS8
MITF
ZMAT5
UQCR10
DPH2
B4GALT2
ATP6V0B
TRUB1
ZNF277
DOCK4
SSR3
MORF4L1
VMO1
PSMB6
GLTPD2
ABRAXAS2
EEF1AKMT2
SEPTIN9
PRR22
DUS3L
RPS26
WIZ
RBL1
AHCTF1
BDP1
EIF2S2
L3MBTL2
CCAR2
C8orf58
WDR53
FBXO45
PES1
TLE3
FAM228B
TP53I3
SF3B6
PPP1R13L
POLR1G
GSC2
USP35
KCTD21
RPL34
TOR2A
CLPP
SLC50A1
DPM3
SH2D3C
CDK9
TERF2
RNASEH2C
KAT5
ZNF451
RPS13
TPGS1
THAP1
VRK1
HSPA13
ZNF586
ZSCAN5A
ZNF436
TMEM245
DOHH
FZR1
ZNF584
NAT14
ZNF628
RAB7A
MRPL11
CAPN10
ZNF500
EIF1B
OAZ3
TRABD
SUCLG1
TMED9
B4GALT7
GEMIN6
FBXL18
CWC25
MED23
ABCC5
RWDD1
RETSAT
ELMOD3
DPP9
HSP90B1
NOP53
TMEM143
SYNGR4
RAD51AP2
ZNF776
FCSK
NUP205
STMN3
RTEL1
RPL12
LRSAM1
SYPL1
NOLC1
NUF2
ZNF585A
ZNF25
DCP1A
PRKCI
TRMT1L
SWT1
ALKBH8
SESN1
CEP57L1
ZBTB7A
SHLD1
ZNF764
RPP40
SNAPIN
QTRT2
CCDC191
BABAM1
PRKCSH
CCDC151
RXFP4
KHDC4
CFAP410
CSRNP2
TMEM199
SEBOX
POLDIP2
POLRMT
FGF22
TOMM22
GFM1
UBE2Q1
CHRNB2
PPP6C
BOD1L1
SUGP1
MAU2
KPTN
CARS1
TOR1A
CCDC124
ZNF599
TRMT2A
RANBP1
PNKP
AKT1S1
TBC1D17
EML6
GGPS1
ARID4B
SCAMP3
FAM189B
ZNF548
CAPG
SH2D6
TMEM33
THRA
ACLY
LSG1
RBBP5
CNPY2
IPO8
ZNF317
RBL2
FAM222A
KCTD5
ZNF567
C12orf43
RPL37
CARD6
ELP6
RAB3C
ZNF221
UBE2V1
DCAF1
MRPL54
APBA3
RAX2
SF3A3
XPOT
DNAJC28
ZNF140
KBTBD8
TSN
SEL1L
ZSWIM9
LIG1
ZNF416
ZIK1
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
HIRIP3
SLC33A1
ZNF789
ATP5MF-PTCD1
ATP5MF
SKIV2L
NELFE
UBA52
INTS4
TMEM230
PCNA
ADSS2
CATSPERE
WASF1
CDC40
TUT1
MTA2
COG2
SMIM13
NME1
BET1
ZNF446
ZNF324
ZBTB45
SLC27A5
BOLA2-SMG1P6
ILF3
SMN2
SMN1
STRN
ZBTB7B
CMPK1
TMEM262
SERP1
EIF2A
FBXO38
TMEM109
PRPF19
GALM
HPS6
ARMH3
VEZT
FGD6
FAM168A
ZNF180
FAM149B1
ECD
IPO7
SLC38A9
THAP11
NUTF2
CENPT
YIPF2
TIMM29
GSK3A
CHCHD6
SUPT4H1
MACC1
GALK2
COPS2
MEN1
MAP4K2
CCDC117
PPP2R5B
ATG2A
ZDHHC16
EXOSC1
EIF3C
EIF3CL
NCBP2AS2
NCBP2
ZNF550
TSACC
CCT3
REXO1
OSBPL11
NKIRAS1
RPL15
SETMAR
ZNF268
NDUFS7
SETDB1
DNAJC11
SASS6
THAP4
ATG4B
LRFN3
ZNF45
NUMA1
LRTOMT
C1orf54
APH1A
SNRPB2
WDR45
PRAF2
SAMD10
PRPF6
YJU2
BRIX1
CCDC77
SDF4
B3GALT6
PRPF4
CDC26
CACTIN
C15orf40
EIF3F
DAZAP1
GAMT
CLINT1
ZNF101
ATP13A1
TXNL4B
DHX38
SKP2
LMBRD2
RPS3A
UBA1
RAB8B
OLFML2A
NR6A1
COPS7A
JRK
DARS2
CENPL
LRRC47
DNM1L
EIF3D
TIMM22
GPT2
IFRD1
MVB12A
ZNF304
TM9SF4
NAA38
TMEM88
CYB5D1
WDTC1
MTR
ESCO2
CCDC25
DEDD
SHPK
CTNS
NMNAT1
LZIC
SH2B1
TUFM
SF3B2
GAL3ST3
POLR2J3
DHX8
SART1
PNISR
KNSTRN
AKAP8
VKORC1
PRSS53
ZC3H10
RPL41
ESYT1
ADO
WDR18
YY1AP1
DAP3
MRPS25
NOP16
HIGD2A
PEX12
AP2B1
TOGARAM1
KLHL28
POMZP3
MTERF4
ZNF614
RBM41
PSMD10
ATG4A
ZNF211
MRPS15
ZNF721
PIGG
ERF
STX10
IER2
DHX33
GFM2
SLC39A13
RPS19
PRPSAP1
PSMD3
MAMSTR
SUPT5H
RPS16
ZNF417
GPS2
EIF5A
UBE4A
TSNARE1
MRPS16
DNAJC9
TMEM147
TSPAN4
POLR2L
CD151
IPO13
LRPAP1
TSNAX
PCNX3
MAP3K11
RNASEH2A
PRDX2
NR1H3
ACP2
UFD1
CDC45
PIP5KL1
DPM2
PGAM1
ARHGEF1
CD79A
HEXIM2
CEP350
N4BP2L2
ZNF155
PUS3
DDX25
ZSCAN32
ZNF174
SAP30
CCNL1
PSMA2
ZNF324B
FBF1
PPP1R11
POLR1H
RNF39
METTL18
C1orf112
ALG10B
ALG10
UBXN6
HSPH1
PPIP5K2
UCK1
WASHC3
TRUB2
COQ4
TTLL11
MIA3
ZNF79
SNIP1
DNALI1
UBE2J2
SCNN1D
STX16
TINF2
GMPR2
NEDD8-MDP1
NEDD8
PSMC5
FTSJ3
NAPB
COA3
CNTD1
SERBP1
PARK7
SSNA1
ANAPC2
RPP30
ITPR1
HSCB
CHEK2
CACYBP
NUP214
ANGEL2
CDC34
PURB
MRPL19
UBE2N
CUEDC2
ZNF165
OR1F12
ZNF181
SLC37A3
RAB19
SPC25
SLC25A44
PSMC3
CTNNBL1