ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
RNASE6
EDDM3B
MRPS28
ING1
CARS2
PXYLP1
NDUFS7
CBX5
HNRNPA1
OTUD7B
RBKS
BABAM2
CNOT2
POLD2
ZBTB7C
FRMD7
RARG
GATD3B
GATD3A
ZNF775
SMARCD2
KANSL3
FER1L5
NFE2
MAMDC2
ZCCHC24
ZNF827
GPRC5A
ATXN1L
REEP6
PCSK4
WDR7
CLK1
TAF1A
PKN2
MRGBP
HORMAD1
DONSON
METTL3
TUBB
MDC1
FTL
BAX
MTRNR2L2
MSH3
DHFR
RAE1
MTRNR2L3
IER3
FLOT1
RPGRIP1
SYTL3
DYNLT1
ZFP36L1
ZGPAT
ARFRP1
CAPN1
KDM3A
WDR74
STX5
CCDC174
NANP
MBD2
VEGFB
LOC114841035
FKBP2
PPP1R14B
KIF5C
STX18
RASA4
MTRNR2L8
ASNSD1
ASDURF
MAMLD1
PDE6B
RASA4B
EIF5
MAML3
GPR108
TRIP10
KDM6B
CTF1
BCL7C
NR2C1
NUDT15
PHB2
UQCR11
USP42
BACE2
MTRNR2L1
SKIDA1
MLLT10
SLC10A5
IMPA1
ZNF395
RARA
C19orf12
LIPA
UROS
BCCIP
KLK9
KLK11
KLK10
PTGES3
ARHGAP12
HECTD4
TRIP12
FBXO36
USP1
CTBP2
FAAP24
CEP89
TRMT1L
SWT1
MPZL1
NEK1
CLCN3
TMEM241
STAT2
APOF
BCL9L
ARHGEF35
PMPCB
ARHGEF5
MIGA1
DNAJC16
CASP9
DUS1L
RNASE4
ANG
CTSW
DUX4
RIPPLY2
CYB5R4
SMIM3
SNRPA
C19orf54
AZGP1
KRT19
KRT15
ANTXRL
DPH2
B4GALT2
ATP6V0B
PLEKHA8
FKBP14
MRPS31
ANKS1B
CFAP69
SLC29A2
PPP2R5A
PPP1R13B
FOXP1
INTS5
GANAB
NOTCH2NLC
NOTCH2
COL23A1
NCOA7
TRABD
TEX264
MED9
USP37
CNOT9
RPL37
CARD6
PDCL
NAGLU
CBR4
SMIM20
UQCRC2
FXYD3
RPL22
RNF207
CPNE6
SREBF1
ABHD11
FAM78B
S1PR4
NCLN
FRG2C
BAZ1B
ALDOA
SEPTIN2
HDLBP
TSPAN10
NPLOC4
KMT5A
SLC25A16
FKBPL
ATF6B
DRG1
SZT2
MED8
SERTAD2
LOC105378979
GMNN
PSMB4
SOAT2
IGFBP6
SYTL1
CDC42SE2
METTL25
CCDC59
COLEC11
RASAL1
RNF121
LOC100133315
CSH2
TRIM48
ZSWIM8
FUT11
CHCHD1
TECPR1
CDC20
MELTF
RPLP0
GCN1
SENP8
MYO9A
ST8SIA6
NPNT
MINDY3
SH3YL1
ACP1
RNF220
RGPD2
RGPD1
ZSWIM1
SPATA25
NEURL2
CTSA
AARS2
MRPL54
APBA3
RAX2
CAPNS1
ABCC10
TP53INP2
C6orf47
BAG6
APOM
SH2B1
ADAM17
ABHD3
NFIC
PARP9
DTX3L
TM4SF1
TXNL4A
PLA2G6
MTRNR2L9
AFF1
HBP1
COL27A1
SLC11A2
EN1
SMIM22
ROGDI
TDG
C12orf73
FAM20B
RPS3A
VPS26C
TNPO3
TDRD3
CCL28
SOD2
MYADM
WTAP
GDPGP1
CIB1
RPL5
KLHDC2
FDXACB1
C11orf1
ALG9
EAPP
TRIB1
SIPA1
MRPS16
DNAJC9
DNAJC27
ATXN2
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
MKRN3
PCCA
RIMS1
GPAA1
EXOSC4
TTK
SERPINI1
PDCD10
PCTP
KRI1
CDKN2D
ARRDC2
RPS19
SEMA4G
DBP
CA11
SAMD12
SPIN1
KBTBD3
AASDHPPT
EPM2A
ENTPD5
BBOF1
ZBED9
ZNF133
FGF13
VARS1
NAA40
DCPS
TLR5
BRD2
NOTCH1
CDH11
TF
FABP5
MBD6
DDIT3
CGGBP1
NARS1
ZNF77
C3orf38
ADH1C
TSPAN6
SRPX2
PACSIN2
ZC2HC1C
ACYP1
CDC42EP1
CCDC200
RBM19
MUC3A
PSMB3
PCGF2
DCLK1
SULF2
SLC30A4
CEP70
SRCAP
LOC730183
TRIM11
TRIM17
CLDN11
TRIM54
SLC30A3
DNAJC5G
MINDY2
PTEN
KLLN
UBE2V2
TAF6L
POLR2G
SLC39A9
ERH
ARIH2
DHRS3
MDM2
SEC24C
DZIP3
CIP2A
ARID4A
ZNF746
DUSP4
ZASP
SAP25
CLK2
HDAC9
TEX12
BCO2
LCN2
ZNF384
KAT6B
AP1B1
TRIM38
ASB1
ETFRF1
CFAP94
TMED10
TMED5
CCDC18
NEPRO
SKIV2L
NELFE
ESRP1
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
AP2M1
ACSS3
CD46
PRUNE1
MINDY1
STAM2
H2BC17
H2AC17
SNX12
OR2B2
SMPD2
PPIL6
KLHL24
TBC1D22A
KCNQ4
FDX1
KLF5
OTUD5
MIEN1
GRB7
ANXA7
PSPN
ALKBH7
TCP11
DPP9
URGCP
IFT22
URGCP-MRPS24
POMP
DNAH14
MACROH2A1
ZNF85
NOTCH2NLB
NOTCH2NLA
ERCC1
ZNF318
SCAP
CACNB2
DLG2
LEKR1
GBA
IGSF10
LSM8
HGH1
ECH1
SPATS1
ODF3L2
MADCAM1
LETMD1
TXNDC11
CLECL1
SPAG16
GPATCH8
SLC25A35
RANGRF
IVNS1ABP
LARP1
CNP
ADA
SEC23A
OSGIN2
HNRNPA1L2
ARHGEF25
DTX3
SP2
LRRC1
RPS8
MRPS33
CCDC102A
ADGRG5
DYNLL1
SRSF9
CFAP73
MAMSTR
PIM3
ZBTB20
TRIM26
INPP5K
AKTIP
ANO1
GRK6
SNRNP35
MICALL1
DKC1
SYS1
ANAPC15
LAMTOR1
SLX1B
SLX1A
BOLA2B
BOLA2
SMAGP
SULT1A4
SULT1A3
BOLA2-SMG1P6
RPL34
ADM
SLC25A53
FAM199X
SLC22A4
KBTBD2
KCTD9
CDCA2
HAUS5
MRPS36
TTC28
POLDIP3
PRR3
GNL1
RAB3GAP2
ATP6V0E2
B4GALT6
TBC1D8B
ZBED6CL
LRRC61
ACTR3C
EPN1
RNF44
CDHR2
RNGTT
CEP78
PTBP3
PHGDH
ESR2
CS
MCOLN1
ZNF358
KLHDC8B
CCDC71
CYP4F11
NFKBIA
LEO1
TP53INP1
PIK3CG
TAOK3
SUDS3
ACBD3
TJP3
OPTN
CCDC3
ZMIZ2
CXCR4
WWTR1
CNDP2
HEXIM1
ZXDC
ZNF492
CAND1
ZNF446
ZNF324
CLIP1
HIC1
ELOVL4
LUC7L2
IQANK1
FAM83H
FAM3C
EXD2
PRKD2
TRIM2
FSTL3
C11orf91
MAP4K5
ATL1
CSTA
C12orf65
OLFML2A
NR6A1
KCNS3
OR8B12
OPTC
XRCC6
DESI1
UFD1
CDC45
RFLNA
MFSD11
SRSF2
GP9
TMEM262
TRAM1
PSMA3
QSER1
C16orf70
DNAJA2
KRT14
TRIM7
PAXBP1
FAM114A1
SEC61B
TMEM167B
LOXL4
KMT5C
PITX3
PCARE
GBF1
MYL12B
MYL12A
ENOX2
IRF9
CPNE7
AXDND1
STK11
TMPRSS12
FAM178B
COX5A
MT2A
GTF2H5
PCBP2
CLDN15
NEK2
RAB18
NUDT17
IRAK1
PLBD2
SBNO1
CSTB
CCDC120
SCYL3
MED12L
PCDH1
PEX2
PRKACA
MGAT1
BAG2
ANO6
FZD4
LOC102724770
DGCR6
BBS9
ST3GAL4
CLK4
LMF1
SOX8
DDX1
RBM7
C11orf71
TRAPPC6B
PNN
MPZL2
TCF7L2
TMEM79
SMG5
RNF10
COQ5
PELI2
DCAKD
AASDH
SLC3A2
CLUAP1
C16orf90
IRX3
TENT2
SLC38A1
THAP7
ZFP41
ZBTB44
ZNF563
OSBPL1A
EVL
ZNF22
DHX35
EPHA7
KCNN4
CALM2
SRSF3
ACADM
C2orf73
B4GALNT3
MRPL34
DDA1
ABHD8
RPS9
POMZP3
GOPC
CSF3R
TSEN34
SINHCAF
POLR2B
NOA1
HMGN3
SIRT4
PLEKHG3
OSR1
BCKDK
LRRC59
MFSD8
ABHD18
CRNKL1
CFAP61
FMC1-LUC7L2
FMC1
P4HA1
PSMD14
DYRK2
RNF135
OR6B2
NDUFA10
CLDN7
CASD1
COMP
RAB11FIP2
LOC391322
SLC9C1
DSG2
ADRM1
AGPAT3
SLC4A2
CDK5
ASIC3
SLC5A10
TOE1
MUTYH
SIKE1
DNAH12
RNASE1
RINL
CDC14A
DNAJB1
ZDHHC3
EXOSC7
TPD52L2
ABHD16B
PRPSAP1
TECR
SLC30A7
EXTL2
LAMTOR5
PPEF2
MOG
FEM1A
KRIT1
ANKIB1
CD320
CLDN4
PYROXD2
ZNF76
EEF1A1
OSER1
MRM1
DHRS11
S1PR2
UPK3BL2
CLDN19
SPDYE2B
SPDYE2
ARHGEF33
PRCP
DDIAS
CCDC9
NLRX1
PPP1R10
MRPS18B
ATAT1
MYOZ3
FRMD3
TAF2
SYCP2L
GCM2
CALD1
VAV1
SH2D3A
ZNF891
ZNF10
CALML5
FRG2
RNF168
POLG2
DDX5
CEP95
SNRPF
ZNF69
USF2
CYB5A
HEXIM2
SCNN1A
LTBR
MAPT
RND3
DTNB
CCDC183
RABL6
RPL23
WARS2
IL25
EFS
HUS1
UFSP1
ACHE
SHPRH
NADSYN1
DHCR7
WDR81
TLCD2
ENOSF1
LRRCC1
GPRIN2
GFM1
ZNF572
SYPL1
SQSTM1
DYM
COP1
RORC
C2CD4D
PRELID3B
LZTS2
NXPH3
SPTBN4
BLVRB
GNG7
ZNF484
CCDC130
AMER1
ATP1B1
ZBTB45
SLC27A5
NUP85
PTBP1
ZBTB7B
LENEP
HYAL2
CORO1A
HYAL1
POLRMT
FGF22
OBP2B
HNRNPLL
TXNRD1
TEAD3
SEMA3E
ELP6
CTNNA1
DSC2
PNKD
SNX3
KLHL7
SRSF5
ADCK1
DCAF10
H1-0
GCAT
CCDC38
AMDHD1
NINJ1
RASD2
EBAG9
COMMD3-BMI1
COMMD3
BMI1
PRKCD
SLC25A6
LTBP3
MTMR11
NEDD4L
LGALS2
TAF12
TKFC
DDB1
PPIL2
GSPT1
WDR43
HMG20B
STK32C
BARX1
MDH1B
FASTKD2
NIBAN2
FOXJ1
TMEM209
SSMEM1
PAK4
AQP5
AQP2
SRSF7
NOD1
CRY2
DENND6A
GXYLT1
CDK13
SIK3
ANKRD50
THUMPD3
CYB5R2
GSTT2B
DDTL
DDT
MARVELD3
HIBADH
RUFY1
MDP1
CHMP4A
POLR3B
GIT1
ANKRD13B
SPEG
HES4
ZNF506
KHNYN
CBLN3
GOLT1A
PNISR
REL
UQCRH
LRRC41
HINT3
PGAM1
ZNF675
RFLNB
GSE1
MTFP1
CTR9
ACTG1
ITGB3BP
EFCAB7
CCDC88B
SIT1
NDUFS6
MRPL36
FOXJ3
GABPA
ATP5PF
PLPP2
DMAP1
C1GALT1
LOC100421372
HSPA14
CDNF
MAIP1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
IPO13
RWDD1
DYNC1LI2
PSMG2
CEP76
VDAC2
HSPA9
FAM187A
EFTUD2
CCDC103
VTI1B
NVL
NUP205
POLR2E
GPX4
RPL21
TBCK
AIMP1
GOSR2
MRPS7
MIF4GD
GGA3
DCTN1
C19orf48
ATP5MG
EXOSC5
BCKDHA
REXO1
ZNF503
STAM
SRD5A1
NSUN2
HADHB
HADHA
SKP1
TSNAX
FARSB
NNAT
BLCAP
TSN
LYRM4
FARS2
PES1
UPF2
ZNF576
IRGQ
SLC35B1
ACTR10
NDUFA4
PAK1IP1
C6orf52
PNO1
CAPRIN1
DPH6
TLE6
TTC8
PSMD12
GOLGA5
COX7A2L
SUPV3L1
RBBP5
SART3
ISCU