ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637467 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◣ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

CDCA3
PEBP4
BTRC
NAA80
IFRD2
HYAL3
TCEA2
ALDOC
TESK2
MMACHC
CLPB
TSNAXIP1
RANBP10
TMEM115
NPRL2
CYB561D2
AP2S1
ARHGAP35
SMPD3
VARS2
GTF2H4
FEM1A
UCKL1
MAMDC2
CCM2
PRCC
WDPCP
MDH1
RHEX
CHMP4B
CALR3
C19orf44
NUDCD1
HDGF
MRPL24
GSPT1
ZFYVE1
IL33
ARL4D
ST3GAL2
PKIG
CDPF1
UTP3
PEMT
GPBAR1
PNKD
AAMP
APBA2
RPL36
MICOS13
HSD11B1L
WDR74
STX5
PLCL2
PHB
CCBE1
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
ZNF704
PCDH10
BANP
C1orf159
SLC39A1
CREB3L4
CRTC2
KBTBD6
AHCYL2
TMEM11
ASIC3
SLC4A2
CDK5
ATG4D
PPRC1
SLC2A8
ALDH1A2
ZNF444
STATH
RBL1
ATP2C1
TOX2
PI16
CD82
ARHGAP39
PAFAH2
HPSE
FRG2C
RTL3
PPIAL4H
PPIAL4G
RUBCNL
KBTBD7
FBXL12
CYTH1
BOD1
MAD2L1BP
GTPBP2
PHF12
LOC102724770
DGCR6
PPP1R16B
EMILIN1
KHK
OST4
TNIP3
VCPIP1
C8orf44-SGK3
SEC31B
AGBL1
INTS9
HMBOX1
NPIPA1
TMTC3
CEP290
ING3
HHIP
CST5
STAU2
DCLK3
IQGAP2
IL17A
EAPP
CALR
FARSA
RAD23A
GRAP2
KMT2B
NKAIN4
DSTYK
SHQ1
PANK4
HES5
LRP2BP
STK17B
SLC35B4
NPIPB15
BNIP3L
NFE2
RASSF1
ZMYND10
PARL
INVS
ERP44
CR2
CTSH
PPP1R12C
ARHGAP25
KCNC2
LAIR1
BIRC5
SCAF1
RRAS
UBE2T
PPP1R12B
SRPK2
UNK
H3-3B
TPST2
KCTD9
CDCA2
FBXL19
EMP3
CCDC114
ACADM
CD300A
NUPR2
CHCHD2
WNK1
NFRKB
BAIAP2
DEGS1
VAT1
RND2
PPIAL4F
PPIAL4E
PPIAL4D
GATB
TRIB1
ARHGEF7
TMEM236
TSSC4
SSBP1
KANSL1
ORAI2
GNA15
RPS9
ZNF718
ZNF595
UBR2
POLDIP3
DUX4
LARS1
NTAN1
VSX1
FBXW11
C3orf86
PYCR3
GFUS
KRTAP29-1
KRTAP17-1
KRTAP16-1
RNF144A
HEXA
CRYGN
KRT10
OR4D1
CCDC146
HHEX
ZNF225
MND1
FBXO48
APLF
TIMM21
FBXO15
ZNF331
VPS50
HEPACAM2
TAF12
CAPN15
SEPTIN9
CHD1
PARP16
FASTKD1
CTU1
PSMF1
GRAMD4
WFS1
SLC2A6
COPS4
ZFYVE19
DNAJC17
NCR3
LTB
LST1
UBQLN4
RAB25
LAMTOR2
SUFU
ACTR1A
ZNF335
NBEAL2
CCDC12
H2AZ2
FAM222A
CD69
GDE1
CCP110
VIPAS39
AHSA1
DGKA
PYM1
TGM6
F13A1
RANGAP1
ADA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
ATP11B
SLC12A6
DDX4
NOP53
RPS7
SYTL2
TESPA1
GSK3A
PTPN6
C12orf57
SEC14L2
SCGB1C2
SCGB1C1
ODF3
CCAR2
C8orf58
TNFRSF13B
BUB1B
TNFAIP1
IFT20
CXCR4
NSFL1C
TFEB
PHF13
SPTAN1
RUFY3
CXCR5
OSER1
RAB37
SLC9A3R1
STAU1
MED23
CCL1
CCL13
TTC28
EGFLAM
ITGA6
GFRA4
JOSD2
ASPDH
FXYD2
PTAFR
LZTFL1
LSM4
ATP6V0A1
RIC8B
GZMA
PEX14
DFFA
MDM4
GPKOW
GSR
TJP1
RCSD1
MAP1LC3B2
CHPF2
ABCF2-H2BE1
ABCF2
SYMPK
FOXA3
ZNF337
GPD1L
ZSCAN22
NMT1
DCAKD
SOX6
C11orf58
SOX17
MSL2
EPHX2
ZNF354A
NAPA
TFAP2C
TLR9
MX2
TMEM70
ELOC
ABHD12B
AP2M1
CD1A
WDR24
STUB1
JMJD8
WT1
ASB2
STK25
AHSP
PCNX4
YBX3
COX7C
DDX23
CAMK4
FAM193A
LAT
SPNS1
EPHA2
RPGRIP1L
FTO
PYGM
DEXI
CLEC16A
TFPT
PRPF31
UBE2J1
PTCH2
DYNC1I2
STX6
ZNF133
RPL29
SIRT4
PLXNA4
TFAP2E
HSPA13
TAS2R50
SYNJ2
LAMC2
DCP1A
ESYT2
SLC47A1
CHCHD3
TMEM59
TCEANC2
DLC1
LDLRAD4
TTI2
APBB1
SYT12
RIPK4
FMNL1
RABAC1
RFX8
GNGT2
ABI3
DEFB136
MRPL1
SSTR3
NUF2
CCDC90B
MAP3K8
ZNF821
NEIL3
DPP6
ZBTB45
SLC27A5
THEMIS
PLAAT5
CDK8
PRRG2
NOSIP
LIMS1
CNOT6L
RHCG
SUSD3
H6PD
N4BP2L2
PRKD2
CDT1
SLC33A1
PSMD11
ARHGAP9
MARS1
LMO2
NDUFS7
NOS1AP
SPATA46
C1orf226
ARHGAP24
TPGS1
COL20A1
NRROS
DRC7
CEP85L
PSMA6
EPHA1
NUDT13
ZSCAN25
TES
PRR22
DUS3L
ITGA4
NET1
ZNF513
SNX17
EIF2B4
TMEM127
CIAO1
FHAD1
EPAS1
SNX9
LYST
FGR
MTF2
TMEM239
C20orf141
HEMGN
KCNN2
DESI2
PEX3
ADAT2
ABRACL
DBNDD1
ANGPT2
FAM185A
FOXP1
TNFRSF1A
BCAR3
MMP9
ATXN7
TOMM34
STK4
HECTD1
NDUFS3
KBTBD4
FAM180B
ORMDL3
GSDMB
SLC4A8
GALNT6
PNLIPRP3
PTDSS2
ANO9
TNPO3
TOR4A
SLA
THYN1
ACAD8
SNAPC3
AURKAIP1
TTC13
ARV1
RPIA
TMEM107
PNOC
ZNF500
FAM3B
MRI1
C19orf53
MRPS31
AVP
RETNLB
FNTB
CCNG2
TMEM245
DNTT
MCFD2
TTC7A
GCSAM
ZNF784
SMARCAL1
TM9SF1
IPO4
REPIN1
ACTA2
ERAP1
TENT5C
TOR1AIP2
TOR1AIP1
ALDH3B2
SMAD2
DRAP1
C11orf68
FBXO46
MEIOSIN
BUB3
HMX2
CCDC69
MYO18B
GP5
ZNF165
OR1F12
CCDC138
SHISA5
SELENOW
IKZF3
TTBK1
FH
SMAD7
KIF2C
AAR2
USP7
PLK1
EDEM1
ARHGEF12
FIGNL2
PEX26
ASXL1
ATAD2
ABTB2
ZSCAN5A
ZNF736
PTPN3
DHX33
LGMN
SNRPD3
GUCD1
NME1
CSTA
RCAN1
TSC2
NTHL1
RAB1A
FAM228B
TP53I3
SF3B6
TRAFD1
MEIG1
CDK5RAP3
TSC1
GFI1B
CBFA2T3
RGL4
RLN1
NSMF
CDKN2C
MRPL44
TLR6
SERHL2
PHF19
PTCRA
CLDN5
SIRT2
NFKBIB
LIMS4
CXorf49B
CXorf49
ZW10
CLDN25
ERF
ZMAT5
UQCR10
CHST12
DHRS11
BICD2
SCML4
TNFRSF18
TNFRSF4
PALLD
PVRIG
ADD3
CCDC150
FCGR2A
CD1B
MON1A
RBM6
FCGBP
GABARAP
PHF23
DVL2
AFF3
FRG2
CDK5RAP1
ATXN1L
YPEL3
TBX6
ATF6
BORCS7
RHOH
TLE3
INTS12
GSTCD
STAP1
SPC25
LAMC1
TTC33
MTIF3
FOXN1
IDNK
MED15
C20orf203
PANK3
GATA2
CDK5RAP2
GFM2
STARD10
REXO4
ADAMTS13
RASAL3
RHOQ
ATP6V1E2
AOAH
RALGAPA2
PPP1CA
TBC1D10C
RB1
CARNS1
UNKL
C16orf91
PERCC1
ZNF354C
THBS4
CFAP20
FILIP1L
WDR87
SIPA1L3
IFIT3
CNIH3
UBAC1
USP48
SF3A3
FAM168A
LEF1
ADAMTS1
ZNF343
RNF168
SMCO1
RAB5C
XCL2
TMEM222
LCK
EVPL
B9D1
MAPK7
MFAP4
SCRIB
ZNF56
S1PR4
NCLN
TLE4
NOP14
GRK4
DTX2
LIG4
ABHD13
PEAK1
HMG20A
MBNL1
KCNA2
AFF1
RBM38
CYB561
EZR
PEX5L
CAMK1
ZCCHC8
MXRA7
PTP4A2
PRPF40B
HRH2
TRAPPC3
MAP7D1
CCNI
LETM1
ZGPAT
ARFRP1
ARHGAP32
MEN1
MAP4K2
RTN4
HIPK1
THRAP3
PRKCI
PTK2
STMN3
RTEL1
LRIG1
KLHL20
EPSTI1
IFNB1
NEK8
TRAF4
TMEM160
GGA2
ZNF749
ICAM2
HDAC7
APOBEC1
DPY19L4
RASSF5
RBBP5
TAF1C
ADAD2
ZNF354B
ARHGEF3
CISD3
NOL11
MYO1G
FLT1
ZFYVE28
CFAP99
TMC8
TMC6
AQP3
POLD1
NR1H2
USP3
GTF3C2
PDE6D
COPS7B
PIGU
TMEM143
SYNGR4
DPEP1
EHF
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
PNPLA6
CWC22
TRIP4
PCLAF
ZNF207
C17orf75
ETV3
FAM53B
FAM207A
ZSWIM9
LIG1
ZNF140
ZNF101
ATP13A1
CASS4
PLLP
MYLK4
WNK4
VPS25
RPS20
USP30
NIBAN3
ZNF563
GCNT1
ATL2
B4GALNT4
MAIP1
PRMT2
PLCG1
PIK3R1
WBP2
TMEM262
WDR36
REEP5
D2HGDH
RBM28
H4C12
H4C11
H2BC15
H2AC15
BCL3
TMEM258
FEN1
RPL18A
ZNF230
OR10T2
GPR15
CLDND1
CAPG
ZBTB46
KIF2A
BRF2
SV2A
BOLA1
VOPP1
CANT1
RPS13
RAB27B
TACO1
UNC93B1
DYNLT1
SYTL3
ACSF3
CNOT4
TCF3
BHLHE23
ERGIC1
OXLD1
CCDC137
HGS
ARL16
PRDM1
GALK2
THAP11
COPS2
NUTF2
CENPT
ARHGAP27
SUPT7L
SLC4A1AP
TRAT1
JRK
ZNF408
ARHGAP1
ZC3HAV1
MAPKAPK3
IL32
SMO
TTF1
CFAP77
MRPL30
MITD1
ARID3B
ZNF169
NUMA1
LRTOMT
BIK
SWI5
GOLGA2
KRT2
TRAF3IP3
AGPAT3
ZNF527
MTRNR2L1
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
SNX1
CIAO2A
EIF3F
SNRPB
GFI1
TRAF7
RAB26
SCRT1
DGAT1
MFSD2B
OGN
UBE2F
RPS26
MAMSTR
KRR1
MRPS26
GNRH2
FLI1
TBC1D21
CHSY1
ZFYVE21
XRCC3
PIGZ
COMMD2
UBE3C
WIPF1
KIAA0408
KCTD5
CLTC
ASAP1
NANOS3
RIPOR2
ZNF223
NUCB2
PROB1
SLC23A1
MZB1
RUVBL1
ADARB1
TMEM163
TMEM101
SDHAF3
ARL5C
AEBP1
HPS6
ARMH3
ADORA2A
PPP1R1A
AGK
YJU2
C12orf43
MRPL39
LTA4H
ALG10
NFKBIZ
CD47
PA2G4
ZNF570
ZNF569
ACTN4
BTN3A2
PLAGL1
S100Z
ANKLE2
TNFRSF10D
MRPS18C
HELQ
RECQL4
LRRC14
MFSD3
GPT
L3MBTL2
STAT4
TRIM47
STX18
ATP5PO
OSBPL5
IL23R
ZMPSTE24
NOP16
HIGD2A
TMCO2
ITGB3BP
EFCAB7
CASP8
RPL23A
TLCD1
RAB34
PROCA1
GTPBP3
ANO8
S100A5
S100A4
S100A6
S100A3
NCOR2
ALG10B
ZAP70
SUPT4H1
TBC1D19
TUT1
MTA2
SH3BP5
ZNF226
ESCO2
CCDC25
TOX
RGL2
PFDN6
WDR46
IL17RA
DEK
CLMP
MTX3
CXXC5
ADGRE1
MLEC
ARHGEF1
SLC35E1
LAT2
ACTRT3
SAR1B
ATP2A3
AKIRIN2
ENOX2
COX16
GPR160
MKRN3
CACNA2D4