ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035108 | Chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◣ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Igsf8
Atp1a2
Slc1a1
Sec14l1
Plekhh2
Gstm5
Tmem250-ps
T2
Col6a3
Id1
Hipk2
Il34
Klk11
Klk10
Slc14a2
Mtss2
Mdfi
Gjc3
Gnai2
Calml3
Zfp385b
Myadm
Myh14
Dhx32
Aig1
Mark3
Fam89a
Rab17
Rbm25
Lemd1
Fam110b
Clic4
Unc13d
Sh2d5
Mtus1
Col2a1
Sorbs1
Col16a1
Nt5c3
Oacyl
Nacc2
Zfand2a
Cytl1
Ap2m1
Cst6
Catsper1
Phlda1
Csgalnact1
Slc23a4
Ercc2
Erp27
Bhlhe40
Itgb4
Rin2
Myo10
Trhr2
Slc14a1
Gstp2
Gstp1
Rpl27
Ifi35
Cd109
Cldn34d
Ccdc8
Adssl1
Prox2
Zfp532
Alg14
Ccser2
Folr2
Ttyh2
Rpl38
Map4k4
Sppl2a
Klhl21
Col9a2
Fry
Sstr3
C1qtnf6
Acaa1b
Cebpg
Sh3kbp1
Dhrs3
Qpct
Tnfsf10
Etv5
Amotl2
Hexa
Plekhb1
Whrn
Arhgef1
Cd79a
Chic2
Rab11fip4
Klhl22
Map4k5
Atl1
Plb1
Poldip3
Sec16b
Sdc4
Fmod
Klk9
Klk8
Frmd4a
Kif13b
Plcd1
Pmepa1
Slc29a1
Mymx
Tgfbi
Tmco3
Dcun1d2
Cd300c
H2-DMa
Brd2
Dpp7
Actn4
Bmp5
Flot2
Dhrs13
Sh2d3c
Cdk9
Sh3pxd2a
Tut4
Smg9
Hsd11b1
Tanc1
Uqcc2
Fgd4
Sgk3
Prss22
Mrps31
Mast2
Mall
Dlc1
Lsg1
Dab2ip
Sparcl1
Smoc1
Arsg
Sppl3
Fam53c
Cdc25c
Rabggta
Ap5z1
Eno1
Rpl22
Rnf207
Phrf1
Comp
Anln
9530077C05Rik
Ttll10
Pdss2
Msmo1
Ltbp4
Ctxn3
Anks1b
Smim17
Efhd2
Angptl2
Emp1
Septin9
Zfp469
Meltf
Fau
Frmd4b
Lrrc45
Cenpx
Arf2
Ubtd1
Mms19
Denr
Gpr84
Gm14461
Gas7
1700034J05Rik
Slc22a4
Smim24
Gm48552
Fzr1
Dohh
Zfp648
Adgra3
Paip2
Tnfrsf26
Col11a1
Asgr1
Mllt11
Cdc42se1
Il1r1
Fam83f
C1qtnf3
Serpina3n
Kpna1
2310061N02Rik
Ss18l2
Nktr
Sec22c
Cubn
Farp1
1600014C23Rik
Gm33887
Gm29825
Prf1
Bst1
Hip1r
Arntl
Zpld1
Ppp2r5c
Spns2
Itga5
Arhgap19
Ankrd54
Kctd4
Col9a3
Ipcef1
Btbd16
Ldlrad3
Mfn2
Pcyt1a
Tarbp1
Fam53b
Ptger1
Gm973
Bin3
Il1rl1
Gsdme
Trpv4
Ncf2
Zfp24
Sgms2
Gtf3c5
Gpc6
Arsj
Gramd1b
Lbh
Uqcrh
Lrrc41
Ltbp1
Tmem144
Gadd45g
Prune2
Mid2
Cgref1
Abhd1
Tjp2
Zmynd8
Dhx33
Stra8
Col6a1
Slc25a45
Frmd8
Lama4
Fmn1
Il17rb
Chdh
Ank1
Cobll1
Cfap100
Phyhd1
Emb
Ahnak
Prss53
Vkorc1
Tmed4
Ddx56
Tnrc18
Echdc3
Krt79
Rac1
Scube2
Sulf1
Sec14l2
Rnase10
Dnmbp
Ppil3
Nif3l1
Pycrl
Gfus
Slc22a20
Arrdc4
Kcnmb3
Prkdc
Mcm4
Bnip2
Loxl3
Dok1
Clmn
Gc
Cd9
Cbx2
Rbm17
Snai1
Ppat
Paics
Spink2
Oaf
Snx22
Trim47
Top2a
Cldn18
Tbccd1
Dnajb11
Cdyl
Cenpu
Snx24
Wdr36
Pfkp
Tbc1d10a
Uvssa
Tiam2
Slc39a14
Matn3
Pou2af1
Sec11c
Pak6
Hrob
Pacsin2
St3gal3
Tex12
Il18
Bco2
Tmcc3
Ninj1
Aox1
Me1
Dok5
Tbc1d31
Ibtk
Fam240a
Pkn3
Uba3
Arl6ip5
Dnmt1
Nvl
Cnih4
Slc9b2
Dgkd
Itpr3
Gfpt2
Fgfrl1
Fxyd3
Asph
Olig2
Zfp386
Nipal2
Inf2
Msh3
Dhfr
Has1
Pdlim4
Fem1b
Dtx1
Lect2
Slc2a9
Chordc1
Nlrp10
Eif3f
Polg
Timp1
Gstm7
Gstm6
Tgfa
Rapgef1
Krr1
Rubcn
Mpl
Utp3
Nup93
Fam107b
Greb1
Mrpl1
Gsn
Fam169b
Apobec2
Ppfibp1
Kif2c
Nt5e
Niban2
Gast
Mrpl21
Ighmbp2
Parpbp
Nup37
Isy1
Mad1l1
Aldh4a1
Il6st
Mmp15
Cdk5rap2
Sox6
Stk32b
Rbp3
Gdf2
Txndc11
Spty2d1
Zfp748
Vta1
Tram2
Tfg
Nkx2-6
Taf15
Mmp28
Rnf44
Cdhr2
Tuba1b
Mest
Wdr26
Ift27
Plcb2
Rhoc
Ppm1j
Emilin3
Znhit1
Plod3
Rtn4
Crb2
Nfatc2ip
Tex14
Fam166b
Cyb5r3
Ica1
Tekt3
Tsga13
Mmp12
Sp2
Tmem218
Eppk1
BC024139
Chst3
Adamtsl4
Slc39a3
Ppp2ca
Ccdc121
Tmem41b
Il17ra
Gm829
Rpgrip1
Hnrnpc
Tmem212
Adgra1
Med23
Arhgef7
Ubr4
C77080
Dsg2
Tcerg1
Spire1
Tlr5
Col27a1
Kdm1a
Cic
Slc2a1
Serpinh1
Pdzrn4
Dst
Dcp1a
Slc39a4
Vps28
Bend6
Sft2d3
Lims2
Mgat4a
Gpaa1
Exosc4
Snx18
Ecrg4
Ccn4
Slc35e3
Drg2
Angptl4
P4ha2
Ptpre
Ankrd35
Igfbp1
S100a3
S100a2
S100a4
Elf3
Pmp22
Ngef
Mrpl30
Mitd1
Fam25c
Ska2
Prr11
Mtus2
Arid4a
Rnf11
Ptcd2
Mrps27
Flnb
Rnf5
Agpat1
Ager
Kctd14
Il31ra
Tnfaip8
Lrpprc
Bsdc1
Arl4d
Fosb
Plcxd1
Rita1
Ddx54
Fyn
Sox8
Plcg2
Ints1
Aebp2
Mbp
Tubgcp6
Hdac10
Tardbp
Shc1
Lenep
Flad1
Cks1b
Cry2
Sun1
Timm10
Smtnl1
Mideas
Anapc5
Hyal2
Hyal1
Tusc2
Fam135a
Prss46
Prss45
Dcn
Aadacl2
Slc25a41
Khsrp
Cstf2t
Smad5
Rab31
Ppp4r1
Madd
Lats2
Ube2f
Psmd3
Nedd4
Trib3
Eed
Tut1
Dusp12
Ppp6c
Tmed9
B4galt7
Cracd
Fank1
Tnfrsf13b
Gm17455
Glt28d2
Prcc
Gjb1
Sec23b
Rbbp9
Hspa12a
Pdrg1
Xlr3b
Ints10
Snrnp200
1810024B03Rik
Ndufv1
Doc2g
Wwox
St6galnac6
Slc25a25
Nkd1
Kdsr
Atp10a
Piezo1
Rfx1
Fam149b
Ecd
Esm1
Slc35d1
Rab11b
Phyhip
Mat2a
Rps7
Tnn
Calm3
Itgb6
Furin
Bmp4
Ablim1
Gm1604b
Ric8b
Arfgef2
Arhgef3
Jade2
Rnase4
Ang
Smg8
Bach2
Kifc3
Baiap2
Fzd7
Tcea3
Trpm1
Hbs1l
Zfp869
Gnb4
E230025N22Rik
Neurl1a
Cyp4a29
Extl1
Gm5165
Cmklr1
Ywhaq
Kat2b
Hmox1
Gsto2
Tnfrsf8
Mrpl48
Tmem101
1700034E13Rik
Marcksl1
Ap4e1
Panx3
Tmem100
Pde10a
Cln8
Slc35e4
Smox
Glo1
Klf4
Olfr1410
Olfr12
Galk2
Cops2
Smim41
Atg101
Ddx20
Itgb3
Wdfy2
Taf12
Gmeb1
Trub2
Rab21
Trib1
Irf2bpl
Gzmk
Zbtb40
Srsf10
Gucy2g
Mrpl44
Kank2
Tubb5
Mdc1
Card19
Casp6
Sim2
Grin2c
Fdxr
Vars2
Gtf2h4
Ino80c
Knl1
Htra2
Aup1
Dqx1
Numb
Icos
Sema3b
Mgll
Smim3
Hexim2
Mcm3
Snrpc
Nelfa
Map3k5
Btg1
Acrbp
Ing4
Dhx8
Nptxr
Lgals3
Zfp169
Rptor
Creb5
Lmna
Mgp
Ttc7
Mcfd2
Dennd1b
Fam180a
Rgs3
Rab4b
Mia
Sh3pxd2b
Cipc
Rock2
Map3k14
Arpc1b
Zfp738
Krt36
Krt13
Zfp821
Ist1
Shf
Iqch
Aagab
Tgm2
Cct8
Lgals7
Zbtb2
Srp19
S100a10
Enah
Dock1
Cdt1
Aprt
Ipo5
Pde3a
Sema3e
Lmtk2
Rufy1
Znrd1as
Znrd1
Ppp1r11
Rnf39
Pole2
Stk3
Atp6v0a4
Atg12
Ap3s1
Slc33a1
Rhoq
Mat1a
Dad1
Abhd4
Anxa4
Slc27a6
Ehd3
Dhx16
Hilpda
Capns1
Mast4
Hdac2
Get1
Epyc
Kdm6b
Dnajc16
Casp9
Th
Nr1d1
Fgf2
Gcnt2
Tnp2
Socs1
Prm3
Prm2
Proser2
Plec
Abca9
Baz2a
Atp5b
Agfg1
Nos3
Kcnh2
Ptpn3
Nudt2
Kif24
Nuf2
Sertad4
Tns2
Wdr48
Clk4
BC049762
Iqsec1
Bms1
Mapre2
Smad7
Rtn3
Otogl
B3gnt5
Gjb5
Gjb4
Prkci
Tmem167b
Ltbp3
Jam2
Ier3
Flot1
Uxs1
Armc1
Nr1h3
Acp2
Txnl4b
Dhx38
Inka2
Washc1
Ndufv2
Cavin1
Ticam1
Fem1a
Myo5c
Fhl2
Wdr92
Pno1
Col9a1
Sphk2
Spaca4
Rpl18
Fam83e
Rslcan18
Mtmr2
Rab5b
Pmel
Cdk2
Osbp
Hagh
Fahd1
Arl10
4833439L19Rik
Lrwd1
Alkbh4
Cldn10
Ube2j2
Usp4
Gpx1
Col17a1
Yipf2
Timm29
Map9
Gsg1
Tmem260
Dffb
Cep104
Tead4
Tmem63a
Nop14
Grk4
Lefty1
Diaph1
G3bp1
Atox1
Kifc5b
Rbm34
Msi2
Mgl2
Irf2bp2
Dusp22
Mtmr6
Ptov1
Eps8l2
Deaf1
1190005I06Rik
Postn
Ing3
Krtap1-5
Krtap1-4
Krtap1-3
Cltc
Hal
Zmat5
Uqcr10
Prss48
Eif3b
Ier5l
Ugdh
Mmachc
Ccdc163
Ifnlr1
Por
Ergic1
Pde1a
Kctd7
Rere
Katnb1
Gpd1
Gprc5a
Mlph
Micall1
Cblb
Sdc1
Ccn2
Bgn
Car5a
Banp
Prrg2
Prr12
Nosip
Dok2
Prune1
Mindy1
Xlr4a
Xlr3a
Xpo7
Dpp9
Prss56
Acot7
Chrnd
Lrriq3
Fpgt
Ssbp1
Tmed10
Fbxo17
Btbd9
Tbc1d22a
Hspg2
Arid1a
Ripk3
Adcy4
Xlr3c
Rcan1
Abi1
Neil2
Inhba
Ints4
Ctsb
Sgcd
Pcolce2
C2cd5
Acsl1
Krt16
Ubxn10
Limd1
Gm45623
Tubb2a
Cav1
Arhgap11a
Nufip2
Dhrs9
Pkp2
Tulp4
Txndc2
Nup54
Ruvbl1
Znrf4
Lzts2
Filip1
Twnk
Stard13
E030030I06Rik
Papss2
Ahcyl2
Medag
Rdh8
Col5a3
Adipor2
Plekha5
Kcnk3
Slc39a2
Mettl17
Trp53rkb
Srp72
Gipc1
Eif2ak3
Dot1l
Znhit3
Zbtb5
Polr1e
Atp5g2
Ost4
Emilin1
Ndufs2
Adamts4
Tsc22d1
Xab2
Stxbp2
Pet100
Pcp2
Eif1
Cspg4
Slc18b1
Rps12
Cdsn
Micalcl
2300002M23Rik
C130050O18Rik
F13a1
Rrbp1
Dnajc24
Alx1
Anxa11
Dut
Ndufb1
Cpsf2
BC005537
Opa1
Egr2
Gm13290
Gm13289
Gm13285
Gm13279
Gm13278
Gm13275
Gm13287
Gm13288
Upp2
Ifna7
S100z
Tnfaip6