ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028800 | Embryonic gonad
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◣ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

E030030I06Rik
Wdr77
Atp5pb
Cldn34d
Ptcd3
Polr1a
Rpl19
Cacnb1
Tesc
Calm3
Med1
Cdk12
Ift27
Pknox1
Qrich1
Qars
Pik3r3
Phrf1
Arntl
Arid4a
Txndc11
Sharpin
Maf1
Gm35339
Cyc1
Pfdn4
Septin11
Tcp11l2
Tada3
Arpc4
Fus
Lrpprc
Cmc2
Cenpn
Cdiptos
Cdipt
Trir
Get3
Prkdc
Mcm4
Gipc1
Uchl3
Mat2a
Top2a
Dgat2
Taf15
Mmp28
Denr
Shc1
Lenep
Flad1
Cks1b
BC005537
Tigd5
Eef1d
Inip
Cenpe
Uqcrh
Lrrc41
Hyal2
Hyal1
Tusc2
Nfib
Taf6
Mblac1
Cnpy4
Dcun1d4
Tardbp
Caskin1
Pgp
Mlst8
Bricd5
Dut
Mapk8ip1
1700029I15Rik
Psmd5
Cutal
Eif3b
Ptcd2
Mrps27
Olfml2a
Nr6a1
Dnm2
Cnot6
Por
Gpr157
Camta1
Rita1
Ddx54
Hexim1
Ubald1
Mgrn1
Srf
Cul9
Smim24
Gm48552
Fzr1
Dohh
Tepsin
Ndufaf8
Ap3m2
Mfsd13b
Cdr2
Prkci
Slc39a3
Wdr27
1600012H06Rik
Gnb2
Tctn2
Zswim4
Aldh4a1
Tmem218
Arrdc4
Mrps11
Mrpl46
Jun
Ppm1l
Lsg1
Smim41
Atg101
Tmem129
Tacc3
Slbp
Tbc1d17
Pnkp
Akt1s1
Nphp4
Kcnab2
Cnot1
Sp2
Mia2
Dpp9
Dnmt1
Sash1
Styxl1
Mdh2
Fbxw4
Tom1
Rhbdd3
Ewsr1
Ube2d3
Uros
Bccip
Fam227a
Cby1
Smim10l1
Rpgrip1
Hnrnpc
Cln8
Hs3st3a1
Il22ra2
Eif2ak3
Abhd2
Tnnc2
Ube2c
Tmem260
Baz2a
Atp5b
Slc26a8
Mapk14
Asah1
Eed
Ptdss1
Mterf3
Wasf1
Cdc40
Zfp113
Ankrd54
Prmt1
Rmnd5a
Atrnl1
Noct
Zfp383
Zfp27
Rbm39
Uhrf2
Olfr311
Gm12258
Trip10
Gpr108
Traf2
Arap1
Prkaca
Ttll7
Trpm4
Hrc
Psip1
Ankhd1
Pkia
Oxr1
Tmem102
Fgf11
Chrnb1
Elavl2
Eif4a3
Card14
Rpl22
Rnf207
Ttc41
Hsp90b1
Fam53c
Cdc25c
Fam76a
Ndufb1
Cpsf2
Ptov1
Tst
Mpst
Selenop
Rnf5
Agpat1
Ager
Samd4b
Gmfg
Nucb2
Cep135
Ncoa2
Trappc3
Map7d1
Naa35
Slc25a4
Hydin
Smc3
Frat1
Nudt2
Kif24
Rtn3
Axl
Nectin3
Ankfy1
Tmem145
Prr19
Pafah1b3
Mvk
Mmab
C1d
Selenow
Rps6ka5
Fbxo33
Ddx19b
Aars
Rtkn
Wbp1
Ino80b
Bcl6
Ubl5
Pin1
Fbxl12
Siah1b
Nsun3
Fbxo24
Lrch4
Rlbp1
Fanci
Rps7
Tspyl1
Pias2
Glrx5
Tmem198b
Dnajc14
Hdac2
Kmt5c
Chd6
Ccdc85c
Raly
Tmbim6
Per2
Tcerg1
Paip2b
Kctd2
Atp5h
Zfp366
Srbd1
Pawr
Usp1
Rpl12
Lrsam1
Robo1
Zfp341
Pxmp4
Cwc27
Hspa4
Polg
Tnrc6b
Pan2
Il23a
Med30
Nol6
Cd164
Wnt3
Srpk2
Rab28
Zbtb40
Rab5b
Pmel
Cdk2
Timm17b
Pqbp1
Tipin
Fchsd2
Dnajb4
Fubp1
Atf7
Sel1l
Spata25
Ctsa
Zswim1
Mtmr14
Gm5165
Atp8a1
Slc25a41
Khsrp
Eif5
Was
Mthfd2
Mob1a
Ift22
Sufu
Actr1a
2310022A10Rik
Pld3
Madd
Cenpp
Cic
Sos2
Rnpc3
Oscp1
Cacna1h
Map4k4
Fam204a
Stip1
Ttf1
Cfap77
Timeless
Mip
Tmem209
Ssmem1
Rassf7
Lmntd2
Utp18
Mbtd1
Pip4k2b
Dync1h1
Calcoco1
2610008E11Rik
Kat6b
Fdft1
Kansl2
Rpp38
Acbd7
Clnk
Iqch
Aagab
Zfp687
Lamp1
Sipa1l1
Gm17019
Canx
Sarnp
Ormdl2
Gas7
Isoc2b
Add1
Sec23ip
Mcmbp
Hdac1
P2ry2
Gripap1
Slc2a5
Bmp8b
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Nudt1
Ly6g6f
Abhd16a
Ska2
Prr11
Mis12
Derl2
Wrap53
Trp53
Kdm4b
Zfp691
Myl12a
Pycr2
Micos10
Srgap2
Fam72a
Ephb2
Cct5
Atpsckmt
Psmb2
Mucl3
Sh3glb2
Miga2
Dalrd3
Wdr6
Paxip1
Enpep
Prpf40a
Arl6ip6
Uba1
Rraga
Immp1l
Elp4
Rlim
Tle2
Uqcrq
Leap2
Gdf9
Scamp5
Supt5
Meis1
Zfp574
Grik5
Spag8
Hint2
Gm20346
Anp32a
Zbtb17
Srarp
Stxbp4
Cox11
Hnrnpr
Wdr45
Edrf1
Mbp
Maco1
Tjp3
Pip5k1c
Uchl1
Uhrf1bp1
Galnt10
Mogs
Rbm15
Bpgm
Acat2
Git2
Ankrd13a
Zfyve21
Xrcc3
Bub1
Idh3b
Pold4
Ptch1
Frem3
Gm10354
Ttbk2
Tmprss3
Prdm10
Gm7244
Smarcal1
Dcaf11
Ss18
Nudcd2
Hmmr
Flcn
Recql
Golt1b
Nr5a1
Rpusd3
Rbm27
Relch
Pign
Cemip
Rps19
Tbccd1
Dnajb11
Rnf44
Cdhr2
Bckdhb
Palb2
Dctn5
Zbtb5
Polr1e
Kdm2b
Xrcc1
Pinlyp
Ensa
Tmem88
Naa38
Cyb5d1
Zfand3
Zfp143
Hbp1
Aacs
Junb
Hook2
Katnb1
G3bp1
Atox1
Kdm4a
Tubb4b
Slc34a3
Fam166a
Dcaf7
Fam222a
Sp1
Speer4e
Rcl1
Narf
Cybc1
Zfp869
Orai3
Rpn2
Mroh8
Glce
Ppp6r3
Ap2a1
Rfx1
Psmb3
Pcgf2
Cfap73
Setd1a
Ppm1b
Dcps
Kctd9
Cdca2
Gatad2a
Sec1
Dbp
Car11
Ubald2
Osbp
Evi5l
Rps6ka2
Rab11b
Sult6b2
Greb1
Nkx2-6
Kpna1
T2
Hexb
Il31ra
Olfr806
Wwox
Abhd6
Rab11fip4
Jag2
Gnai2
Myh14
Prox2
Akirin1
Cbr3
Tmem125
Atg12
Ap3s1
Slc14a2
Sspn
Vmn2r102
Kmt2a
Col16a1
Olfr855
Olfr854
Aldh9a1
Itgb4
Bhlhe40
Sec14l1
Dlst
Lrrc56
Hras
Wasl
Tecpr1
Cox8c
Ndst2
Sod2
Cdhr4
Calml3
Fgd4
Zfp949
Srxn1
Igsf8
Gstm5
Atp1a2
Diaph1
2900026A02Rik
Ajuba
Cerk
Inka1
Aadacl2fm1
Dhrs3
Acacb
Ttll10
H2-DMa
Brd2
Znhit1
Plod3
Slc1a1
Osbpl1a
Frmd4a
Ppp1r13l
Cd3eap
Col6a3
1700016H13Rik
Zfp469
Arhgef1
Ap2m1
Rps27l
Hmox2
Rps29
Lrr1
Mtss2
Zfp219
Tmem253
Uba7
Setd4
Cbr1
Cd209a
Ube2b
Cdkl3
Fam20b
Arl2
Col6a6
Dot1l
Nemf
Atp6v0c
Amdhd2
Phlda3
Myadm
Bzw1
Cdca7l
Bzw2
Ankmy2
Rbm25
Amotl2
Ccser2
Niban2
Mylip
Mtf2
Id1
Cdt1
Aprt
Nmral1
Rnasek
0610010K14Rik
Olfr1274
Pa2g4
Etv5
Il34
Gm17660
Rusc2
Cenpu
Lfng
Cd79a
Apobec2
Smim4
Nt5dc2
Crybg1
Smg9
Pramel32
Ifna13
Dab2ip
Evpl
Akt2
Fbxl14
Nt5c3
Rarg
Ilf2
Sema3b
Fstl3
Sec23b
Rbbp9
Dnah7b
Tgfbi
Rpl27
Ifi35
Hipk2
Zmynd8
Mark3
Cul2
Slc35e2
Them6
Slurp1
Psca
Oacyl
Plekha1
Sfi1
Ss18l2
Nktr
Tmem41b
Kctd14
Mdfi
Tjp2
Dhx32
Cytl1
Bmp5
Arhgef4
Prss57
Cspp1
Cops5
Rsph3b
Mfsd8
Kremen1
Zfp24
Gm525
Iqsec1
Arhgef3
Eif4enif1
Irf2bp2
Zscan25
Atp5g1
Frat2
Oasl1
Zfp821
Gjc3
Mrpl21
Ighmbp2
Trhr2
Sigmar1
Arid3c
Uqcc2
Extl1
Slc14a1
Fgfrl1
Dst
Sh2d5
Aig1
Fam149b
Ecd
Tmem250-ps
Tcp11
Ier2
Rin2
Lemd1
Erp27
Ahnak
Plekhh2
Fam110b
Espn
Atg16l2
Rbbp6
Nfatc2ip
Fkbp3
Fancm
Nfe2
Tspan4
Polr2l
Cd151
Sstr3
Smim38
C1qtnf6
Limch1
Cltc
Sh3kbp1
Hal
Sgms1
Otogl
Fxyd3
Sorbs1
Ttc14
Msmo1
Susd6
Slc23a4
Rab21
Bcl9l
Cst6
Bmp4
Spc25
G6pc2
Med23
Rab17
Col2a1
Prxl2b
Klk11
Klk10
Clasp2
Klhl21
Dap3
Bsdc1
Ube2a
Rel
Zcchc14
Abhd18
1700034I23Rik
Isy1
Clic4
Npr1
Nepn
Gopc
Sec22c
Rgs3
Gzmk
Cttnbp2nl
4930564D02Rik
Spty2d1
Fam89a
Spire1
Polr1b
Vwa1
Snx22
Anln
9530077C05Rik
Marchf3
Slc30a5
Mpl
Tex14
Olfm1
Cwc22
Gstp2
Gstp1
Arhgap19
Tle3
C330007P06Rik
Matn3
Catsper1
Plekhb1
Nacc2
Frmd6
Trim7
Trim41
Sirt4
1700034J05Rik
Serpinb5
Poldip3
Fbxo9
Cobll1
Cilk1
Smim17
Trpv4
Smoc1
Trib1
Limk2
Tarbp1
Aph1b
Fam227b
Dtwd1
Zfp945
Tuba1b
Smg8
Mdm2
Mllt11
Cdc42se1
Cdc42ep4
Slc25a25
Tacc1
Proser1
Nhlrc3
Rab4b
Mia
Gli2
Wdr92
Pno1
Hexa
Acaa1b
Ireb2
Letm1
Mrps31
Me1
Sgk3
Unc13d
Zfp526
Dedd2
Col9a3
Cdca8
9930104L06Rik
Gm10710
Efhd2
Dchs2
Col9a2
Fam83b
Spink2
Tmem94
Sdc4
Cyth1
Mbnl2
Fbp2
Zfp386
Myl12b
Mansc1
Wnt10b
Haspin
Lama4
Car5a
Banp
Slc29a1
Mymx
Gm51425
Fam3c
Ergic1
Tmem18
Rasip1
Izumo1
Gm5591
Zfp385b
Micall1
Stat3
Adnp
Pcdh20
Hexim2
Copz1
Ltbp4
Slc35e3
Zfp748
Parpbp
Nup37
Meltf
Cebpg
Whrn
Armc1
Vgll4
Zfp532
Xpc
Utp3
Shc4
Lsm3
Id2
Ercc2
Zxdc
Cct8
Ulk1
Chic2
Zfand2a
Nlk
Spns2
Septin9
Mtus1
Zdhhc5
Gm33887
Arhgef19
Ndst1
Sparcl1
Alg14
Actr3
Aff1
Pygo2
Pbxip1
Tmed4
Ddx56
Mrpl1
Prrt1
Ppt2
Kpnb1
Abtb2
Hnrnpa2b1
Cbx3
Sympk
Cd9
Papss2
Gramd2
Rsph3a
Ablim1
Col6a1
Fer
Ttyh2
Rpl38
Knl1
Zbtb4
Slc35g3
Polr2a
Gpr84
Eef2
Mtch2
Ints10
Fam53b
Folr2
Pou2af1
Cd109
Adgra3
Mrpl30
Mitd1
Tbc1d10a
Ngdn
Malt1
Arf2
Usp20
BC005624
Pmaip1
Hip1r
Rac1
Klhl22
Comp
Abca3
Abca17
Wdr36
Rabggta
Nedd4
Ss18l1
Psma7
Rab40c
Mrpl44
Zfp648
Tedc1
Slc25a42
Bbs2
Tpt1
Eea1
Uvssa
Cgref1
Abhd1
Slc36a4
Sh3bp1
Glo1
Tnrc18
Fry
Kif13b
Frmd4b