ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Cdk9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◣ Cdk9: Average

◢ SRX104410: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Greb1
Nkx2-6
Txndc11
Cldn34d
Kpna1
Hexb
Il31ra
Olfr806
Abhd6
Aldh9a1
Sspn
E030030I06Rik
Olfr1274
Wwox
Gm10710
Dchs2
Osbpl1a
Pknox1
Tmem125
Cd209a
Aadacl2fm1
Setd4
Cbr1
Fbxw4
Dnah7b
Col6a6
Cerk
Rsph3b
Gm525
Cox8c
Csf2ra
Pramel32
Ifna13
Fyco1
Ube2a
Zfp945
Pgk1
Acacb
Zfp949
Tmem267
Cdh12
Tecpr1
Rsph3a
Vmn2r4
Sympk
Olfr855
Olfr854
Slc14a2
Pald1
Nemf
Scrib
Calcoco1
Oasl1
Fam227b
Dtwd1
H3c6
H1f3
Vmn2r102
H2bc8
H2ac8
Unk
H3f3b
Abca3
Abca17
H3c15
H3c14
H2ac19
H2ac18
Zfp143
Tex14
Kif2c
Actb
9430015G10Rik
Zfp791
Atp5g1
H2bc6
H4c14
H3c13
H2bc18
H3c3
H2bc3
Ubc
H4c6
Clcn4
Rptor
Mrpl44
Gm3448
Gm3417
Syngr1
Rpl3
Chac1
H1f2
Errfi1
Eapp
Zfp513
Snx17
Eif2b4
Sfi1
Eif4enif1
Gtf3c6
H4c4
H3c4
Xcr1
Ap1g1
Nabp1
Hspa5
Ddx23
Prcc
Tmem18
Cnot1
Dync1i2
Rps29
Phf12
Lrr1
Car5a
Banp
Mcl1
H3c8
Gm14595
Gm14590
H2bc21
H2ac21
H2ac20
Rps19bp1
Atf4
Actg1
H2bc7
H2ac7
Opa1
9030025P20Rik
Taf12
Gmeb1
Slc39a4
Cpsf1
Aaas
Nr4a1
Tinf2
Nedd8
Gmpr2
Gm3435
H4c9
H3c7
H2bc9
H2bc12
H2bc11
H2ac12
H2ac11
Srsf2
Mfsd11
Chmp6
Ifrd1
Arl4d
Lima1
Calm1
Arntl
Polg2
Ddx5
Cep95
Copz1
Jund
H4c11
Iqcn
H4f16
H2aj
Phb
Dusp2
Astl
Tent5c
Cltc
H3c10
H2bc13
H2ac13
Tmed2
Rilpl1
H3c11
H2bc22
H2ac22
H1f5
Mettl23
Jmjd6
Pprc1
Trp53rkb
Pus1
Ep400
Slc39a1
Crtc2
H3c2
Eef1a1
H2ac4
Tbcd
Ttc39d
H4c2
Pds5b
N4bp2l2
Eef2
Dapk3
Pcdh20
Tcte3
Sepsecs
H1f4
Ermard
Gzmk
Usp48
Mettl25
Ccdc59
Mrpl19
Shc1
Egr1
H2bc14
H2ac10
Mtg1
H4c1
LOC666331
Gm11634
Ccn1
H4c8
S1pr4
Ncln
H4c3
H1f6
Sp1
H3c1
Fitm2
Znfx1
Poldip3
Nme1
Tpm1
H4c12
H2bc15
H2ac15
Lsmem2
Pex14
Sharpin
Maf1
Gm35339
Cyc1
H4bc24
H2bc23
H2ac24
H2ac23
Ppig
Dusp1
Ctnnb1
Phlda1
Gm13285
Gm13290
Gm13289
Foxa3
Nop14
Grk4
Ap2m1
Tle3
Ndufs7
Rps20
Ube2j2
Htra2
Dqx1
Aup1
Ndufaf5
Esf1
Tmem88
Naa38
Cyb5d1
Krr1
Wdr70
Mrpl39
Chmp4b
Dcaf5
Zbtb4
Atf6
Hmbs
H2ax
Dpagt1
Naa80
Ifrd2
Hyal3
Dcp1a
Hgsnat
Slc35g3
Polr2a
Med6
Ier2
Lenep
Hspa8
Mtf2
Nup155
Eif2b5
Dhx33
Crebl2
Sirt4
Atp5o
Gpr84
Dnajc16
Casp9
Tti2
Olfm1
Pigu
Drg2
Btg1
Muc3
Plekhn1
Klhl17
Tmem107
Cenps
Dnttip2
Dhx16
H2bc4
H2ac6
Arl14ep
Ufl1
Smg8
Ncbp2
0610012G03Rik
Fus
Tsfm
Mterf1b
Tmem115
Fastkd1
Tctex1d2
Cdkn2aipnl
Hsph1
Sec61a1
Rdm1
Snx18
Ndufa9
Akap3
Zc3h6
Zfp598
Gm13287
Gm13279
Gm13278
Gm13275
Prdx2
Junb
Ifnz
Lmna
Dmap1
Thbs1
Gm13272
Get1
Tmem168
Med23
Uqcc3
Ubxn1
Get4
Flad1
Cks1b
Tob1
Proser1
Nhlrc3
Med17
Ndufs4
Gm13288
Prdx1
Serpine1
Sass6
Tctex1d4
Btbd19
Lrrc59
Mterf1a
Tab1
Retsat
Elmod3
H4c17
Rbl2
Zdhhc1
Pold3
Ifng
Zfp637
Cotl1
Mrpl35
Immt
Eif4a2
Cirbp
Usp5
Cdca3
Ccdc9
Psmd7
Mff
Zfp207
5730455P16Rik
Rcc1
Ttc4
Rhot1
Mat2a
Psmd3
Nprl2
Cyb561d2
Tsnaxip1
Snrpc
Ranbp10
Zcwpw2
Pcbp1
Azi2
Sde2
Kpnb1
Gtf2b
Rplp0
Gcn1
Nfat5
Ccl1
Hnrnpa2b1
Cbx3
G3bp1
Dffb
Cep104
Atox1
Mrpl20
Ccnl2
Sphk2
Spaca4
Rpl18
Fam83e
Tmed9
B4galt7
Dpy19l4
Btrc
Rad54l2
Pcif1
Klf7
Uspl1
H4c18
Ccn2
Matr3
Mtmr10
Ptgs2
Fbxl18
Terf2
Zfand5
Odc1
Gsk3a
Ccnl1
Napepld
Anapc5
Gatb
Med27
Mapkapk5
Rpp30
Zpr1
Nup153
Bud13
Timm13
Ndufs3
Lmnb2
Kbtbd4
Malt1
Eif4e2
Chrng
BC107364
Rab33b
Setd5
Pigq
Nhlrc4
Ier3
Flot1
Snx5
Mgme1
Ddit4
Tmem101
Cox6c
Fam166a
Phf23
H1f1
Gabarap
Dvl2
Trmo
Ppia
Gpn3
Fam216a
Sec31b
Ndufb8
Insig1
Hif1an
Slc39a13
Rbm39
Mrpl21
Ighmbp2
Slc33a1
Nup54
Rbm17
Fth1
Stpg3
Scaf1
Rras
Tob2
Clptm1l
Rassf1
Snrpd3
Gucd1
Palb2
Dctn5
Wasf3
Cul2
Clpb
Adpgk
Eif5
Galk2
Cops2
Cluh
Pole4
Gabpb2
Id3
Fam174c
Chordc1
Npw
Mmachc
Kat7
Ccdc163
Rnf123
Prkdc
Mst1
Mcm4
Hnrnph3
Tmem11
Rpia
Rhebl1
Kmt2d
St3gal2
Usp30
Svop
Pole3
Alad
4933430I17Rik
Atp5g2
Thap11
Nutf2
Cenpt
Il2ra
Capn15
Gm13277
Crlf3
Atad5
Ncl
Hsp90aa1
Dgat1
Bod1l
Kansl2
Rasip1
Nuf2
Mapkbp1
Srsf1
Rps3a1
Nip7
Cog8
Pdcd7
Fam53c
Cdc25c
Wdr36
Epg5
Ppp1r11
Gm13276
Trim50
Fkbp6
Slc35b2
Kdm5a
Ccdc77
Ppp1r10
Mrps18b
Gtf2ird2
Atat1
Mt1
Dusp5
Dok3
Ddx41
Ttyh2
Rpl38
Ythdf2
Tkfc
Raf1
Psmg3
Ddb1
Vta1
Tarbp2
Npff
Map3k12
Vim
Setdb1
Gmfb
Cgrrf1
Stx16
Mrpl58
Trp53rka
Ndufc2
Mrpl1
Nelfa
Ubb
Sp2
Gtf3c3
Ppp6c
Rnf10
Herpud1
Coq5
Aacs
Sdad1
Pafah2
Adnp
Zfpl1
Vps51
Tmem262
Cdca5
Ska2
Prr11
Yipf2
Timm29
Zbtb37
Lpcat2b
Btbd8
Larp4
Smarca4
Mt2
Tmem129
Tacc3
Slbp
Ulk2
Srp68
Galr2
Rabggtb
Fra10ac1
Zfyve19
Trib3
Dnajc17
Tgfbr3l
Fubp1
Dnajb4
Yars
S100pbp
Tmem167b
Stx18
Slc38a2
Slc25a32
Dcaf13
Aldoa
Slc9a1
Epc1
Rubcn
Fyttd1
Ctdp1
Zfp868
Srp19
Ncor1
Eif1
Cbr3
Tmem211
Tyw3
Snrpa1
Eif3c
Cryz
Trip4
Rps8
Pclaf
Taco1
Psd
Fbxl15
Ccdc88a
Ptpn6
Hnrnpab
Grcc10
Ttc41
Hsp90b1
Map1lc3b
Dis3l2
BC005537
Ccl4
Ier5
2610001J05Rik
Fem1b
Xpc
Snrpd1
Secisbp2
Lsm3
Kbtbd7
Esco1
Cks2
Nr1h3
Acp2
Gspt1
Puf60
Ints12
Gstcd
Vps72
Pip5k1a
Nufip2
Commd1
Cct4
Ankrd40
Dnajb12
Sgk1
Birc2
Tnf
Psmd12
Pitpnc1
Ltb
Lta
Znrd1as
Znrd1
Timm50
Nfkbia
Trdmt1
Hmox1
Pbld2
Fam214b
Faf1
Cdkn2c
Rabl6
Celf2
Ccdc183
Timm22
Spns1
Plk2
Nxn
Lat
Gm2237
Tm7sf2
Snw1
Cipc
Cep128
Pde6d
Cops7b
Psat1
Mad2l1bp
Irak2
Gtpbp2
Dnajc11
Cep63
Anapc13
Slc18b1
Slc3a2
Rnf39
Cdkn2d
Klhdc4
Blmh
Atg16l1
Hsp90ab1
Dus1l
Mphosph10
Mcee
Izumo1
Fut1
Fgf21
Klhl18
Kif9
Thap3
Phf13
Armc5
9130023H24Rik
Hjurp
Haspin
A730008H23Rik
Msh4
Gapdh
Morf4l1
Armc1
Trmt44
Exosc6
Acox3
Zfp869
Zfp668
Zfp646
Smarcal1
Hexim2
Nvl
Fam149b
Eif4a1
Ecd
Cnih4
Cd68
Pemt
Rnf7
Zc3h10
Rpl41
Fkbp1a
Tmem242
Gsdma2
Zmynd10
Tbc1d31
Zfp988
Ube2z
Prr12
Mrps33
Smn1
Luc7l
Fam234a
Borcs7
Vpreb1
Tspoap1
Top3b
Mtrex
M6pr
Igll1
Dhx29
Nfkbil1
Ddx39b
Atp6v1g2
Tiparp
Rgs1
Nubp1
Ccl3
Pdf
Lars
Dcps
Sfxn5
Sec24a
Sar1b
Zar1l
Tchp
Tatdn3
Nsl1
Brca2
Psmb2
Flnc
Efcab2
Dcaf10
Sec22b
Knl1
Agk
Tnfaip8l2
Tmod4
Scnm1
Lysmd1
H2-DMa
Tspan4
Snrpe
Polr2l
Frg2f1
Foxj3
Cd151
Srsf5
Tmed6
Rcc1l
Gtf2a1
Stat1
Pkm
Mvk
Mmab
Ube2g1
Inpp5k
Rprd2
Suz12
Diaph1
Ppip5k2
Plag1
Gin1
Chchd7
Zfpm1
Vmn2r82
Mrps15
Lamtor5
Tuba1b
B9d1
Pdss2
Dus2
Ddx28
Olfr819
Rdh14
Chrac1
Atp6v1h
Prrg2
Nosip
Brf1
Snrnp27
Pacsin3
Esyt2
Arfgap2
Dhx30
Tmem123
Rel
Mrps2
1700007K13Rik
Ints5
Ganab
1810009A15Rik
Ube3c
Tpt1
Pigl
Pfdn5
Myg1
LOC547349
Ahcyl1
Map2k2
Creb3l3
Zfp846
Katnb1
Eps15
Tekt2
N6amt1
Eci1
Dexi
Clec16a
Adprhl2
Zfp189
Rps12
Pten
Mrpl50
Ankar
Vrk1
Usp31
Ptbp1
Pop7
Tmem214
Pgp
Mlst8
Mapre3
Bricd5
Ankle2
Zglp1
Zfp36l1
Slc35b4
Nfyc
Wdr5
Zfp963
Rps21
Eif3a
Idh3b
Bicd2
Stau1
Invs
Erp44
Scfd1
P4ha1
Wnk1
Acer3
Hnrnph1
Dync1h1
Lonp1
Catsperd
G3bp2
Cct8
Txnl1
Tubb4b
Slc34a3
Kmt2a
Wdyhv1
Ikzf5
Cwc22
Atad2
Acadsb
Mbd6
Ddit3
Olfr62
Dnajb1
9530077C05Rik
Ptp4a2
Rpl5
Gid8
Dido1
Sbno2
Trmt1
Nacc1
Hmx2
Chchd6
Bub3
Sf3a3
Urgcp
Rpl27
Rnf44
Pcbp2
Ifi35
Trmt10a
Tmem43
Mttp
Chchd4
Cds2
Arl8b
Snapc2
Slc25a10
Mrpl12
Ctxn1
Eefsec
Tmem50a
Syf2
Rsrp1
Ormdl3
Aasdh
Commd2
Bms1
Trmt10c
Slc44a2
Polr2m
Pcnp
Ap1m2
Tmem205
Rab3d
Max
Fbxo31
Ccdc159
Mis12
Irf2bpl
Derl2
Rabac1
Dnaja1
Srek1
Txn1
Pomp
Pofut2
Rad50
Nfe2l2
Rab1a
Clcn7
Tmpo
Tapbp