ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130589 | Neural tube
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◣ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

T2
Rab11fip4
Greb1
Hexb
Cldn34d
Kpna1
Nfe2
Col16a1
Wwox
Olfr806
Rarg
Slc44a3
Cdc42ep4
Myh14
Dab2ip
E030030I06Rik
Abhd6
Fgd4
Vangl2
Rlbp1
Fanci
Fbp2
Txndc11
Otogl
Smg9
Apobec2
Ier2
Setd4
Cbr1
Smim38
Inpp4a
Il31ra
Aadacl2fm1
Olfr1274
Nkx2-6
Vgll4
Bhlhe40
Aldh9a1
Foxp2
Sec23b
Rbbp9
Frmd4a
Sema3b
Ccdc69
Cemip2
Mtf2
Kctd14
Psma8
Unc13c
Rara
Tent5c
Sema4d
Gm10710
Dchs2
Srxn1
Lrrc75b
Ggt1
Col6a6
Rgs8
Sympk
Foxa3
Etv5
Slc35a3
Tmem267
Bmp5
Bsdc1
Bcl9l
Tecpr1
Tmem18
Gm525
Adcy5
Tmem125
Shc4
Slc14a2
Mfsd8
Mbnl1
Cobll1
Cd209a
Extl1
Arhgef1
Amotl2
Rbfox2
Fbxw4
Prrg4
Rai1
St3gal4
Cdhr4
Inka1
Uba7
Gm17660
Arhgef3
Ap3m2
Dnah7b
Oat
Clasp2
Zfp469
Fgfrl1
Abtb2
Tmem115
Sox5
Tox2
Tle3
Cerk
Sox8
Chadl
Lmf1
Pramel32
Ifna13
Sspn
Mapk6
Abhd18
1700034I23Rik
H2-DMa
Brd2
Mycbpap
Rgs3
Rab4b
Mia
Padi2
Cyth1
Rnf38
Ccser2
Pp2d1
Pgpep1
Pbx2
Gpsm3
Irf2bp2
Papss2
Osbpl1a
Ccdc90b
Arhgef17
Tsc22d1
Aaas
Ss18l2
Nktr
Sec22c
Zfp637
Vmn2r102
Med4
Duxbl3
Duxbl2
Duxbl1
Spire1
Mbnl2
Ak1
Myadm
Fzd2
Ddx1
Atp5g1
Plekhf2
Zbtb18
Cap1
Kcnj16
Gstm5
Lekr1
Ankfn1
Dcaf5
Lamp1
Cxcl11
Sphk1
Cnn3
9430038I01Rik
Cttnbp2nl
4930564D02Rik
1700034J05Rik
Gfpt1
Lrrc8a
Rusc2
Colgalt2
Ppdpf
Pld1
Ptk7
Phldb1
2900026A02Rik
Hgsnat
Cxxc5
S1pr2
Magi1
Calr4
Cpa5
Phc2
Ptpre
Rsph3b
Cltc
Stard3
Ppp1r1b
Me1
Pygo2
Pbxip1
Rhoj
Limch1
Abca3
Abca17
Marcksl1
F830045P16Rik
Kras
Stat5b
Abr
Notch1
Mrc2
Prdm2
Plod2
Prickle1
Calcoco1
Ttll10
Rrm1
Rfk
Ncaph
Itpripl1
Csrnp3
Tgm2
Gm3776
Pde6a
Sec14l1
Igsf8
Fxyd3
Arhgef10l
Nuggc
Col9a3
Ogfr
Arhgef19
Sfi1
Nt5c2
Mtss1
1700029P11Rik
Grin2b
Dcdc2a
Ncf2
Veph1
Pcdh1
Plod1
2510039O18Rik
Sorbs2
Lep
Lcat
Psmb10
Ctrl
Tbc1d10a
Gm51573
Arsi
Crybg1
Sort1
Cntn1
Grk5
Comp
Wdr62
Clip3
Fmnl2
Rnf44
Cdhr2
Tjp3
Pip5k1c
Iqch
Aagab
Phrf1
Denr
Cmc2
Cenpn
Prkdc
Mcm4
Cnot6
Mia2
Pknox1
Ptcd2
Mrps27
Fam53c
Cdc25c
Flcn
Jag2
Gipc1
Gnai2
Por
Rita1
Ddx54
Calm3
Kctd2
Atp5h
Taf15
Mmp28
Git2
Ankrd13a
Prox2
Tardbp
Dut
Akirin1
Cbr3
Lrpprc
Septin11
Wdr45
Atg12
Ap3s1
Tmem129
Tacc3
Slbp
Asah1
Prdm10
Tigd5
Eef1d
Ift27
Cln8
Sash1
Gm7244
Was
Dnmt1
Aldh4a1
Kmt2a
Ndufb1
Cpsf2
Cdiptos
Cdipt
Olfr855
Olfr854
Caskin1
Arntl
Ptov1
Uqcrh
Lrrc41
Madd
Prkci
Itgb4
Hyal2
Hyal1
Ptdss1
Mterf3
Ptcd3
Polr1a
Eif3b
Psip1
Rmnd5a
Dlst
Eed
Rpl22
Rnf207
Pgp
Mlst8
Bricd5
Hdac2
Tmem260
Uchl3
Fus
Shc1
Lrrc56
Hras
Wasl
Ppm1l
Arid4a
Smim41
Rtn3
Atg101
Arrdc4
Cenpe
Tada3
Arpc4
Ccdc85c
Cox8c
Ndst2
Tusc2
Sp2
Cenpp
Nphp4
Noct
Kcnab2
Sod2
Rpn2
Mroh8
Smim24
Gm48552
Fzr1
Dohh
Ly6g6f
Calml3
Abhd16a
Tst
Mpst
Atrnl1
Zfp949
Cd164
Galnt10
Fbxo33
Gnb2
Atp1a2
Trappc3
Map7d1
Diaph1
Polg
BC005537
Ajuba
Qrich1
Qars
Lenep
Flad1
Cks1b
Dhrs3
Pik3r3
Acacb
Med1
Cdk12
Ss18
Raly
Znhit1
Plod3
Lsg1
Baz2a
Slc1a1
Uros
Bccip
Junb
Bcl6
Rpl19
Cacnb1
Ppp1r13l
Cd3eap
Col6a3
Smc3
Wdr77
Atp5pb
Myl12a
Dgat2
1700016H13Rik
Trir
Get3
Hook2
Ap2m1
Pkia
Rps27l
Hmox2
Rps29
Lrr1
Sharpin
Maf1
Gm35339
Cyc1
Pfdn4
Mat2a
Top2a
Tcp11l2
Ankrd54
Mtss2
Fam227a
Cby1
Zfp219
Tmem253
Rhbdd3
Ube2b
Cdkl3
Eif2ak3
Fam20b
Cwc27
Ska2
Prr11
Arl2
Ephb2
Ewsr1
Dot1l
Rfx1
Nemf
Atp6v0c
Amdhd2
Phlda3
Dpp9
Bzw1
Paxip1
Cdca7l
Abhd2
Bzw2
Ankmy2
Rbm25
Rpgrip1
Hnrnpc
Taf6
Mblac1
Cnpy4
Niban2
Mylip
Mapk8ip1
1700029I15Rik
Id1
Per2
Ttll7
Cdt1
Aprt
Selenow
Nmral1
Rnasek
0610010K14Rik
Slc39a3
Tepsin
Ndufaf8
Pa2g4
Rnf5
Agpat1
Ager
Il34
Cnot1
Atp5b
Cenpu
Lfng
Cd79a
Smim4
Nt5dc2
Robo1
Evpl
Akt2
Trip10
Mtmr14
Gpr108
Fbxl14
Tmem218
Cic
Nt5c3
Ilf2
Idh3b
Srbd1
Fstl3
Tgfbi
Tbc1d17
Pnkp
Akt1s1
Dnm2
Rab5b
Pmel
Cdk2
Osbp
Tnnc2
Rpl27
Ifi35
Hipk2
Nudt2
Kif24
Zmynd8
Slc25a41
Khsrp
Mark3
Cul2
Slc35e2
Them6
Slurp1
Psca
Oacyl
Tmem145
Prr19
Pafah1b3
Tcerg1
Plekha1
Wasf1
Cdc40
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Ube2c
Tmem41b
Mdfi
Tjp2
Tom1
Dhx32
G3bp1
Atox1
Frat1
Trpm4
Hrc
Cytl1
Arhgef4
Prss57
Oxr1
Cspp1
Cops5
Kremen1
Zfp24
Traf2
Iqsec1
Eif4enif1
Zscan25
Frat2
Nfib
Oasl1
Zfp821
Zfp143
Pip4k2b
Gjc3
Zfp869
Mrpl21
Ighmbp2
Trhr2
Sigmar1
Arid3c
Uqcc2
Slc14a1
Dst
Sh2d5
Rtkn
Paip2b
Aig1
Inip
Fam149b
Ecd
Tmem250-ps
Prpf40a
Arl6ip6
Tcp11
Tnrc6b
Rin2
Lemd1
Erp27
Ahnak
Plekhh2
Fam110b
Espn
Atg16l2
Rbbp6
Nfatc2ip
Sp1
Fkbp3
Fancm
Mrps11
Mrpl46
Tspan4
Polr2l
Cd151
Sstr3
C1qtnf6
Camta1
Ubald1
Mgrn1
Sh3kbp1
Rab11b
Rbm39
Hal
Sgms1
Ankhd1
Fchsd2
Gas7
Sorbs1
Fbxo24
Ttc14
Styxl1
Mdh2
Msmo1
Susd6
Slc23a4
Rab21
Cst6
Bmp4
Hexim1
Spc25
G6pc2
Med23
Rab17
Col2a1
Prxl2b
Klk11
Klk10
Klhl21
Rab28
Kmt5c
Dap3
Ube2a
Rel
Dync1h1
Zcchc14
Gm5165
Isy1
Clic4
Psmd5
Npr1
Rassf7
Lmntd2
Cct5
Atpsckmt
Lrch4
Nepn
Gopc
Gzmk
Uchl1
Spty2d1
Fam89a
Polr1b
Zswim4
Vwa1
Snx22
Anln
9530077C05Rik
Marchf3
Mis12
Derl2
Slc30a5
Mpl
Tex14
Utp18
Mbtd1
Eif4a3
Card14
Olfm1
Cwc22
Gstp2
Gstp1
Nol6
Arhgap19
C330007P06Rik
Prkaca
Meis1
Uba1
Matn3
Plekhb1
Nacc2
Catsper1
Frmd6
Trim7
Trim41
Sirt4
Jun
Stip1
Serpinb5
Olfml2a
Nr6a1
Srgap2
Fam72a
Poldip3
Fbxo9
Cilk1
Smim17
Wdr27
1600012H06Rik
Trpv4
Smoc1
Trib1
Limk2
Tarbp1
Zfp687
Aph1b
Katnb1
Fam227b
Dtwd1
Zfp945
Tuba1b
Smg8
Mdm2
Mllt11
Cdc42se1
Tctn2
Smarcal1
Glrx5
Slc25a25
Zfp383
Zfp27
Map4k4
Tacc1
Proser1
Nhlrc3
Gli2
Wdr92
Pno1
Hexa
Acaa1b
Ireb2
Letm1
Mrps31
Sgk3
Unc13d
Axl
Zfp526
Dedd2
Cdca8
9930104L06Rik
Efhd2
Col9a2
Atf7
Fam83b
Spink2
Tmem94
Sdc4
Zfyve21
Xrcc3
Hdac1
Atp8a1
Zfp386
Myl12b
Mansc1
Ttf1
Cfap77
Ubl5
Pin1
Fbxl12
Glce
Wnt10b
Fam204a
Haspin
Tmem198b
Med30
Dnajc14
Lama4
Pan2
Il23a
Sec1
Dbp
Car11
Slc26a8
Mapk14
Car5a
Banp
Evi5l
Cutal
Slc29a1
Mymx
Gm51425
Fam3c
Ergic1
Rasip1
Izumo1
Gm5591
Zfp385b
Micall1
Stat3
Adnp
Pcdh20
Hexim2
Copz1
Ltbp4
Slc35e3
Zfp748
Parpbp
Nup37
Meltf
Cebpg
Whrn
Armc1
Kdm4a
Zfp532
Xpc
Utp3
Lsm3
Id2
Ercc2
Zxdc
Cct8
Ulk1
Chic2
Zfand2a
Zbtb40
Nlk
Spns2
Edrf1
Psmb3
Pcgf2
Septin9
Mtus1
Zdhhc5
Gm33887
Ube2d3
Ndst1
Sparcl1
Hspa4
Alg14
Actr3
Aff1
Tmed4
Ddx56
Mrpl1
C1d
Prrt1
Ppt2
Kpnb1
Hnrnpa2b1
Cbx3
Mvk
Mmab
Cd9
Gramd2
Rsph3a
Ablim1
Col6a1
Fer
Ttyh2
Rpl38
Knl1
Zbtb4
Slc35g3
Polr2a
Gpr84
Eef2
Mtch2
Ints10
Fam53b
Folr2
Uqcrq
Leap2
Gdf9
Pou2af1
Cd109
Adgra3
Mrpl30
Mitd1
Ngdn
Samd4b
Malt1
Gmfg
Arf2
Usp20
BC005624
Pmaip1
Hip1r
Rac1
Klhl22
Wdr36
Rabggta
Nedd4
Ss18l1
Psma7
Rab40c
Mrpl44
Zfp648
Tedc1
Slc25a42
Bbs2
Sh3glb2
Miga2
Tpt1
Eea1
Uvssa
Cgref1
Abhd1
Slc36a4
Sh3bp1
Glo1
Tnrc18
Mfsd13b
Cdr2
Fry
Palb2
Dctn5
Nectin3
Kif13b
Frmd4b
3110082I17Rik
Rps28
Dffb
Cep104
Adssl1
Zfp629
Hbp1
Flot2
Dhrs13
Fyn
Lars
Sncg
Mmrn2
Akap11
Dcps
Klk9
Klk8
Mall
Cnot3
Zfp574
Ttc41
Hsp90b1
Grik5
Fem1b
Naif1
Stt3a
Ssrp1
P2rx3
Trak1
Mmp15
Tnfsf10
Sh3pxd2a
Oaf
Nudt18
Ifi30
Tfg
Zfp277
Dock4
Wasf2
Sgms2
Ist1
Rps19
Zfp692
Tut1
Tmbim6
Fau
Sema4b
Rraga
Aacs
Fcgr3
Sppl2a
Chchd2
Nfatc1
Emp1
Myo10
Immp1l
Elp4
Crtc1
Plekhg1
Myo6
Tbck
Aimp1
Phlda1
Nvl
Cnih4