ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035119 | Embryonic nose
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◣ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Gnai2
Phrf1
Rnf44
Cdhr2
Tjp3
Pip5k1c
Atg12
Ap3s1
Fam53c
Cdc25c
Sp2
Cmc2
Cenpn
Arrdc4
Ndufb1
Cpsf2
Septin11
Taf15
Mmp28
Rita1
Ddx54
Lrpprc
Tigd5
Eef1d
Iqch
Aagab
Cnot6
Tardbp
Calml3
Rtn3
Arntl
Slc14a2
Cln8
Smim4
Nt5dc2
Hdac2
Shc1
Lenep
Flad1
Cks1b
T2
Flcn
Psip1
Rfx1
Prkdc
Mcm4
Arid4a
Myh14
Tst
Mpst
Asah1
Tmem260
Col6a3
Eed
Smc3
Cenpp
Galnt10
Calm3
Sod2
Fus
Osbp
Git2
Ankrd13a
Ptcd2
Mrps27
Bhlhe40
Sec14l1
Uchl3
Abhd2
Tmem129
Tacc3
Slbp
Col16a1
Sash1
Hyal2
Hyal1
Tusc2
Ska2
Prr11
Rpgrip1
Hnrnpc
Atrnl1
Ptov1
Prkci
Tada3
Arpc4
Caskin1
Pgp
Mlst8
Bricd5
Dut
Gipc1
Cdiptos
Cdipt
Aldh4a1
Rpl22
Rnf207
Ankrd54
Pkia
Smim24
Gm48552
Fzr1
Dohh
Slc1a1
Ppm1l
Zfp469
Nphp4
Kcnab2
Rab5b
Pmel
Cdk2
Idh3b
Ptdss1
Mterf3
Eif2ak3
Cenpu
Sharpin
Maf1
Gm35339
Cyc1
Pik3r3
Igsf8
Atp1a2
Prdm10
Gm7244
Ttll7
Ptcd3
Polr1a
Rpn2
Mroh8
Ephb2
Ndst2
Por
Akirin1
Ift27
Rbm25
Rmnd5a
Wdr45
Tepsin
Ndufaf8
Cwc27
Zxdc
Tnnc2
Ube2c
Smim41
Atg101
Uros
Bccip
Fbxo33
Spty2d1
Pknox1
Dnmt1
Sgms1
Selenow
Uqcrh
Lrrc41
Bzw1
G3bp1
Atox1
Noct
Diaph1
Rab11fip4
Uqcc2
Robo1
Rnf5
Agpat1
Ager
Madd
Zfp219
Tmem253
Tmem218
Fkbp3
Fancm
Paxip1
Prox2
Dlst
Taf6
Mblac1
Cnpy4
Srbd1
Rnasek
0610010K14Rik
Was
Ppp1r13l
Cd3eap
Arhgef1
Cd79a
Rel
Cnot1
Slc25a41
Khsrp
Slc36a4
Trappc3
Map7d1
Them6
Slurp1
Psca
Nlk
Baz2a
Atp5b
Dpp9
Cspp1
Cops5
Adgrv1
Ankhd1
Cul2
Sp1
Hmox2
Nmral1
Ttll10
Cenpe
Trip10
Gpr108
Tcerg1
Mrpl21
Ighmbp2
Mapk8ip1
1700029I15Rik
Gstm5
Fam227a
Cby1
Wasf1
Cdc40
H2-DMa
Brd2
Dync1h1
Trpm4
Hrc
Top2a
Med23
Gm5165
Tcp11l2
Nt5c3
Mia2
Mtss2
Ccser2
Rab11b
Zfp869
Rpl27
Ifi35
Oxr1
Cltc
Tom1
Nfatc2ip
Rab21
Fam204a
Arhgap19
Mis12
Derl2
Med1
Cdk12
Ccdc85c
Slc39a3
Ap2m1
Ly6g6f
Abhd16a
Slc35e2
Sh3kbp1
Rbbp6
Ss18
Nudt2
Kif24
Cd164
Eif3b
Bcl6
Mat2a
Wwox
Armc1
Greb1
Kctd2
Atp5h
Id1
Jun
Myl12a
Raly
Palb2
Dctn5
Myadm
Frat1
Gnb2
Dnm2
Parpbp
Nup37
Kpna1
Per2
Dgat2
Txndc11
Frat2
Glo1
Klhl26
Tmem59l
Bzw2
Ankmy2
Frmd4a
Cytl1
Cdca7l
Paip2b
Oacyl
Smim14
Zfp821
Cyth1
Ist1
Rin2
Srgap2
Fam72a
Nufip1
Gpalpp1
Qrich1
Qars
Macrod1
Zfp24
Prkaca
Ube2b
Cdkl3
Fsbp
Aacs
Cic
Tcp11
Mllt11
Cdc42se1
Fgd4
Tbc1d17
Pnkp
Akt1s1
Ttc41
Hsp90b1
Tmem145
Prr19
Pafah1b3
Cdca8
9930104L06Rik
Rhbdd3
Ewsr1
Sigmar1
Arid3c
Trhr2
3110082I17Rik
Fbxo24
Lrch4
Uba1
Syn1
Dhx32
Wasl
Smoc1
Akt2
Ahnak
Utp18
Mbtd1
Trappc6b
Pnn
Il34
Jpt2
Mfsd8
Immp1l
Elp4
Gatad2a
Stt3a
Tmem9b
Hars
Hars2
Dhrs3
Kmt5c
Rnf26
C1qtnf5
Glrx5
Rlbp1
Fanci
Kdm4b
Zfp143
Katnb1
Stip1
Lsg1
Evi5l
Wasf2
Gas7
Tbck
Aimp1
Ubl5
Pin1
Fbxl12
Nup54
Mrpl44
Pfdn4
BC005537
Fchsd2
Sh2d5
Psmb3
Pcgf2
Pan2
Il23a
Tnrc6b
Pou2af1
Gm51425
Fcgr3
Mvk
Mmab
Trpv4
Cct8
Cnot3
Abhd18
1700034I23Rik
Nkx2-6
Mrpl30
Mitd1
Pitx3
Gbf1
Pdk2
Tmed4
Ddx56
Hexim2
Mtmr14
Traf2
Nuf2
Myh10
Mdfi
Mtch2
Zcchc14
Polg
Tctn2
Wdr77
Atp5pb
Wdr36
Tuba1b
Atg16l2
Hipk2
Slc14a1
Axl
Mrps31
Lars
Srxn1
Hbp1
Myh9
Cfap298
E030030I06Rik
Luc7l2
Slc23a4
Hnrnpa2b1
Cbx3
Zfp654
Cggbp1
Rab40c
Kdm4a
Prrt1
Ppt2
Slc43a3
Lemd1
Fbh1
Ankrd16
Zfp386
Spns2
Mrpl1
Dcps
Zfp961
Clca3a2
Zfp687
Actr3
Smim17
Dmxl1
Gm6712
Prpf40a
Arl6ip6
Arih2
Slc25a20
Cyth2
Kcnj14
Prnp
Prn
Frmd6
Arl2
Cul1
Sphk2
Spaca4
Rpl18
Fam83e
Canx
Rbm39
Tmem94
Ngdn
Klhl21
Spata17
Gpatch2
Zswim4
Ube2j2
Copz1
Meltf
Spring1
Rnft2
Fyn
Wdr25
Wars
Aig1
Tedc1
Crip1
Znhit1
Plod3
Ttc14
Lrriq3
Fpgt
Sstr3
C1qtnf6
Tle3
Wdr27
1600012H06Rik
Wdr81
Tlcd2
Tex14
Kpnb1
Oaf
Camta1
Timm17b
Pqbp1
Zfyve21
Xrcc3
Tut1
Hdac1
Cgref1
Abhd1
Proser1
Nhlrc3
Nfic
Rpl19
Cacnb1
Ap2a1
Mrps23
Itgb4
Ss18l1
Psma7
Calm1
Tdrkh
Cstf2t
Srp19
Ift140
Cramp1l
Snrnp200
1810024B03Rik
Knl1
Opa1
Nucb2
Uvssa
Fut10
Dcp1a
Med30
Scamp1
Rusc2
Sema3b
Utp3
Tmcc3
Dnajc16
Casp9
Tube1
Fam229b
Trib1
Isy1
Sel1l
Anapc5
Flywch1
Pex3
Adat2
Ilf2
Rab28
Npr1
F13a1
Slc33a1
Opa3
Mettl25
Ccdc59
Pip4k2b
Ubald1
Mgrn1
Chordc1
Kat6b
Ddost
Gstp2
Gstp1
Kansl2
Pcyox1l
Lnpep
Extl1
Nap1l4
Styxl1
Mdh2
Zbtb3
Polr2g
Tfcp2
Hexa
Ier5l
Dap3
Hip1r
Anp32e
Mphosph10
Mcee
Rab33b
Tom1l2
Drc3
Clasp2
Got1
Spdl1
Pip4p1
Osgep
Apex1
Mocs3
Dpm1
Zfp748
Txnip
Ergic1
Nol6
Denr
Tspan4
Polr2l
Cd151
Sdc4
Ube2a
C330007P06Rik
Fam20b
Kctd9
Cdca2
Acaa1b
Hspa12a
Mtf2
Ap1g1
Pramel32
Ifna13
Tnfrsf18
Meis1
Zfp101
Grin2c
Fdxr
Lancl2
Mcm3
Bms1
Npc2
Isca2
Grk5
Cnot10
Trappc9
Klhdc10
Sirt4
Gtpbp3
Ano8
Cnot11
Trir
Get3
Nbr1
Brca1
Rrp15
Zbtb40
Gnas
Olfr806
Haspin
Sec1
Dbp
Car11
Slc29a1
Mymx
Ctnnd1
Btbd18
Syt7
Sgms2
Tbl1x
Lig4
Abhd13
Tubb4b
Slc34a3
Fam166a
Fosl1
Ccdc85b
Stpg3
C1d
Zfp526
Dedd2
Gm33887
Pakap
Ppp6r3
Psmb2
Gprc5b
Rps6ka5
Get1
Dok3
Ddx41
Rac1
Nedd4
Galk2
Cops2
Hnrnpr
Ints10
Mthfd1l
Hsd17b12
Rbm27
Aff1
Nlrp10
Eif3f
Pabpn1
Ufsp2
1700029J07Rik
Ssbp1
Zfp180
Zfp574
Grik5
Dhx33
Nudcd2
Hmmr
Uchl1
Ints4
Fam149b
Ecd
Cln6
Hinfp
Smim12
Hexb
Rassf7
Lmntd2
Hnrnph2
Gla
Smim38
Znrd1as
Znrd1
Ppp1r11
Serpinh1
Leng8
Ndufb3
Fam126b
Msmo1
Sh3glb2
Miga2
Timm22
Nxn
Mtfp1
Krr1
Ciart
BC028528
Tob2
Bmp5
Qtrt2
Ccdc191
Adnp
Trip4
Pclaf
Ift22
Chchd2
Wdfy2
Mthfd2
Mob1a
Drg2
Zbed5
Rab17
Dcaf7
Cttnbp2nl
4930564D02Rik
Stat3
Tmem101
Zbtb5
Polr1e
Erp27
Elk3
Col2a1
Gpaa1
Exosc4
Retsat
Elmod3
Mfsd13b
Cdr2
Zfp513
Snx17
Eif2b4
Gpn3
Fam216a
Trim45
Esyt2
Srsf1
Atp6v0c
Amdhd2
AW549877
Ccdc88a
Cnot8
Gatad2b
Tgfbi
Ube2f
Ubiad1
Mtor
Tmem107
Gjc3
Nvl
Cnih4
Rpp38
Acbd7
B3gntl1
Clic4
Anln
9530077C05Rik
Fdft1
Xab2
Stxbp2
Pet100
Pcp2
Chd6
Sptlc2
Mtg1
Sugct
Mplkip
Zdhhc5
Smim22
Rogdi
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Sgk3
Tmx2
Med19
Nr1h3
Acp2
Selenoh
Ensa
Yars
S100pbp
Spink2
Zbtb4
Slc35g3
Polr2a
Tfg
Traf7
Rab26
Ccdc89
Lamp1
Zfp668
Zfp646
Rpa2
Cluap1
1700037C18Rik
Cst6
Catsper1
Tcf3
Synj2
Hnrnpl
Etv5
Plekhb1
Kansl3
Fer1l5
Ap3s2
Recql
Golt1b
Nme1
Pum3
Zfp560
Mre11a
Ankrd49
Dffb
Cep104
Postn
Rpl26
Rtraf
Ddx19b
Aars
Angpt2
Yipf2
Timm29
Tspyl1
Tcam1
Smarcd2
Nfib
Rab4b
Mia
Tmem198b
Dnajc14
Atp5g1
Chic2
Tm7sf2
Zfpl1
Vps51
Tmem262
Cdca5
Bcas3
Herc2
Kifbp
Aspn
Smarcal1
Tulp4
Nop14
Grk4
Faap24
Htra2
Aup1
Dqx1
Fam76b
Cep57
Ubald2
Ripk3
Adcy4
Tomm40
Polr3b
Me1
Snrpc
Klhl20
Ap3m2
Snx22
Zfp119b
Yju2
Ebi3
Znhit3
Mrpl39
Mxd1
Smg8
Rasgef1c
Zdhhc24
Actn3
Cipc
Slc9b2
Ube2s
Cct5
Atpsckmt
Kifap3
Trp53rkb
Ogfod1
Nudt21
Atf7
Zfp691
Ndufs7
Zfp472
Ggct
Pigm
Eipr1
Fem1b
Sacm1l
Tma16
Orai3
Setd1a
Nasp
Alkbh3
Cox7a2l
Rrbp1
Atp2c2
P4hb
Arhgdia
Cacybp
Stat1
Ift46
Arcn1
Trp53rka
Psph
Cct6a
Usp22
Ablim1
St6galnac6
Mlf2
Drosha
6030458C11Rik
Wdr92
Pno1
Ticrr
Lama4
Zswim3
Acot8
Cyp2u1
Gid8
Dido1
Il31ra
Rheb
Zfp648
Fos
Akap8l
Atp8a1
Emp1
Septin7
Map3k3
Cfap20
Uvrag
Mcoln3
Ercc6l2
Kifc5b
Taco1
Lima1
Syce1l
Mon1b
Sf3b2
Gal3st3
Slc25a25
Naif1
Dcun1d4
Calcoco1
Gabpb2
Myl12b
Cebpa
Ppip5k2
Gin1
Smg9
Ptrhd1
Cenpo
Pitpnm1
Cdk2ap2
Dad1
Abhd4
Ncam1
Dnajb5
Creb5
Nsfl1c
Cnpy3
Dab2ip
Ttc39d