ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104231 | Limbs and tails
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◣ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

T2
Rab11fip4
Cldn34d
Hexb
Kpna1
Greb1
Nfe2
Myh14
Vmn2r102
Txndc11
Fgd4
Fbp2
Frmd4a
Apobec2
Clasp2
Foxp2
Il31ra
Ier2
Cdc42ep4
Sec23b
Rbbp9
Wwox
Bhlhe40
Kctd14
Padi2
Bmp5
Olfr806
Limch1
E030030I06Rik
Sema4d
Mindy4
Col16a1
Rarg
Fbxw4
Arhgef3
Oat
Lrrc75b
Ggt1
Otogl
Aadacl2fm1
Abhd6
Fgfrl1
Slc14a2
Slc44a3
Gstm5
Abtb2
Calr4
Smg9
Rai1
Psma8
Tmem211
Zfp637
Gm17660
Ccser2
Vgll4
Nol11
Extl1
Gpsm2
Smim38
Rnf38
Med4
Nkx2-6
Bsdc1
Nt5c2
Mtf2
Inpp4a
Atp5g1
Rlbp1
Fanci
2900026A02Rik
Ccdc69
Prrg4
Cap1
Sympk
Ncaph
Itpripl1
Foxa3
Lep
Rfk
Ap2m1
Sspn
Mbnl2
Sema3b
Kcnj16
Pramel32
Ifna13
Col9a3
Cpa5
Cyth1
Gm10710
Dchs2
Kras
H2-DMa
Brd2
Ttc30a1
Olfm1
Amotl2
Cd209a
Rab4b
Mia
Plod2
Tecpr1
Setd4
Cbr1
Ap3m2
Cnot2
Efhd2
Marcksl1
Oasl1
Rgs8
Rusc2
Irf2bp2
Cttnbp2nl
4930564D02Rik
Csf2ra
Cer1
9430038I01Rik
Acvr1b
Aldh9a1
Mfsd8
Rgs3
Sox8
Lmf1
Arhgef17
Papss2
Sec14l1
Eipr1
Ptpn14
Mycbpap
Gfpt1
Pgpep1
Arhgef1
Rsph3b
Col6a6
Sphk1
Unc13c
Dab2ip
Rbfox2
Phc2
Nhsl1
Bcl9l
Zbtb18
Tle3
Mical1
St3gal4
Etv5
Duxbl3
Duxbl2
Duxbl1
Cdh12
Ror2
Tmem125
Mtss2
Stap2
Mpnd
Slc26a1
Sorbs2
Cnn3
Dstyk
Arhgef19
Tox2
Ptk7
Prickle1
Fli1
Ak1
Angel1
Sv2b
Sox5
Gzmm
Bsg
Nuggc
Kcnn4
Acsbg1
Rara
Plekhf2
Fmnl2
Tmem18
Pygo2
Pbxip1
Abr
Pp2d1
Arsi
Fscn2
Actg1
Zfp469
Nfatc1
Lrrc8a
Ksr1
Col9a1
Ttll10
Fzd2
Chadl
Slc35a3
Myadm
Ccdc90b
Srxn1
Stat5b
Me1
Calcoco1
Ddx1
Zfp143
Dnah7b
Ppdpf
Ogfr
Cops9
H2-T24
Olfr1274
Mbnl1
Colgalt2
Cemip2
Calml3
Zfp24
Shc4
Mrc2
AI429214
Cerk
1700034J05Rik
Nedd4
Defb45
Defb19
Txnip
Ankfn1
Osbpl1a
Mtss1
Spire1
Cxxc5
Zfp791
Rcn1
Rtkn
Ptpre
Magi1
Wdr62
Zfp598
Npw
Clip3
Nynrin
F830045P16Rik
Pacs2
Uchl4
Col6a1
Cobll1
Rsph3a
Fscn1
Pabpc1l
Acsm3
Ss18l2
Nktr
Sec22c
Cbx5
Tns2
Crybg1
Slc35e3
Scx
Scamp2
Cntn1
Hoxa4
Slc27a1
Nxnl1
Pnmal2
Tnrc6b
Tedc1
Ankar
Ntng1
Cdhr4
Inka1
Uba7
Phldb1
Vangl2
Bambi
Cabcoco1
Snx22
Plekhb1
Tbc1d10a
Adcy5
Efnb3
Polr2e
Gpx4
Lama4
Rpl23a
Rab34
Proca1
Igsf8
Atp1a2
Matn3
Cracd
Veph1
Pcdh20
Ninj1
Tmem63a
Lekr1
Cep97
Nrip1
Clec2g
Gm525
Tspan8
Col8a2
Rpl27
Ifi35
Fxyd3
Tfg
Srpk2
Rrm1
Rab8a
Cdkal1
Il25
Efs
Cmtm5
Dusp11
Pbx2
Gpsm3
Ppp2r1a
Vwa3b
Nckap5
A930018P22Rik
Ncor2
Ets1
Pgp
Mlst8
Bricd5
Comp
Cxcl11
Slc2a1
Syt8
Prelp
Capn9
Agt
Tnrc18
Mcam
Cdk2ap1
Phox2b
Cd96
Mrpl36
Arhgef10l
Tent5b
Trnp1
Tgm2
Abca3
Abca17
Rnf44
Cdhr2
Tjp3
Pip5k1c
Iqch
Aagab
Phrf1
Denr
Cmc2
Cenpn
Prkdc
Mcm4
Cnot6
Mia2
Pknox1
Ptcd2
Mrps27
Fam53c
Cdc25c
Flcn
Jag2
Gipc1
Gnai2
Por
Rita1
Ddx54
Calm3
Kctd2
Atp5h
Taf15
Mmp28
Git2
Ankrd13a
Prox2
Tardbp
Dut
Akirin1
Cbr3
Lrpprc
Septin11
Wdr45
Atg12
Ap3s1
Tmem129
Tacc3
Slbp
Asah1
Prdm10
Tigd5
Eef1d
Ift27
Cln8
Sash1
Gm7244
Was
Dnmt1
Aldh4a1
Kmt2a
Ndufb1
Cpsf2
Cdiptos
Cdipt
Olfr855
Olfr854
Caskin1
Arntl
Ptov1
Uqcrh
Lrrc41
Madd
Prkci
Itgb4
Hyal2
Hyal1
Ptdss1
Mterf3
Ptcd3
Polr1a
Eif3b
Psip1
Rmnd5a
Dlst
Eed
Rpl22
Rnf207
Hdac2
Tmem260
Uchl3
Fus
Shc1
Lrrc56
Hras
Wasl
Ppm1l
Arid4a
Smim41
Rtn3
Atg101
Arrdc4
Cenpe
Tada3
Arpc4
Ccdc85c
Cox8c
Ndst2
Tusc2
Sp2
Cenpp
Nphp4
Noct
Kcnab2
Sod2
Rpn2
Mroh8
Smim24
Gm48552
Fzr1
Dohh
Ly6g6f
Abhd16a
Tst
Mpst
Atrnl1
Zfp949
Cd164
Galnt10
Fbxo33
Gnb2
Trappc3
Map7d1
Diaph1
Polg
BC005537
Ajuba
Qrich1
Qars
Lenep
Flad1
Cks1b
Dhrs3
Pik3r3
Acacb
Med1
Cdk12
Ss18
Raly
Znhit1
Plod3
Lsg1
Baz2a
Slc1a1
Uros
Bccip
Junb
Bcl6
Rpl19
Cacnb1
Ppp1r13l
Cd3eap
Col6a3
Smc3
Wdr77
Atp5pb
Myl12a
Dgat2
1700016H13Rik
Trir
Get3
Hook2
Pkia
Rps27l
Hmox2
Rps29
Lrr1
Sharpin
Maf1
Gm35339
Cyc1
Pfdn4
Mat2a
Top2a
Tcp11l2
Ankrd54
Fam227a
Cby1
Zfp219
Tmem253
Rhbdd3
Ube2b
Cdkl3
Eif2ak3
Fam20b
Cwc27
Ska2
Prr11
Arl2
Ephb2
Ewsr1
Dot1l
Rfx1
Nemf
Atp6v0c
Amdhd2
Phlda3
Dpp9
Bzw1
Paxip1
Cdca7l
Abhd2
Bzw2
Ankmy2
Rbm25
Rpgrip1
Hnrnpc
Taf6
Mblac1
Cnpy4
Niban2
Mylip
Mapk8ip1
1700029I15Rik
Id1
Per2
Ttll7
Cdt1
Aprt
Selenow
Nmral1
Rnasek
0610010K14Rik
Slc39a3
Tepsin
Ndufaf8
Pa2g4
Rnf5
Agpat1
Ager
Il34
Cnot1
Atp5b
Cenpu
Lfng
Cd79a
Smim4
Nt5dc2
Robo1
Evpl
Akt2
Trip10
Mtmr14
Gpr108
Fbxl14
Tmem218
Cic
Nt5c3
Ilf2
Idh3b
Srbd1
Fstl3
Tgfbi
Tbc1d17
Pnkp
Akt1s1
Dnm2
Rab5b
Pmel
Cdk2
Osbp
Tnnc2
Hipk2
Nudt2
Kif24
Zmynd8
Slc25a41
Khsrp
Mark3
Cul2
Slc35e2
Them6
Slurp1
Psca
Oacyl
Tmem145
Prr19
Pafah1b3
Tcerg1
Plekha1
Wasf1
Cdc40
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Sfi1
Ube2c
Tmem41b
Mdfi
Tjp2
Tom1
Dhx32
G3bp1
Atox1
Frat1
Trpm4
Hrc
Cytl1
Arhgef4
Prss57
Oxr1
Cspp1
Cops5
Kremen1
Traf2
Iqsec1
Eif4enif1
Zscan25
Frat2
Nfib
Zfp821
Pip4k2b
Gjc3
Zfp869
Mrpl21
Ighmbp2
Trhr2
Sigmar1
Arid3c
Uqcc2
Slc14a1
Dst
Sh2d5
Paip2b
Aig1
Inip
Fam149b
Ecd
Tmem250-ps
Prpf40a
Arl6ip6
Tcp11
Rin2
Lemd1
Erp27
Ahnak
Plekhh2
Fam110b
Espn
Atg16l2
Rbbp6
Nfatc2ip
Sp1
Fkbp3
Fancm
Mrps11
Mrpl46
Tspan4
Polr2l
Cd151
Sstr3
C1qtnf6
Camta1
Ubald1
Mgrn1
Cltc
Sh3kbp1
Rab11b
Rbm39
Hal
Sgms1
Ankhd1
Fchsd2
Gas7
Sorbs1
Fbxo24
Ttc14
Styxl1
Mdh2
Msmo1
Susd6
Slc23a4
Rab21
Cst6
Bmp4
Hexim1
Spc25
G6pc2
Med23
Rab17
Col2a1
Prxl2b
Klk11
Klk10
Klhl21
Rab28
Kmt5c
Dap3
Ube2a
Rel
Dync1h1
Zcchc14
Abhd18
1700034I23Rik
Gm5165
Isy1
Clic4
Psmd5
Npr1
Rassf7
Lmntd2
Cct5
Atpsckmt
Lrch4
Nepn
Gopc
Gzmk
Uchl1
Spty2d1
Fam89a
Polr1b
Zswim4
Vwa1
Anln
9530077C05Rik
Marchf3
Mis12
Derl2
Slc30a5
Mpl
Tex14
Utp18
Mbtd1
Eif4a3
Card14
Cwc22
Gstp2
Gstp1
Nol6
Arhgap19
C330007P06Rik
Prkaca
Meis1
Uba1
Nacc2
Catsper1
Frmd6
Trim7
Trim41
Sirt4
Jun
Stip1
Serpinb5
Olfml2a
Nr6a1
Srgap2
Fam72a
Poldip3
Fbxo9
Cilk1
Smim17
Wdr27
1600012H06Rik
Trpv4
Smoc1
Trib1
Limk2
Tarbp1
Zfp687
Aph1b
Katnb1
Fam227b
Dtwd1
Zfp945
Tuba1b
Smg8
Mdm2
Mllt11
Cdc42se1
Tctn2
Smarcal1
Glrx5
Slc25a25
Zfp383
Zfp27
Map4k4
Tacc1
Proser1
Nhlrc3
Gli2
Wdr92
Pno1
Hexa
Acaa1b
Ireb2
Letm1
Mrps31
Sgk3
Unc13d
Axl
Zfp526
Dedd2
Cdca8
9930104L06Rik
Col9a2
Atf7
Fam83b
Spink2
Tmem94
Sdc4
Zfyve21
Xrcc3
Hdac1
Atp8a1
Zfp386
Myl12b
Mansc1
Ttf1
Cfap77
Ubl5
Pin1
Fbxl12
Glce
Wnt10b
Fam204a
Haspin
Tmem198b
Med30
Dnajc14
Pan2
Il23a
Sec1
Dbp
Car11
Slc26a8
Mapk14
Car5a
Banp
Evi5l
Cutal
Slc29a1
Mymx
Gm51425
Fam3c
Ergic1
Rasip1
Izumo1
Gm5591
Zfp385b
Micall1
Stat3
Adnp
Hexim2
Copz1
Ltbp4
Zfp748
Parpbp
Nup37
Meltf
Cebpg
Whrn
Armc1
Kdm4a
Zfp532
Xpc
Utp3
Lsm3
Id2
Ercc2
Zxdc
Cct8
Ulk1
Chic2
Zfand2a
Zbtb40
Nlk
Spns2
Edrf1
Psmb3
Pcgf2
Septin9
Mtus1
Zdhhc5
Gm33887
Ube2d3
Ndst1
Sparcl1
Hspa4
Alg14
Actr3
Aff1
Tmed4
Ddx56
Mrpl1
C1d
Prrt1
Ppt2
Kpnb1
Hnrnpa2b1
Cbx3
Mvk
Mmab
Cd9
Gramd2
Ablim1
Fer
Ttyh2
Rpl38
Knl1
Zbtb4
Slc35g3
Polr2a
Gpr84
Eef2
Mtch2
Ints10
Fam53b
Folr2
Uqcrq
Leap2
Gdf9
Pou2af1
Cd109
Adgra3
Mrpl30
Mitd1
Ngdn
Samd4b
Malt1
Gmfg
Arf2
Usp20
BC005624
Pmaip1
Hip1r
Rac1
Klhl22
Wdr36
Rabggta
Ss18l1
Psma7
Rab40c
Mrpl44
Zfp648
Slc25a42
Bbs2
Sh3glb2
Miga2
Tpt1
Eea1
Uvssa
Cgref1
Abhd1
Slc36a4
Sh3bp1
Glo1
Mfsd13b
Cdr2
Fry
Palb2
Dctn5
Nectin3