ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4554102 | 3T3-L1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◣ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Cldn34d
Kmt2a
E030030I06Rik
Slc39a10
Txndc11
Nup107
Denr
Tmem18
Dagla
Hnrnpa2b1
Cbx3
Haspin
Cenpu
Abca3
Abca17
Ddx17
Lyz2
Aldh18a1
Wwox
Rnf44
Cdhr2
Gpr137
Bad
Kcnk4
Baz2a
Cwc22
Speer4e
Zfp668
Zfp646
Snx12
Hgsnat
Qrich1
Qars
Tmem125
Kansl3
Fer1l5
Med1
Cdk12
Ints10
Psmd5
Slc25a25
Cutal
Naif1
Arl4d
Zfp523
Styxl1
Mdh2
Vmn1r2
Vmn1r3
Fut10
Smim41
Atg101
Eapp
Polq
Afg3l1
Ube2d3
Cipc
Rbm39
Tex14
Ncbp3
Eps15
Spdl1
Cyb561d1
Atxn7l2
Bzw1
Adgrl1
Gm51573
Mettl18
BC055324
Eif4a3
Card14
Slc26a8
Mapk14
Speer4d
Pradc1
Cct7
Stxbp4
Cox11
Zfp41
Nudt3
Arl14ep
Wdr77
Atp5pb
Poldip3
Arf3
Coq9
Ciapin1
Fbxw4
Septin7
Rps19
Ube2z
Tcam1
Smarcd2
Zzz3
Ube2i
Speer4f1
AW549877
Dux
Gm4981
Prpsap1
Hjurp
A730008H23Rik
Epc2
Lamp1
Tab1
Rhoc
H3c15
H3c14
H2ac19
H2ac18
Rnf115
Polr3c
Capn15
Pcbp2
Gm9758
Mthfd2
Mob1a
Dnajb4
Fubp1
Tmed9
B4galt7
Gpx8
Kif2c
Rad1
Brix1
Gins3
Trim7
Trim41
Hspa4
Slc25a10
Mrpl12
Mdm2
Gm21190
Arhgef1
Cd79a
Proser1
Nhlrc3
Dffb
Cep104
Gins2
Zfp142
Bcs1l
Mrnip
Hdgf
Yipf4
Fam53c
Cdc25c
Sirt4
Slc39a4
Gm10354
Cpsf1
4931408C20Rik
Znrd1as
Znrd1
Ppp1r11
Nfkbiz
Mtf2
Glce
Ift46
Arcn1
Vps36
Ckap2
Cpsf6
Pfdn5
Myg1
Mcph1
Ireb2
Cct8
Gm3448
Gm3417
Tcte3
Ermard
Ska2
Prr11
Atf7
Ptcd2
Mrps27
Ect2
Slc25a4
Tardbp
Smarcd1
Nudt1
Asic1
Drd3
Cops4
Banf1
Eif1ad
Adgrf2
Usp3
Tfb2m
Cnst
Mrpl21
Ighmbp2
Ahctf1
Cnot8
Ttc39d
Cox7a2
Nsun3
Insr
Atf2
Rpl7l1
2310039H08Rik
Prdm10
Gm7244
Washc1
Ndufv2
Xpc
Lsm3
Ttc14
Dnajc7
Nkiras2
Tmem107
Exosc6
Smc2
Hps6
Armh3
Slc35e3
Pfkfb2
Yod1
Rps28
Ppil1
BC004004
Sgms1
Ncbp2
0610012G03Rik
Kazald1
Dck
Ssbp2
Lyz1
Flcn
Sfi1
Eif4enif1
Ddx20
Slc39a9
Erh
Dicer1
Tomm22
Eif4g2
Mak16
Tbpl1
Mettl1
Eef1akmt3
Cyp27b1
Ddhd2
Taf12
Gmeb1
Gm13290
Gm13289
Gm13285
Gm13279
Gm13278
Gm13275
Ifnz
Gm13272
Gm13277
Gm13276
Myef2
Cdkn2aipnl
Arid1a
Gm17019
Cmc2
Cenpn
Rraga
Rubcn
Creld2
Alg12
Fyttd1
Rbm25
Rab33b
Gtse1
Zbtb4
Slc35g3
Polr2a
Rap2b
Phf23
Gabarap
Dvl2
Rfwd3
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Ppm1l
Srp68
Galr2
Rpn2
Mroh8
Pdia5
Ssrp1
P2rx3
Ankrd17
Smim10l1
Lrpprc
Wdr27
1600012H06Rik
Txnip
Ankfy1
Stat1
Spring1
Rnft2
Lsm5
Anxa6
C1qbp
Myl12a
Ddx42
Ccdc47
D16Ertd472e
Calm3
Smg8
Gtf3c6
Brpf1
Nup35
Kif20b
Rgl2
Tapbp
Tut7
Sod2
Ints13
Fgfr1op2
Kdsr
Micu3
Dbr1
Armc8
Ndufa5
Asb15
Akr1b3
Tigd5
Eef1d
Zcchc4
H2aj
H4f16
Zfp113
Cops6
Ska3
Mrpl57
Pxmp2
Pole
Fam133b
Gga1
Scamp1
Gfm1
H2bc6
H1f4
Wdr90
Mcrip2
Tln1
Creb3
Fbxl14
Greb1
Nkx2-6
Kpna1
T2
Hexb
Il31ra
Tjp3
Pip5k1c
Olfr806
Iqch
Aagab
Phrf1
Abhd6
Rab11fip4
Prkdc
Mcm4
Cnot6
Mia2
Pknox1
Jag2
Gipc1
Gnai2
Por
Rita1
Ddx54
Kctd2
Atp5h
Taf15
Mmp28
Git2
Ankrd13a
Myh14
Prox2
Dut
Akirin1
Cbr3
Septin11
Wdr45
Atg12
Ap3s1
Tmem129
Tacc3
Slbp
Asah1
Ift27
Cln8
Sash1
Slc14a2
Was
Sspn
Dnmt1
Vmn2r102
Aldh4a1
Ndufb1
Cpsf2
Cdiptos
Cdipt
Col16a1
Olfr855
Olfr854
Caskin1
Arntl
Ptov1
Uqcrh
Lrrc41
Aldh9a1
Madd
Prkci
Itgb4
Hyal2
Hyal1
Ptdss1
Mterf3
Ptcd3
Polr1a
Eif3b
Psip1
Bhlhe40
Rmnd5a
Sec14l1
Dlst
Eed
Rpl22
Rnf207
Pgp
Mlst8
Bricd5
Hdac2
Tmem260
Uchl3
Fus
Shc1
Lrrc56
Hras
Wasl
Arid4a
Tecpr1
Rtn3
Arrdc4
Cenpe
Tada3
Arpc4
Ccdc85c
Cox8c
Ndst2
Tusc2
Sp2
Cenpp
Nphp4
Noct
Kcnab2
Smim24
Gm48552
Fzr1
Dohh
Cdhr4
Rlbp1
Fanci
Ly6g6f
Calml3
Abhd16a
Tst
Mpst
Fgd4
Atrnl1
Zfp949
Srxn1
Igsf8
Cd164
Galnt10
Gstm5
Fbxo33
Gnb2
Atp1a2
Trappc3
Map7d1
Diaph1
Polg
BC005537
2900026A02Rik
Ajuba
Cerk
Inka1
Lenep
Flad1
Cks1b
Aadacl2fm1
Dhrs3
Pik3r3
Acacb
Ttll10
H2-DMa
Brd2
Ss18
Raly
Znhit1
Plod3
Lsg1
Slc1a1
Uros
Bccip
Osbpl1a
Frmd4a
Junb
Bcl6
Rpl19
Cacnb1
Ppp1r13l
Cd3eap
Col6a3
Smc3
Dgat2
1700016H13Rik
Zfp469
Trir
Get3
Hook2
Ap2m1
Pkia
Rps27l
Hmox2
Rps29
Lrr1
Sharpin
Maf1
Gm35339
Cyc1
Pfdn4
Mat2a
Top2a
Tcp11l2
Ankrd54
Mtss2
Fam227a
Cby1
Zfp219
Tmem253
Uba7
Rhbdd3
Setd4
Cbr1
Cd209a
Ube2b
Cdkl3
Eif2ak3
Fam20b
Cwc27
Arl2
Col6a6
Ephb2
Ewsr1
Dot1l
Rfx1
Nemf
Atp6v0c
Amdhd2
Phlda3
Dpp9
Myadm
Paxip1
Cdca7l
Abhd2
Bzw2
Ankmy2
Rpgrip1
Hnrnpc
Taf6
Mblac1
Cnpy4
Amotl2
Ccser2
Niban2
Mylip
Mapk8ip1
1700029I15Rik
Id1
Per2
Ttll7
Cdt1
Aprt
Selenow
Nmral1
Rnasek
0610010K14Rik
Olfr1274
Slc39a3
Tepsin
Ndufaf8
Pa2g4
Rnf5
Agpat1
Ager
Etv5
Il34
Gm17660
Cnot1
Rusc2
Atp5b
Lfng
Apobec2
Smim4
Nt5dc2
Crybg1
Smg9
Pramel32
Ifna13
Dab2ip
Robo1
Evpl
Akt2
Trip10
Mtmr14
Gpr108
Tmem218
Cic
Nt5c3
Rarg
Ilf2
Sema3b
Idh3b
Srbd1
Fstl3
Sec23b
Rbbp9
Dnah7b
Tgfbi
Tbc1d17
Pnkp
Akt1s1
Dnm2
Rab5b
Pmel
Cdk2
Osbp
Tnnc2
Rpl27
Ifi35
Hipk2
Nudt2
Kif24
Zmynd8
Slc25a41
Khsrp
Mark3
Cul2
Slc35e2
Them6
Slurp1
Psca
Oacyl
Tmem145
Prr19
Pafah1b3
Tcerg1
Plekha1
Wasf1
Cdc40
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Ube2c
Ss18l2
Nktr
Tmem41b
Kctd14
Mdfi
Tjp2
Tom1
Dhx32
G3bp1
Atox1
Frat1
Trpm4
Hrc
Cytl1
Bmp5
Arhgef4
Prss57
Oxr1
Cspp1
Cops5
Rsph3b
Mfsd8
Kremen1
Zfp24
Gm525
Traf2
Iqsec1
Arhgef3
Irf2bp2
Zscan25
Atp5g1
Frat2
Nfib
Oasl1
Zfp821
Zfp143
Pip4k2b
Gjc3
Zfp869
Trhr2
Sigmar1
Arid3c
Uqcc2
Extl1
Slc14a1
Fgfrl1
Dst
Sh2d5
Rtkn
Paip2b
Aig1
Inip
Fam149b
Ecd
Tmem250-ps
Prpf40a
Arl6ip6
Tcp11
Ier2
Tnrc6b
Rin2
Lemd1
Erp27
Ahnak
Plekhh2
Fam110b
Espn
Atg16l2
Rbbp6
Nfatc2ip
Sp1
Fkbp3
Fancm
Nfe2
Mrps11
Mrpl46
Tspan4
Polr2l
Cd151
Sstr3
Smim38
C1qtnf6
Limch1
Camta1
Ubald1
Mgrn1
Cltc
Sh3kbp1
Rab11b
Hal
Otogl
Ankhd1
Fxyd3
Fchsd2
Gas7
Sorbs1
Fbxo24
Msmo1
Susd6
Slc23a4
Rab21
Bcl9l
Cst6
Ap3m2
Bmp4
Hexim1
Spc25
G6pc2
Med23
Rab17
Col2a1
Prxl2b
Klk11
Klk10
Clasp2
Klhl21
Rab28
Kmt5c
Dap3
Bsdc1
Ube2a
Rel
Dync1h1
Zcchc14
Abhd18
1700034I23Rik
Gm5165
Isy1
Clic4
Npr1
Rassf7
Lmntd2
Cct5
Atpsckmt
Lrch4
Nepn
Gopc
Sec22c
Rgs3
Gzmk
Uchl1
Cttnbp2nl
4930564D02Rik
Spty2d1
Fam89a
Spire1
Polr1b
Zswim4
Vwa1
Snx22
Anln
9530077C05Rik
Marchf3
Mis12
Derl2
Slc30a5
Mpl
Utp18
Mbtd1
Olfm1
Gstp2
Gstp1
Nol6
Arhgap19
Tle3
C330007P06Rik
Prkaca
Meis1
Uba1
Matn3
Plekhb1
Nacc2
Catsper1
Frmd6
Jun
1700034J05Rik
Stip1
Serpinb5
Olfml2a
Nr6a1
Srgap2
Fam72a
Fbxo9
Cobll1
Cilk1
Smim17
Trpv4
Smoc1
Trib1
Limk2
Tarbp1
Zfp687
Aph1b
Katnb1
Fam227b
Dtwd1
Zfp945
Tuba1b
Mllt11
Cdc42se1
Cdc42ep4
Tctn2
Smarcal1
Glrx5
Zfp383
Zfp27
Map4k4
Tacc1
Rab4b
Mia
Gli2
Wdr92
Pno1
Hexa
Acaa1b
Letm1
Mrps31
Me1
Sgk3
Unc13d
Axl
Zfp526
Dedd2
Col9a3
Cdca8
9930104L06Rik
Gm10710
Efhd2
Dchs2
Col9a2
Fam83b
Spink2
Tmem94
Sdc4
Cyth1
Mbnl2
Zfyve21
Xrcc3
Fbp2
Hdac1
Atp8a1
Zfp386
Myl12b
Mansc1
Ttf1
Cfap77
Ubl5
Pin1
Fbxl12
Wnt10b
Fam204a
Tmem198b
Med30
Dnajc14
Lama4
Pan2
Il23a
Sec1
Dbp
Car11
Car5a
Banp
Evi5l
Slc29a1
Mymx
Gm51425
Fam3c
Ergic1
Rasip1
Izumo1
Gm5591
Zfp385b
Micall1
Stat3
Adnp
Pcdh20
Hexim2
Copz1
Ltbp4
Zfp748
Parpbp
Nup37
Meltf
Cebpg
Whrn
Armc1
Vgll4
Kdm4a
Zfp532
Utp3
Shc4
Id2
Ercc2
Zxdc
Ulk1
Chic2
Zfand2a
Zbtb40
Nlk
Spns2
Edrf1
Psmb3
Pcgf2
Septin9
Mtus1
Zdhhc5
Gm33887
Arhgef19
Ndst1
Sparcl1
Alg14
Actr3
Aff1
Pygo2
Pbxip1
Tmed4
Ddx56
Mrpl1
C1d
Prrt1
Ppt2
Kpnb1
Abtb2
Sympk
Mvk
Mmab
Cd9