ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX450828 | Hair follicle stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◣ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Jag2
Rnf44
Cdhr2
1700016H13Rik
Lrrc56
Hras
Txndc11
2900026A02Rik
Fstl3
Prss57
Tecpr1
Cbr3
Spc25
G6pc2
Vmn2r102
Denr
Lfng
Rps27l
Tjp3
Pip5k1c
Arhgef4
Junb
Hook2
Plekha1
Tmem129
Tacc3
Slbp
Kremen1
Limk2
Prdm10
Gm7244
Cnot6
Tfap2a
Ptcd2
Mrps27
Qrich1
Qars
Id2
Fam20b
Dhrs3
Idh3b
Pa2g4
Iqch
Aagab
E030030I06Rik
Akirin1
Ajuba
Mtf2
Zscan25
Col7a1
Serpinb5
Mia2
Aph1b
Git2
Ankrd13a
Niban2
Gipc1
Kctd2
Atp5h
Vwa1
Mark4
Exoc3l2
Letm1
Slc30a5
Ulk1
Por
Evpl
Rhbdd3
Ewsr1
Cdhr4
Inka1
Uba7
Fbxo9
Cilk1
Cenpe
Fus
Plekhg6
Cd164
Prox2
Dlst
Myo6
Calm3
Fer
Wdr45
Polg
Tmem41b
Sncg
Mmrn2
Sh3bp1
Cmc2
Cenpn
Rita1
Ddx54
Raly
Taf15
Mmp28
Sema4b
Itgb4
Cic
Nfatc1
Dnmt1
Polr3g
Mblac2
Gli2
Hsf1
Bop1
Phlda3
Ccdc85c
Was
Prkdc
Mcm4
Reep4
Hr
Ttll10
Adnp
Susd6
Gnai2
Tardbp
Rnf14
Akt2
Dut
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Fbxw4
Mfsd4b4
Sspn
Zfp296
Gemin7
Rpn2
Mroh8
Dst
Ifi30
Pik3r2
Ube2d3
Castor1
Psip1
Btbd2
Shmt2
Ndufa4l2
Dsc3
Ptdss1
Mterf3
Rbbp6
Diaph1
Flcn
Styxl1
Mdh2
Serpinb10
Zmynd8
Fam83b
Zfp607b
Pmaip1
Sirt4
Septin11
Ndrg1
Acacb
Tpt1
Tipin
Ppm1l
Fam167a
Arl2
Cldn34d
Ndst1
Camsap3
Cd47
Vmn2r72
Sash1
Pard6g
Gnb2
Usp20
BC005624
Prkci
Wasl
Bcl9l
Xpc
Lsm3
Irf6
Itga2
Gna15
Noct
Ly6g6f
Abhd16a
Cenpp
Col6a6
Hsd11b2
Per2
Iffo2
Rnf38
Rgl2
Wdr46
Pfdn6
Cpped1
Bcl6
Ubr4
Ift27
Golim4
Tgfbi
Rgs12
Myl12a
Eea1
Kctd17
Smim24
Gm48552
Fzr1
Dohh
Ube2b
Cdkl3
Rbm39
Topors
Smim27
Ndufb6
Sema3b
Atg16l2
Eif5
Sgms1
Hdac2
Myl12b
Unk
H3f3b
Nrbp2
Aldh9a1
Zcchc14
Smg1
Cln8
Trappc3
Map7d1
Syne4
Sdhaf1
Wrap73
Trp73
Cnot1
Crtc1
Cstb
Cdkn1a
Bnc1
Ier2
Crybg1
Dazap2
Cdt1
Aprt
Cwc22
Slc26a8
Mapk14
Abr
Rpgrip1l
Fto
Top1mt
Irf2bp2
Lrp1
Srxn1
Ing1
Cars2
Rps3a1
Mif
Atp6v0c
Amdhd2
Dnajb4
Fubp1
Aunip
Sema3f
Slc26a6
Rmnd5a
Sesn1
Frat2
Fxyd3
Zfp277
Dock4
Cbx8
Hexb
Phrf1
Itpkc
Coq8b
Nemf
Uros
Bccip
Vamp4
Smc3
Sigmar1
Arid3c
A930018P22Rik
Wnt10a
Creld2
Alg12
Esyt2
Tspyl1
Snapc3
Vmn1r20
Tmem260
Wnt4
U2af1
Birc2
Fam149b
Ecd
Cav1
Nup153
Kmt2a
Nol11
Slc35e1
Nudt18
Mdm2
Lrrc24
C030006K11Rik
Nmt2
Dusp7
Pknox1
Cerk
Snap47
Jmjd4
Mapkapk5
Tmem134
Supv3l1
Aip
Rbm4b
Grb10
Itga3
Zbtb7b
Puf60
Clec4n
Atrnl1
Isy1
Lrpprc
Ireb2
Cep63
Anapc13
Rab5c
Lmbr1l
Cse1l
Rap2b
Fau
Tm7sf2
Eif4a1
Tnfsf13
Senp3
Znhit2
Mrpl49
Jade2
Lgals7
Smim4
Nt5dc2
Kpnb1
Srm
Mtmr11
Rapgefl1
Ebpl
Psapl1
Ss18
Fam3c
Rab33b
Ppdpf
Car5a
Banp
Ankrd40
Ptov1
Arhgef19
Lancl2
Uhrf2
Jpt2
Psmb2
Tmem209
Ssmem1
Fbxl22
Zc3h18
Prkx
Atg12
Ap3s1
Bod1l
Pkp3
Pitpnm3
Abhd18
1700034I23Rik
Tnrc18
Get4
Ndst2
Men1
Map4k2
Tigd5
Eef1d
Cdiptos
Cdipt
Shc1
Atf7
Pygo2
Pbxip1
Tead3
Neurl1b
Asah1
Ranbp2
Calhm1
Calhm2
Mindy2
Phf12
Tcf3
Usp22
Slc4a2
Cdk5
Rnf4
Prdx1
Taf4b
Aldh4a1
Pfdn4
Selenow
Fzd6
Ppp1cb
Qrich2
Pwwp3a
Tmem125
Olfr1274
Mansc1
Tubb4b
Slc34a3
Fam166a
Met
Borcs5
Fam189a2
Pnrc1
B230219D22Rik
Aktip
Atl2
Zfp219
Tmem253
Eif4a3
Card14
Cd9
Ankar
Hes6
Urah
Atf3
Tst
Mpst
Bbs2
Asph
Rsph3b
Rps28
Rpl13
Kank3
Abca7
Gan
P2ry1
Ncaph
Itpripl1
Anxa2
Sod2
Tex21
Mthfd1
Cyp2c66
Rassf7
Lmntd2
Frat1
Zfp319
Usb1
Sfn
Hspa4
Lig4
Abhd13
Ints13
Fgfr1op2
Kdm1a
Slc15a4
Tex46
Edrf1
Akap11
Aacs
Micos10
Ost4
Emilin1
Slc27a1
Nxnl1
0610009B22Rik
Tmem139
Casp2
Mysm1
BC005537
Tmem19
Ttc14
Vgll4
Agpat5
Klhl25
Wdr77
Atp5pb
Ube2a
C330007P06Rik
Marchf7
Sdc1
Gga1
Uroc1
Chst13
Pip4k2b
Cltc
Dcaf10
Olfr1416
Ndufa10
Mfsd9
Il31ra
Cd209a
Actr3
Flnb
Fbxo5
Thap12
Rtn3
Cks2
Secisbp2
Grk6
Sik2
Zfp518a
Nphp4
Kcnab2
Baz2a
Atp5b
Mtmr14
Zbtb40
Zfpl1
Vps51
Tmem262
Cdca5
Gm550
Galnt18
Pacs1
Sbf1
Adm2
Ralbp1
Samd4b
Gmfg
Wdr45b
Mfsd3
Recql4
Lrrc14
Ppp6r1
Aen
Cd68
Dicer1
Rrm2b
Ppp1r13l
Cd3eap
Zfyve21
Xrcc3
Map2k7
Phospho1
Atg16l1
Brpf1
Pus1
Ep400
Adamtsl5
Nyx
Tgfbr3l
Lsm1
Bag4
Ss18l2
Nktr
Btg2
Cobll1
Mideas
Luc7l2
Gtf2h3
Eif2b1
Mmaa
Cds1
Ndufb1
Cpsf2
Msmo1
Proser1
Nhlrc3
Eef2
Pias4
Nup50
Rragc
Zzz3
Dap3
Zdhhc5
Pkm
Tas1r1
Nol9
Spink5
Bzw2
Ankmy2
Sp4
3110082I17Rik
Phlda1
Tgm5
Naa40
Lss
Klf2
Tigar
Col8a2
Stk11
Mrpl2
Klc4
Cul7
P4hb
Arhgdia
Zbtb2
Flna
Vwa2
Vsir
Emd
Ranbp3
Fam204a
Dzip1l
Hyal2
Hyal1
Mat2a
Naa80
Hyal3
Unc50
Coa5
Krt5
Capns2
Mex3c
Zfp68
A430033K04Rik
Rps29
Lrr1
Tnnc2
Ube2c
Ankhd1
Anln
9530077C05Rik
Exoc3l
E2f4
Smarca5
Elmo3
Grb2
Mfsd8
Impact
Cwc27
Tmem198b
Dnajc14
Slc25a42
Sdf4
B3galt6
Zbtb32
Kmt2b
Eif3b
Kifc5b
Srsf1
Ccar1
Rab14
Apc
Fam168a
Csrp1
Madd
Meis1
Mef2a
Arf3
Baz1b
Slc5a10
Espn
Lcmt1
Slc46a3
Sema3e
Arhgap17
Sap18b
Sap18
Etfa
Tcf19
Pou5f1
Cchcr1
Cyp2b10
Mon2
Frmd6
Syvn1
Clcn3
Nek1
Atp8a1
Crebrf
Fkbp3
Fancm
Mfap3l
Vamp2
Per1
Sf3a2
Plekhj1
Amh
Arhgap35
Tmem183a
Adrm1
Tmem170b
Rpl22
Rnf207
Slc25a30
Fzd2
Zfand3
Arid5b
Xpnpep3
St13
Dnajb7
Xpo1
Msh6
Tspan4
Polr2l
Cd151
Sympk
Sun1
Foxa3
Cracr2b
Atf2
Tubg1
Retreg3
Taok2
Dnajc30
Bud23
Nup62
Il4i1b
Atf5
Gid4
Hes3
Pdia4
Eed
Pdik1l
Eif4e
Cfap97
Cnot8
Llgl1
Ptma
Slc20a1
Son
Gm36712
Gart
Arfgap3
Tfg
Fosl1
Ccdc85b
Tada3
Arpc4
Herc2
Ppp3cb
Wfs1
Tnip2
Adam10
Tpd52
Dgat2
Kat7
Dot1l
Prpf40a
Arl6ip6
Supt4a
Lrp5
Mark3
Snrnp70
Myh9
Dlgap4
Faf1
Cdkn2c
Shfl
Ppan
Angptl6
Dcxr
Cbr2
Gpcpd1
Dzip1
Cops4
Dnpep
Usp53
Dyrk1b
Ric8b
Ap1g1
Rad23b
Pak6
Nup214
Lrrfip1
Ppp2r1a
Kdm6a
Mnt
Scarb2
Dennd2c
Cryzl2
Bhlhe40
Acap2
Megf9
Cc2d1b
Wdr78
Mier1
Mfap4
Mapk7
Gpatch8
Abcf3
Zdhhc1
Ptcd3
Polr1a
Tsga10
Lipt1
Greb1
Nkx2-6
Kpna1
T2
Olfr806
Wwox
Abhd6
Rab11fip4
Fam53c
Cdc25c
Myh14
Slc14a2
Col16a1
Olfr855
Olfr854
Caskin1
Arntl
Uqcrh
Lrrc41
Sec14l1
Pgp
Mlst8
Bricd5
Uchl3
Arid4a
Smim41
Atg101
Arrdc4
Cox8c
Tusc2
Sp2
Rlbp1
Fanci
Calml3
Fgd4
Zfp949
Igsf8
Galnt10
Gstm5
Fbxo33
Atp1a2
Lenep
Flad1
Cks1b
Aadacl2fm1
Pik3r3
Med1
Cdk12
H2-DMa
Brd2
Znhit1
Plod3
Lsg1
Slc1a1
Osbpl1a
Frmd4a
Rpl19
Cacnb1
Col6a3
Zfp469
Arhgef1
Trir
Get3
Ap2m1
Pkia
Hmox2
Sharpin
Maf1
Gm35339
Cyc1
Top2a
Tcp11l2
Ankrd54
Mtss2
Fam227a
Cby1
Setd4
Cbr1
Eif2ak3
Ska2
Prr11
Ephb2
Rfx1
Dpp9
Myadm
Bzw1
Paxip1
Cdca7l
Abhd2
Rbm25
Rpgrip1
Hnrnpc
Taf6
Mblac1
Cnpy4
Amotl2
Ccser2
Mylip
Mapk8ip1
1700029I15Rik
Id1
Ttll7
Nmral1
Rnasek
0610010K14Rik
Slc39a3
Tepsin
Ndufaf8
Rnf5
Agpat1
Ager
Etv5
Il34
Gm17660
Rusc2
Cenpu
Cd79a
Apobec2
Smg9
Pramel32
Ifna13
Dab2ip
Robo1
Trip10
Gpr108
Fbxl14
Tmem218
Nt5c3
Rarg
Ilf2
Srbd1
Sec23b
Rbbp9
Dnah7b
Tbc1d17
Pnkp
Akt1s1
Dnm2
Rab5b
Pmel
Cdk2
Osbp
Rpl27
Ifi35
Hipk2
Nudt2
Kif24
Slc25a41
Khsrp
Cul2
Slc35e2
Them6
Slurp1
Psca
Oacyl
Tmem145
Prr19
Pafah1b3
Tcerg1
Wasf1
Cdc40
Sfi1
Kctd14
Mdfi
Tjp2
Tom1
Dhx32
G3bp1
Atox1
Trpm4
Hrc
Cytl1
Bmp5
Oxr1
Cspp1
Cops5
Zfp24
Gm525
Traf2
Iqsec1
Arhgef3
Eif4enif1
Atp5g1
Nfib
Oasl1
Zfp821
Zfp143
Gjc3
Zfp869
Mrpl21
Ighmbp2
Trhr2
Uqcc2
Extl1
Slc14a1
Fgfrl1
Sh2d5
Rtkn
Paip2b
Aig1
Inip
Tmem250-ps
Tcp11
Tnrc6b
Rin2
Lemd1
Erp27
Ahnak
Plekhh2
Fam110b
Nfatc2ip
Sp1
Nfe2
Mrps11
Mrpl46
Sstr3