ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX450826 | Hair follicle stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◣ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Jag2
Iqch
Aagab
Phlda3
Gli2
Ajuba
Mia2
Txndc11
Itgb4
Ulk1
Niban2
Mylip
Lfng
Castor1
Ndst2
Serpinb5
1700016H13Rik
Fbxl14
Susd6
Was
Kctd2
Atp5h
Bcl6
Dot1l
Rnf44
Cdhr2
Wdr45
Zmynd8
Limk2
E030030I06Rik
Mzb1
Snap47
Jmjd4
Sncg
Mmrn2
Smg1
Mef2a
Zmiz2
Ndst1
Ss18
Cbr3
Znhit1
Plod3
Mfsd9
Rpl36al
Mgat2
Micall1
Vmn2r102
Mpl
Lrrc56
Hras
Crybg1
Wasl
Ebpl
Polr1b
Col7a1
Sesn1
A930018P22Rik
Akirin1
Agap1
Plekhg1
Fstl5
Dst
Plekha1
Camsap3
Actr3
Rgs12
Map2k6
Fam20b
Mansc1
Nudt18
Crtc1
Fzd6
Gper1
Tjp3
Pip5k1c
Ttll10
Tecpr1
Gm17660
Zfp219
Tmem253
Rpl13
Get4
Id2
Arhgef4
Scd3
Gipc1
Ccdc85c
Itga3
Vwa1
Sema4b
Nfkbia
Phospho1
Ei24
Vpreb1
Top3b
Igll1
Por
Git2
Ankrd13a
Mef2d
Ube2d2a
Gm45915
Agmat
Fstl3
Prss57
Mtmr11
Hdlbp
Set
Zfp667
Tgfbi
Rab11fip4
Gabpb1
Fam83b
Cldn34d
Pa2g4
Upk3bl
1600014C10Rik
Iqsec1
Irf2bp2
Cdiptos
Cdipt
Ucp3
Fnbp1
Krt28
Ift27
Art3
Denr
Mindy2
Rps27l
Cmc2
Cenpn
Awat2
Kremen1
Itpkc
Coq8b
Ndufb1
Cpsf2
Tspan4
Polr2l
Cd151
Cracr2b
Trib1
Frmd6
Col6a1
Slc25a42
Rap2b
Dgkz
Evpl
Trp53inp1
Fbxw4
Mrs2
Syne4
Sdhaf1
Tgm5
Ing1
Cars2
Cdh3
Fbxl22
Kmt2a
Galnt18
Tada3
Arpc4
Sh3rf2
Edrf1
Trrap
Tmem130
Wnt4
Csrp1
Col18a1
Mterf4
Pou4f3
Zcchc14
Usp4
Gpx1
Phrf1
Tmem129
Tacc3
Slbp
Cdca7l
Arrdc2
Dhrs3
Ampd3
Prr3
Gnl1
Cep170b
Syne2
Apoe
Apoc1
Fus
Myl12a
Bcl9l
Brd3
Prkdc
Mcm4
Ptpre
Cep63
Anapc13
Slc25a3
Defb42
Exo5
Sash1
Sun2
Plk1
Zfp811
Btbd2
4930505A04Rik
Tacc1
Dsc3
Txnrd3
Rab6a
Ano10
Olfr435
Tfap2a
Pccb
Septin11
Col8a2
Rmnd5a
Trak1
Mfap3l
Mark3
Fem1b
Cd164
Rnf38
Cyren
Tmem140
Mtf2
Commd1
Zrsr1
Pgs1
Krt5
Ier2
Ncaph
Itpripl1
Fam3c
Abca12
Ppp1r12a
Dnmt1
Cmip
Arpc2
2610507B11Rik
Lpcat1
Noct
Plekhg6
Grip1
Serpinb10
Gpbp1
Pbk
Mfsd4b4
Slc2a12
Isy1
Marchf7
Fxyd3
Psmc3ip
Letm1
Neurl1b
Cflar
Ftsj1
Ctnnb1
Fgd1
Rgcc
Prkx
Klhdc7b
Akt1
Plxnd1
Ly6g6f
Abhd16a
Klrb1b
Cox6a1
Ehd2
Fxn
Rps23rg1
2900026A02Rik
Sox5
Urah
Ankrd40
Grxcr2
Kpna4
Chad
Ptprs
Slc34a1
Hdac2
Zfp629
Borcs5
Tet3
Mbd6
Ddit3
Rpn2
Mroh8
Capns2
Tnr
Aldh9a1
Tjp2
Fam160a2
Cnga4
Arid5b
Oas1f
Cyp2b10
Uros
Bccip
Gramd2
Cthrc1
Hsd11b2
Efcab6
Usp20
BC005624
Smarcc2
Caskin1
Pgp
Mlst8
Bricd5
Aph1b
Atp2a3
Madd
Fam167a
Foxo3
Aqp7
Atg16l2
Ppargc1b
Cdhr4
Inka1
Uba7
Ffar2
Anxa2
Pacs1
Igf1r
Rb1
Ppard
Krt14
Fam189a2
Cdrt4
Adgrg1
Lims1
Aunip
Wfdc3
Dnttip1
Uqcrh
Lrrc41
Men1
Map4k2
Top2b
Il11ra1
Galt
Serhl
Cacnb2
Ccl20
Mdm2
Fer
Hoxa4
Baiap2l2
Apela
Ablim1
Rps9
Hyou1
Pik3c2a
Ddi2
Ube2b
Cdkl3
Tyw1
Sbds
Mark4
Exoc3l2
Bbs2
Zbtb18
Ccnj
Slc30a5
Slc25a24
Atg12
Ap3s1
Sgk3
Mtres1
Rpgrip1l
Fto
Ap1m1
Notch2
Sdk1
Grik4
Rmi2
Flcn
Hmox2
Nmral1
Cavin1
Slc5a10
Syt8
Trpm3
Tnni2
S1pr3
Trpv4
Ptcd2
Mrps27
Tmem211
Mfsd3
Zfp382
Prmt9
Gpt
Hcar1
Tpst1
Cd9
P4hb
Arhgdia
Zbtb7b
Nr3c1
Eif3b
N4bp2l2
Pds5b
Mab21l3
Olfr1302
Trir
Get3
Map6
Best2
Mtdh
Aldh4a1
Ubald2
Pafah1b1
Ptn
Tst
Mpst
Meis1
Cobll1
Eipr1
Plek2
H2-T24
H2-T23
Rnase4
Ang
Dusp7
Dennd4b
Xpc
Lsm3
Cav1
Medag
Naa50
Atp6v1a
Fam149b
Ecd
Fbxo9
Cilk1
Car5a
Banp
Nepro
Rab5a
Lama3
Gnai2
Dut
Sspn
Dgat2
Eif2ak3
Aff1
Rcc2
Cryzl2
Rnf166
Ppm1l
Styxl1
Mdh2
Spink2
Pitpnm3
Cst6
Psmb3
Pcgf2
Lmnb2
Grb10
Gadd45b
Pard6g
Banf1
Pnpla3
Cyp2c66
Ilrun
Fam117a
Ascl4
Ackr4
Srbd1
Glce
Exoc5
Ap5m1
Vsir
Hs6st1
Evl
Lrpprc
Stat3
Gpsm2
Cnot6
Rapgefl1
Epha4
Slc27a1
Nxnl1
Map7
Thra
Hyal2
Hyal1
Zscan25
Tmbim6
Dip2b
Naa80
Hyal3
Ptov1
Cerk
Dnajb4
Arid3a
Gpcpd1
Klf11
Dipk1b
Junb
Hook2
Ahctf1
Il17b
Ahnak
Dgat1
Dennd2c
Krt24
Hexim2
Adgra3
Stag1
Txndc8
Tigd5
Eef1d
Srgap2
Fam72a
Rnf5
Agpat1
Ager
Acrbp
Zfp563
Map3k4
Eed
Srxn1
Mettl16
Snrk
Dzip1l
Brf1
Psip1
Kpnb1
Agrn
Klhdc8b
Ccdc71
Rnf2
Isg15
Ddr1
Dap3
Arf6
Sgpl1
Prox2
Dlst
Usp34
Ndufc2
Pigw
Myo19
Ggnbp2
Commd8
Tiam1
Met
Nfyb
Popdc3
Ophn1
Fam53c
Cdc25c
Rpl22
Rnf207
Galnt10
Epb41l4b
Angptl7
Unc45a
Hddc3
Usp53
Mapkapk5
Adrm1
Tspan9
Slain2
Snx20
Nod2
Asah1
Myo6
Dcaf4
Cc2d1b
Kdm4c
Zp1
Slc18a3
Chat
Tmem260
Top1mt
Wdfy2
Lep
Ephx1
Mapk6
Tsn
Pip5kl1
Dpm2
St6galnac4
St8sia3
Krt222
Nup133
Nphp4
Kcnab2
Zdhhc21
Reep5
Calm1
Unc5b
Trappc3
Map7d1
Aebp2
Arl2
Arl4c
Hspg2
Maml2
Ccdc88a
Pknox1
Mbnl2
Ddx19a
Rusc2
Mob3c
Taf8
Ccnd3
Elovl5
Nbl1
Tekt2
Adprhl2
Kdf1
Gm42323
Cldn8
Slc25a41
Khsrp
Rps28
Kank3
Ubtd2
Nol11
Ppp1r13l
Cd3eap
Dyrk3
Eif2d
Atp6v0c
Amdhd2
Ifitm5
Ulk2
Ifitm2
Lrrfip1
Srsf5
Pdcd4
Ccdc33
Rab11fip2
Trim13
Epha1
Uchl3
Tubb4b
Slc34a3
Fam166a
Cep295nl
Timp2
Rab10
Unkl
Zfp385a
Itga2
Tsr3
Gnptg
Tardbp
Rac1
Eea1
Chit1
Zfp280d
Akap1
Tbc1d2
Il31ra
Prdm10
Cln8
Gm7244
Pkd1
Calm3
Gnb2
Smim4
Nt5dc2
Fermt1
Boc
Sema3e
Mrpl42
Ube2n
Zfp143
Lgals7
Fkbp9
Upb1
Zcchc2
Prep
Cep164
Krtdap
Twsg1
Bbox1
Narf
Cybc1
Tmx1
Gask1b
Ptdss1
Mterf3
Xxylt1
Cltc
Ttc14
Atp8a1
Fzd2
Iffo2
Rnf170
Hook3
Zcrb1
Pphln1
Map4k5
Atl1
Tas2r143
Tas2r135
Trappc6b
Pnn
Klf1
Gcdh
Gzf1
Nomo1
Abcc6
Yes1
Pycard
Ifitm10
BC005537
Acad9
Slc12a4
Atxn2l
Ube2h
Whrn
Nbr1
Brca1
Dnajb1
Tecr
Rhbdd3
Hes3
B230219D22Rik
Dsp
Spink5
Capg
Krt31
Slc25a13
Prpf40a
Arl6ip6
Col6a6
Rnasek
0610010K14Rik
Tex21
Mthfd1
Zfp592
Tagln2
Golim4
Scaf4
Pdik1l
Polg
Pik3r3
Dlgap4
Hip1
Klf15
Abr
Zfp821
Pkn2
Hgfac
Sh3tc2
Septin9
Thap4
Atg4b
Etv5
Ube2d3
Atg4d
Gnaz
Ppp3r1
Greb1
Nkx2-6
Kpna1
T2
Hexb
Olfr806
Wwox
Abhd6
Rita1
Ddx54
Taf15
Mmp28
Myh14
Tmem125
Slc14a2
Col16a1
Olfr855
Olfr854
Arntl
Prkci
Ptcd3
Polr1a
Bhlhe40
Sec14l1
Shc1
Arid4a
Smim41
Rtn3
Atg101
Arrdc4
Cenpe
Cox8c
Tusc2
Sp2
Cenpp
Sod2
Smim24
Gm48552
Fzr1
Dohh
Rlbp1
Fanci
Calml3
Fgd4
Atrnl1
Zfp949
Igsf8
Gstm5
Fbxo33
Atp1a2
Diaph1
Qrich1
Qars
Lenep
Flad1
Cks1b
Aadacl2fm1
Acacb
Med1
Cdk12
H2-DMa
Brd2
Raly
Lsg1
Baz2a
Slc1a1
Osbpl1a
Frmd4a
Rpl19
Cacnb1
Col6a3
Smc3
Wdr77
Atp5pb
Zfp469
Arhgef1
Ap2m1
Pkia
Rps29
Lrr1
Sharpin
Maf1
Gm35339
Cyc1
Pfdn4
Mat2a
Top2a
Tcp11l2
Ankrd54
Mtss2
Fam227a
Cby1
Setd4
Cbr1
Cd209a
Cwc27
Ska2
Prr11
Ephb2
Ewsr1
Rfx1
Nemf
Dpp9
Myadm
Bzw1
Paxip1
Abhd2
Bzw2
Ankmy2
Rbm25
Rpgrip1
Hnrnpc
Taf6
Mblac1
Cnpy4
Amotl2
Ccser2
Mapk8ip1
1700029I15Rik
Id1
Per2
Ttll7
Cdt1
Aprt
Selenow
Olfr1274
Slc39a3
Tepsin
Ndufaf8
Il34
Cnot1
Atp5b
Cenpu
Cd79a
Apobec2
Smg9
Pramel32
Ifna13
Dab2ip
Robo1
Akt2
Trip10
Mtmr14
Gpr108
Tmem218
Cic
Nt5c3
Rarg
Ilf2
Sema3b
Idh3b
Sec23b
Rbbp9
Dnah7b
Tbc1d17
Pnkp
Akt1s1
Dnm2
Rab5b
Pmel
Cdk2
Osbp
Tnnc2
Rpl27
Ifi35
Hipk2
Nudt2
Kif24
Cul2
Slc35e2
Them6
Slurp1
Psca
Oacyl
Tmem145
Prr19
Pafah1b3
Tcerg1
Wasf1
Cdc40
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Sfi1
Ube2c
Ss18l2
Nktr
Tmem41b
Kctd14
Mdfi
Tom1
Dhx32
G3bp1
Atox1
Frat1
Trpm4
Hrc
Cytl1
Bmp5
Oxr1
Cspp1
Cops5
Rsph3b
Mfsd8
Zfp24
Gm525
Traf2
Arhgef3
Eif4enif1
Atp5g1
Frat2
Nfib
Oasl1
Pip4k2b
Gjc3
Zfp869
Mrpl21
Ighmbp2
Trhr2
Sigmar1
Arid3c
Uqcc2
Extl1
Slc14a1
Fgfrl1
Sh2d5
Rtkn
Paip2b
Aig1
Inip
Tmem250-ps
Tcp11
Tnrc6b
Rin2
Lemd1