ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX450830 | Epidermis
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◣ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Jag2
Lrrc56
Hras
Cbr3
Mia2
Ajuba
Akirin1
Rnf44
Cdhr2
Cdhr4
Inka1
Uba7
Cnot6
Rps27l
Tjp3
Pip5k1c
Prox2
Dlst
Pa2g4
Iqch
Aagab
Kctd2
Atp5h
Phlda3
Denr
Scn4b
1700016H13Rik
Evpl
Por
Bmp4
Dut
Kmt2a
Was
Junb
Hook2
Ndst2
Wdr45
Pmaip1
Tecpr1
Ly6g6f
Abhd16a
2900026A02Rik
Lfng
Ptcd2
Mrps27
Asah1
Wnt10b
Arl2
Espn
Hes2
Fam20b
Zscan25
Wasl
Itgb4
Git2
Ankrd13a
Txndc11
Sh3bp1
Plekha1
Flcn
Srxn1
Met
Ptdss1
Mterf3
Prdm10
Gm7244
Ube2b
Cdkl3
Rpn2
Mroh8
Rmnd5a
Atp6v0c
Amdhd2
Trappc3
Map7d1
Fstl3
Prss57
Sash1
Cmc2
Cenpn
Psip1
Noct
Fbxo9
Cilk1
Fam83b
Arhgef4
Tpt1
Diaph1
Ss18
Cdt1
Aprt
Eea1
Cdca7l
Ccdc85c
Fbxo33
Wnt10a
Bcl6
Dot1l
Zfp277
Dock4
Gipc1
Cenpp
Zfp219
Tmem253
Raly
Sod2
Wnt3a
Polg
Per2
Niban2
Slc30a5
Kremen1
Fam3c
Atrnl1
Myl12a
Fermt1
Madd
Mtf1
Polr3g
Mblac2
Yrdc
1110065P20Rik
Fbxl14
Myo6
Tmem129
Tacc3
Slbp
Tmem41b
Ireb2
Letm1
Gramd2
Agap1
Prdx2
Rnaseh2a
Shmt2
Ndufa4l2
Fzd6
Agpat5
Lrrc24
C030006K11Rik
Fer
Tjp2
Ss18l1
Psma7
Dock11
Mtmr14
Cd47
Rnf14
Akt2
Myl12b
Mindy2
Rita1
Ddx54
Cd164
Dnmt1
Tacc1
Mylip
Smim41
Atg101
Dap3
Prr3
Gnl1
Col7a1
Cerk
Vwa1
Phrf1
Ppm1l
Ube2a
C330007P06Rik
Aff1
Aph1b
Ei24
Col16a1
Cul2
Nup50
Eif4a3
Card14
Akap11
Tspan4
Polr2l
Cd151
Tagln
Bzw1
Prpf40a
Arl6ip6
Calm3
Slc35e2
Adnp
Fam149b
Ecd
Grb10
Tardbp
Rhbdd3
Ewsr1
Mmp15
Hsf1
Bop1
Crtc1
Taf15
Mmp28
Sri
Ndrg1
2610507B11Rik
Ttc14
Bcl9l
Arhgef19
Rpl36al
Mgat2
Rsc1a1
Rab11fip4
Ssrp1
P2rx3
Susd6
Ptov1
Set
Micall1
Kctd17
Pip4k2b
Ephb2
Arpc2
Serpinb5
Pkia
Spc25
G6pc2
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Tigd5
Eef1d
Tcp11
Rlf
Rusc2
Ifi30
Pik3r2
Lsr
Fam187b
Snrk
Limk2
Marchf7
Mrs2
Tmem260
Supt4a
Hdac2
Rps28
Uhrf2
Syvn1
Kank3
Sfn
Pard6g
B230219D22Rik
Epm2a
Prkci
Mdm2
Gm5767
Carhsp1
Apol8
Pank1
Tmco1
Cep63
Anapc13
Tead3
Vwa2
Zfp629
Mfsd4b4
Zcchc2
Ulk1
Crybg1
Cenpe
Dst
Cln8
Mtch2
Unk
H3f3b
Gnb2
Glce
Ndst1
Sigmar1
Arid3c
Hsd11b2
Castor1
Tmem175
Gak
Ndufb1
Cpsf2
Birc2
Plxna3
Fkbp3
Fancm
Pdik1l
Rab21
Znhit1
Plod3
Gtf3a
Smc3
Sec24a
Sar1b
Nprl3
Hba-x
Slc25a42
Mpl
E030030I06Rik
Fus
Tfap2a
Dusp7
Tipin
Zfp385a
Mark4
Exoc3l2
Acp5
Zcchc14
Fam160a2
Cnga4
Plekhg1
Arid5b
Zmynd8
Sema4b
Fosl2
Fam227a
Cby1
Men1
Map4k2
Zmiz2
Ccna2
Shc1
Pygo2
Pbxip1
Btg3
Eif4a1
Cd68
Dhrs3
Vmn2r102
Krt14
Bzw2
Ankmy2
Tmem40
Sncg
Mmrn2
Chst15
Prepl
Camkmt
Aldh9a1
Adora2b
Gm17660
Polr1b
Mef2a
Rassf7
Lmntd2
Map7
Tas1r1
Nol9
Car5a
Banp
Zfand3
Slc26a8
Mapk14
2810021J22Rik
Mzb1
Lrp1
Iqank1
Fam83h
Gba
Thbs3
Mtx1
Esrp2
Dsc3
Flnb
Plekhh3
Cntnap1
Ccr10
Zzz3
Rpgrip1l
Fto
Cracr2b
Pgs1
Prkdc
Mcm4
BC005537
Eid1
Rapgefl1
Krt15
Krt19
Msmo1
Cwc22
Usp34
Il17rc
Xpc
Lsm3
Usp20
BC005624
Ppp3cb
Wdr89
Fam126a
Fam162a
Ccdc58
Popdc3
Rgs3
Brd3
Vrtn
Ffar2
Tgfbi
Nr4a3
Cspp1
Cops5
Adamtsl5
Ak4
Fam189a2
Ube2cbp
Dop1a
Rgs12
Smarcd3
Usp2
Col6a6
Arrdc2
Ankrd11
Fosl1
Ccdc85b
Nudt18
Ano6
Tst
Mpst
Bod1l
Puf60
Mansc1
Rraga
Timm23
Parg
Pik3c2b
Ddr1
Qrich2
Wdr38
Rpl35
Arpc5l
Fnbp1
Bcar3
Bnc1
Sspn
Iqsec1
Slc25a33
Pacs1
Paxip1
Vwa7
Gna15
Lsm14a
Zfp526
Dedd2
Perp
Saysd1
Ap5b1
Ovol1
Fzd10
Dgat2
Ahnak
Cdiptos
Cdipt
Tpbg
Reep5
Tmem250-ps
Mcts2
Ppp1r13l
Cd3eap
Tbca
Zbtb2
Plekhg6
Coro2a
Dis3l
Kdm2b
Mysm1
Ptpn4
Parp6
Galnt10
Chit1
Olfr1274
Jade2
Cstb
Slc39a9
Erh
Calhm1
Calhm2
Sec31b
Nptn
Zfp319
Usb1
Zfp667
Septin11
Tmem19
Ezr
Fbxl22
Micos10
Tmpo
Srsf5
Bcl2l11
Irf6
Perm1
Selenow
S1pr3
Man2a2
Top1mt
Ptprj
Mob2
Ift27
Gli2
Snap47
Jmjd4
Sox9
Vopp1
Frat1
Cdh3
Mroh3
Nphp4
Kcnab2
Frat2
Baz2a
Prep
Frmd6
Nr3c1
Aldh4a1
Epb41
Ss18l2
Nktr
Rap1gap
Rbbp6
Krt28
Sh3rf2
Scamp5
Gne
Map2k6
Dgkz
Sirt4
Bbs2
Zfp692
Trrap
Tmem130
Kpnb1
Klrb1b
Psmc3ip
Ndfip2
Cldn34d
Dyrk3
Eif2d
Trib1
Usp15
Edem1
Slc35e1
Siglec15
Cdrt4
Zdhhc1
Gper1
Crebrf
Lamp1
Fam53c
Cdc25c
Fra10ac1
Mark3
Stxbp4
Cox11
Tmem139
Casp2
Ankrd40
Pbk
Trak1
Fbxw4
Ppm1d
Aebp2
Grip1
Exo5
Hmgcll1
Golim4
Hes3
Tspan3
Atf7
Pfdn4
Laptm4a
Rnd3
Tnks2
Bbc3
Fam241a
Snx33
Imp3
Olfr435
Arf3
Lancl2
Hdlbp
Eif3b
Fmnl3
Lims1
Hdac1
Edrf1
Nfatc1
Ing1
Cars2
Smarcc2
Satb2
Zmym3
Nono
Il15ra
Rlbp1
Fanci
Cirbp
Fam174c
Rps3a1
Cthrc1
Akt1
Rnasek
0610010K14Rik
Il31ra
Atl2
Fam53a
Drg1
Lrpprc
Awat2
Erf
Tbx1
Rab40c
Birc6
Uchl3
Hs3st6
Olfr741
Ets1
Wnt4
Fxn
Bcorl1
Klhdc8b
Ccdc71
Tex264
Mroh6
Myo5a
Lrch1
Haspin
Efcab6
Zfp513
Snx17
Eif2b4
Id2
Tpst1
Abcg2
Pknox1
Kank1
Rtn3
Cltb
Hmox2
Nmral1
Gabpb1
Ttll5
Erg28
Mob3a
Izumo4
Mrpl40
Hira
Cd101
Actr3b
H3c15
H3c14
H2ac19
H2ac18
Esx1
Dkk3
Inava
Septin7
P4ha1
Hspg2
Vamp4
Ahdc1
Arhgap27
Fbxo34
Commd1
Vmn2r72
Zrsr1
Abca7
Taf9
Rad17
Ak6
Pdia3
Catsper2
Ier2
Lgals7
Top2b
Nr2c2
Cd209a
Inka2
Dazap2
Zfp811
Etfa
Fstl5
Ostf1
Nmrk1
Brd1
Zfyve21
Xrcc3
Hexb
Tpp1
Taf10
Rgl2
Wdr46
Pfdn6
Pik3c2a
Zranb1
Dennd4b
Uap1
Etv3
Zfp91
Lpxn
Smyd4
Rpa1
Mprip
Srp9
H2-L
H2-D1
Ankrd26
Fmo3
Abhd18
1700034I23Rik
Dip2b
Vamp2
Per1
Gan
Mcc
Frmd4b
Pccb
Lrp5
Suv39h1
Kdf1
Gm42323
Smg9
Wasf1
Cdc40
Tnrc6b
Trappc6b
Pnn
Atl3
Nyx
Tma7
Ccdc51
Atrip
Pak6
Topors
Smim27
Ndufb6
Stub1
Jmjd8
Oas1f
Rhbdl1
Rhot2
Rb1
Efnb2
Ubald1
Mgrn1
Sox5
1600014C10Rik
Znfx1
Defb42
Itga7
Atg12
Ap3s1
Mfsd12
Hmg20b
Gipc3
Clasp2
Meis1
Ttf1
Cfap77
Cldn34c1
Mat2a
Irf2bp2
Get4
Ehd2
C1galt1
Ttc32
Epb41l1
Krt5
Gpr19
Caskin1
Pgp
Mlst8
Bricd5
Rpl13
Micu2
Xpo1
Galnt18
Raver1
Fgd1
Sf3a2
Plekhj1
Amh
Crem
Sec62
Zfp563
Gpi1
Tbc1d17
Pnkp
Akt1s1
Atg16l1
Spred2
Ppp1r14c
Fam117b
Celf1
Kpna1
Tada3
Arpc4
Upk3bl
Crocc2
Lrp11
Lpcat1
Mab21l4
Slc20a1
Ttk
Abcg1
Map3k7
Xxylt1
Msh6
Npb
Anapc11
Alyref
Cltc
Mfsd3
Recql4
Lrrc14
Elmod2
Rps26
Flna
Emd
Fdx1
Ctnna1
Acacb
AA467197
Spata5l1
Pbp2
Cbx8
Rnf38
Ncaph
Itpripl1
Baiap2l2
Slc25a22
Rplp2
Pidd1
Pura
Zbtb7a
Cacnb2
Lama3
Mideas
Lmnb2
Rap2b
Ung
Alkbh2
Plk1
Evl
Gadd45b
Olfr544
Olfr543
Ttll10
Trir
Get3
Them6
Slurp1
Psca
Slc15a4
Il11ra1
Galt
Best2
Prkcd
Lsm1
Bag4
Dcaf4
Nos1ap
Atg16l2
Rel
Tyw1
Sbds
Naa50
Atp6v1a
Mrps7
Mif4gd
Gga3
Cmtr1
Proser1
Nhlrc3
Phka2
Phldb2
Gbe1
Thra
Scamp1
Trip10
Gpr108
Syne4
Sdhaf1
Gnas
Smim24
Gm48552
Fzr1
Dohh
Rpl19
Cacnb1
Nt5c3
Ccnl1
Acsl5
Vgll4
Rara
Maz
Rnf7
Prrt2
Pagr1a
Ralgps1
Mvp
Slc2a6
Smg1
Srm
Wdr45b
Mlec
Cep128
Cav1
Rmi2
Chuk
Mbtps1
Lactb
Il20ra
Erp27
Il17b
Arhgdib
Zfp382
Picalm
Prmt9
Phc2
Camsap3
Ccpg1os
Ccpg1
P2ry1
Oacyl
Got1
Has1
Dicer1
Btbd2
Disp3
Matr3
Gm10037
Nectin3
Rhobtb1
A930033H14Rik
Sesn1
Atp10a
Bcl2l1
Wnt7b
Tada2b
Ccdc96
Tex38
Atpaf1
Fabp5
Ykt6
Gck
Znrf1
Kif2a
Mfsd8
Socs5
Spint2
Ppp1r14a
Nipal4
Nsmce4a
Ccl20
Isy1
Srsf10
Tmem134
Aip
Sik2
Vsir
Wrap73
Trp73
Cotl1
Tcf25
Med1
Cdk12
Hspa4
Phospho1
Wdr61
Krtdap
Map3k20
Nradd
Flot2
Dhrs13
Rps9
Prkag2
Stard4
Nrbp2
Elavl1
Lrfn3
Bahd1
Cd9
Ppard
Pfkfb2
Yod1
Abr
Stau1
Cep170b
Fam104a
D11Wsu47e
Fam204a
Ltbp4
Ppfia3
Lin7b
Wdr4