ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
ZNF550
KCNJ15
SMYD3
ADAMDEC1
ZSCAN32
ZNF174
DUX4
MTRNR2L8
MSH3
DHFR
MTRNR2L2
BTBD8
KRBA1
WDR74
STX5
RAB37
CLDN18
MTRNR2L1
PI4K2B
OBSCN
SMCO1
ARHGAP45
ZSCAN31
TSC22D3
NCBP2L
TMEM43
CHCHD4
PAXBP1
ZWINT
GBA
LOC102724770
DGCR6
SLC28A2
TTLL1
ZNF514
FAM178B
NOX5
RGPD2
RGPD1
FKBP9
OR4K17
KIF5C
ZNF222
ABCC9
JDP2
RGS18
LIMK2
LCE3B
LCE3A
GOLM2
APOC3
APOA1
MID2
PTPRN2
DCP1A
ZNF613
RAPH1
UBC
TRIM48
ZNF134
FBXO31
ZBTB8B
RBBP5
ARID3A
BSDC1
DIO2
NPR1
ILF2
MMEL1
ZNF317
LMTK2
DACH1
ST20-MTHFS
UQCRC1
TMEM89
ZNF761
HTR5A
BRSK2
H4C8
DIP2B
FMO4
TDP2
ACOT13
NXPE4
FAM167A
RAX2
MATK
C19orf18
ZNF91
HLA-DRB1
NDUFS7
CCL24
DEFA6
LOC102724265
FRG2C
TOP3B
IRAG2
FAM184A
ATAD2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTRNR2L9
POU2F1
ATP5F1B
FAM209A
TARS2
SNAP47
JMJD4
PRIM1
HSD17B6
COX16
SMG6
TBC1D19
ACP6
CCDC130
SLC44A1
GPR19
EIF2D
HECW2
GLT6D1
B4GALT7
TMED9
SUB1
UBE3C
USP30
ZNFX1
TRIM9
AGR3
FRG2
DEGS2
GSTT4
CABIN1
SAMD7
CYP4X1
MKLN1
GPR35
NCOA7
PRSS38
NARS2
UBE4A
SLC36A2
MYH2
CXCR2
FUT8
RAB11FIP1
PIP
OTUD7A
COMTD1
TPM1
ITGB3BP
EFCAB7
TNFRSF13B
TEX38
ATPAF1
ZMYM3
WDR33
FAM227B
DTWD1
RAD54L2
OR4X2
NUF2
CDHR1
TLR9
NCBP3
PDP1
COMMD2
NPAS4
ATP5MC2
ZNF76
C5orf46
TLE7
LY6L
PER3
TMEM259
CNN2
TSPAN10
NPLOC4
CCDC88B
CITED4
SLC33A1
RPS14
ZNF34
DNAH6
HTN1
CASC3
OR2F1
WDR11
EPS8
CNGA3
RD3L
CPT2
MRPL38
TRIM65
TATDN3
NSL1
BCL9
NCLN
S1PR4
OR2B2
H2BC17
H2AC17
SAMD4B
GMFG
TACO1
ZNF394
S100P
STK39
CARD14
FAM174B
DMAP1
KNL1
CALM1
BARHL1
TNKS2
CRP
JAK1
UBE2F
ALG6
AURKAIP1
TINAGL1
DENND11
DBNDD2
PIGW
MYO19
GGNBP2
IRAK2
BCR
GPD1L
ZNF491
ZNF440
WWOX
CHST3
WDFY1
ZSCAN18
SNX19
NGB
PRDX6
LEP
TAFA2
NAP1L4
PADI4
PDE7B
ANAPC1
PPP6R1
IQSEC3
PDRG1
ERCC4
NDST2
ZNF555
BLK
RHOT1
ATP1A1
MAP3K7CL
CORIN
HMGB1
USPL1
NEMF
TM9SF1
UTP3
IPO4
ZNF670
RGPD6
RGPD8
RGPD5
MTNR1B
TOR1AIP2
TOR1AIP1
STAT1
ZCCHC4
PDE8A
TTYH1
SPINK8
PRR25
GNG13
CHTF18
RPUSD1
GBP7
ZNF662
TRIP4
PCLAF
STX18
CCDC150
RRP15
KRTAP9-9
KRTAP9-6
DRG2
OR2AP1
KATNBL1
SYT3
EIF4A3
TSKU
ACYP2
GRM4
OR6B1
DPH6
TMEM229B
MTF2
ZNF501
EXOC6
ZNF502
EPRS1
LGI1
CNTNAP4
SAP130
METTL15
KIF18A
BAIAP2L2
ANKRD20A1
COL23A1
RPS29
FSIP2
RILP
SLC44A3
NOD2
CXCL8
C2orf66
ZNF433
RERE
CDYL
KLHL12
TRPC3
FGD3
ZNF708
RHEX
MZT2A
PAX4
LRP11
ZFP30
STRBP
PDE4DIP
CD209
NOTCH2
DSTYK
CRLF2
SNTG2
FETUB
FOXN1
CCDC92B
BFSP2
MRPL21
IGHMBP2
GNAL
ZNF124
LDHD
SPACA3
EPB41L2
SMIM12
COPS4
DUS1L
PRSS22
RPS6KB2
PTPRCAP
COG2
IAPP
NCOA3
GABARAPL1
TBC1D22A
C2orf88
TEFM
FAF1
POLE4
PCYT1A
CDKN2C
KRTDAP
B4GALNT4
IGFALS
FAM98B
ALG10B
BABAM1
FRG1
XYLB
SCIMP
CASTOR1
NUDT15
ZER1
CDC73
TAF1C
ADAD2
ABRA
RTP5
MYLK
FAM207A
TJAP1
THEM4
MFAP3L
MKRN2OS
MKRN2
COL6A1
LHX6
STX16
CADM3
ZMAT2
HARS2
HARS1
PLK1
RHOG
CREG1
CACNG4
RPS7
NINJ1
POR
FAM72B
KRTAP26-1
CLEC19A
CLTB
RNF217
PKN2
COQ9
CIAPIN1
TTLL12
ALKBH3
ZFP37
CAPG
TACC2
SH2D6
ARSD
MED23
NEUROD4
POLN
HAUS3
UIMC1
GATM
PCDH1
SF3A3
UGT1A10
FAM160B1
ELAVL3
SPTBN4
SYAP1
CDK2AP1
LOC388282
BLVRB
SDHAF3
MUC3A
CYP17A1
SNX16
SELENOH
ATAD3A
STX6
SLC24A1
AGK
DOCK3
CCDC200
DCAF10
ARHGAP32
PCARE
RBBP8NL
MPZL1
C8orf74
SIT1
CCDC107
ARHGEF39
POLG
IKZF3
ZPBP2
ZMPSTE24
ZBED9
SMIM17
ADPRH
PAX5
ZNF169
LAG3
CD55
ZNF598
CAPN2
NPW
SHTN1
SLC25A51
NSFL1C
NEMP1
NAB2
NUP107
FCGR3A
BCAT2
INTS5
GANAB
MRPS14
CRH
ADAMTS17
THBS1
ZBTB26
RABGAP1
TMEM242
TTC26
CBR3
IGSF11
MFSD4B
TEX55
CDK3
MDM4
MTR
CEP72
CSRP1
SLF1
KIAA0825
ADTRP
IFIT1B
ACOX3
CDK5RAP1
NR1H3
ACP2
RHOT2
RHBDL1
FGD4
ISM1
SCRT1
DGAT1
TRIM52
SLC35E3
ITGA7
BLOC1S1
ZZEF1
CYB5D2
HIBADH
ATAD2B
TLE2
RDH5
TLE5
ZNF527
MRPS31
TMED1
GPAM
CFAP73
RAPGEF1
CALCB
ADNP
PACC1
LAMA5
ATG4C
ABLIM1
RBM25
TFAP4
SNX18
VARS2
GTF2H4
MRPS18C
HELQ
GPRIN2
VWA1
TMEM88B
LTB4R
LTB4R2
CIDEB
IMP4
CCDC115
PRKG1
CERS3
LCE4A
C1orf68
FBXW7
LIMCH1
GCGR
EIF4EBP1
ZNF792
MTERF4
OR10A3
SSBP1
SRFBP1
CCDC174
CCNB1IP1
PARP2
MFAP4
ZNF652
CREG2
TNFAIP2
ADRM1
NUP210
ADAM2
DOCK7
MT1X
NUAK2
RAF1
CEBPA
TRANK1
AKIRIN1
SYT7
HECTD2
FURIN
IKBKE
SNX11
CBX1
USP2
MIER2
DPP9
XKR8
FAM214A
TPK1
PNPO
BUD13
ZNF35
GSTO2
PRR15L
AP3B1
SAAL1
PXYLP1
KLKB1
FAM193B
CTAG1B
CTAG1A
GINS1
RNF187
AARS2
ACVR2B
MT1B
MT1A
TYW3
CRYZ
PUM1
CORO7-PAM16
CORO7
SACM1L
TMEM161A
CLUAP1
SCAMP2
C16orf90
THG1L
MPI
FAM25E
ZC3H6
GET4
SYK
PCP4L1
C12orf43
ZNF829
ZNF568
CXXC5
KCNB1
ZNF443
ZNHIT6
ZNF436
CYB5R4
AADACL4
F2RL3
YPEL3
TBX6
BPIFB3
THUMPD1
ZNF24
FAM153B
CNGA1
PDE11A
SNCG
MMRN2
GTPBP4
ZSCAN30
MANEA
COX6A1
LMLN
IQCG
ANP32D
TATDN2
LMLN2
IER3IP1
ADAM21
ZNF143
CDCA7
ZNF117
SHISAL2B
TEAD2
DKKL1
FAM234B
TLR2
PTGER2
GORASP2
RGS21
CYP2C9
TACC1
EDF1
CFHR4
ACY3
SLC30A7
EXTL2
ZNF3
MBOAT4
DCTN6
C10orf143
BCAR3
TTC7B
SULT1C3
ZNF572
FEM1C
ADCY10
APOBEC3B
IL22RA2
ZNF324B
ZNF132
BAAT
SUMO3
VPS13D
METTL8
COMT
TSPAN5
MRPS16
TXNRD2
NKX1-1
PPIG
PEX7
INKA2
DDX20
DCAF17
HACD2
KAT6B
MINDY3
MAP3K4
AKR7A3
ST3GAL5
DMXL2
NT5C3A
GSTM5
SLC27A5
ZNF562
SARS2
MRPS12
YJU2
PPP2R3A
SELENBP1
RBPJ
MAPRE2
SPATA33
PXDNL
PNMA3
SLC1A7
COL18A1
SCCPDH
ZNF426
FDX1
IFNAR2
ELAC1
ZNF83
YWHAQ
SNX20
TTC30B
C2orf69
ZKSCAN7
ZNF30
RABGAP1L
ARHGAP39
DNAJC25-GNG10
DNAJC25
NARF
CLIC3
APOL4
CAT
POLD1
YY1AP1
DAP3
PSMD8
GPRC5C
METTL7A
ACAA2
ZBTB44
NRARP
GALNT1
TMCC3
RSU1
PAIP2B
MROH7
LBP
DIP2A
MON2
MAPK11
ART1
ZNF556
MRPL55
FASTKD1
UBE2D3
DUSP6
RPL39L
ACER2
CISD2
ZNF623
IFI6
TEDC1
CRIP1
ABLIM2
RFC1
TMEM62
ZNF627
ZNF165
FRMPD4
CYBC1
TIMELESS
TMPRSS12
C1GALT1C1L
PNPLA7
MRPL41
SMIM31
CRIP2
LCN8
ACBD6
PLA2G4E
LILRA5
FGL2
CLPP
RBM33
SUPT6H
SDF2
PDCD7
RPL10L
GRAMD4
LCN15
SAMD14
SDR42E1
C4B_2
C4B
JMJD1C
SRPRB
MAD1L1
NCKAP1L
CREBL2
C16orf54
CHD1L
FAAH
B3GALT2
LGALS12
FRRS1
HAUS5
MACC1
PRKACB
LRIG2
SEM1
PRRT1B
SLC2A7
TMCC1
RNASET2
ZNF878
MRLN
MAP3K2
PEX3
ADAT2
EAPP
FRA10AC1
SATB1
TESK2
MMACHC
PLAAT5
ZNF487
BAX
RPL27
IFI35
MYOG
OAZ3
SCGB1C2
SCGB1C1
ZNF341
CANT1
NFE2L3
B4GALNT3
RBBP9
MRPS33
C3orf14
ZNF594
SPATA13
ARL4D
C1orf159
CEP85
KIF2C
RPL11
WDR3
TTC32
GDAP2
TAS2R39
BTN3A3
BORCS7
NBPF1
MOB3A
IZUMO4
LOC110384692
C4A
RPGRIP1L
FTO
SUPT7L
SLC4A1AP
PIAS2
COLEC11
LUC7L2
REM1
DEFB124
TM9SF2
FKBP11
FMC1-LUC7L2
FMC1
ZNF577
LSS
ACTL8
SMAD1
TMX2
MED19
MSRA
CD2
ODF3
TRMT44
FN3K
CALD1
THOC5
EFCAB10
PIN4
VBP1
ZNF614
TMEM14C
SPATA22
ZNF566
GAS2L3
LRP5L
SEC22B
GJC3
NME1
GLRA1
SLC38A9
GALK2
TMEM125
INTS12
GSTCD
ZNF891
ZNF10
LHFPL4
SCAF11
ZC3HAV1
TEX50
SLC41A3
SEMA3D
PARK7
TMEM44
RTP3
LTF
ETFBKMT
TMEM262
ITPR2
TBC1D13
FEM1B
PCYOX1
ZNF32
TMEM106C
ASPA
KDM3A
LCN6
SLC17A5
PGLYRP4
NOS3
TMCO2
RRAGB
SAR1B
VPS37C
GTDC1
DLAT
ZNF611
LRP5
BRF2
PLK2
RPL37
CARD6
REEP3
LIMS2
LOC100289561
ZNF391
GCNT1
S100A2
RMDN2
NRL
DCAF11
DUSP16
CYC1
CEACAM21
MNAT1
CALCRL
PHRF1
MAPK10
LSG1
LARP1
MTERF1
REXO4
ADAMTS13
ACSM2B
VN1R4
CASP10
ERN2
CD14
MLLT1
TRMT5
SLC38A6
POLR3B
ADI1
NTSR2
CADM2
KCNMA1
SKP2
LMBRD2
FKBP5
ATP9B
IL21R
ZNF589
GTF3C3
DHRS2
TMEM41A
GTF2A1L
MOB4
UBE2H
NEU1