ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150671 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BRSK2
ZNF436
PI4K2B
ZWINT
OBSCN
BSDC1
ZNF550
CYB5R4
MID2
ZNF555
APOC3
APOA1
CCDC200
ITGB3BP
EFCAB7
ZSCAN32
ZNF174
FGD3
SMCO1
AADACL4
C19orf18
MAPRE2
WDR33
ZNF514
ZNHIT6
SMYD3
MAMDC2
KAT6B
MRPL55
ZBTB26
RABGAP1
DEGS2
SELENBP1
RRAGB
INKA2
DDX20
F2RL3
ZNF134
ZSCAN31
YPEL3
TBX6
ZNF556
ZNF572
TTLL1
ZNF24
STC1
PRKACB
NRARP
SRPRB
ZNF3
UBE2F
ST20-MTHFS
SAMD14
AKR7A3
KRBA1
ZNF623
DUSP6
LDHD
ZNF433
ZNF878
RBBP5
SF3A3
CPLX1
TSPAN5
RABGAP1L
EIF4A3
IFNAR2
YWHAQ
ABLIM2
NOTCH2NLC
NOTCH2
TSKU
DHRS2
MKLN1
ARHGAP39
NXPE4
ANO9
PTDSS2
RCAN1
COL18A1
ZNF426
FAM209A
ZBTB8B
GPR35
ZNF829
ZNF568
GALNT1
NKX1-1
PDE11A
ZNF501
ZNF502
MYOG
NOTCH2NLB
NOTCH2NLA
ZFP30
ATF7IP
TMEM229B
ZNF891
ZNF10
MTF2
FRMPD4
NUF2
ZNF32
TBC1D22A
CANT1
MRPS33
C1QTNF1
SUMO3
COX16
FAM184A
EDF1
UQCRC1
TMEM89
TARS2
GABPB2
TMEM109
MLLT11
TMEM132A
SAMD4B
GMFG
NOX5
MROH7
ZNF594
GTPBP4
GLT6D1
ZNFX1
MSRA
KDM3A
THEM4
GBA
ZNF222
PRSS38
B3GNTL1
MTRNR2L8
RTP5
SLC33A1
ATP5F1B
IER3IP1
WDR74
STX5
ID2
C10orf143
OPRL1
RGS19
LKAAEAR1
ZNF792
GLYATL1
ATL1
TMEM161A
ZNF350
ZNF491
ZNF440
LCA5
BPIFB3
DBNDD2
NDUFB3
FAM126B
TEAD2
DKKL1
ZNF117
PAXBP1
MTR
IL22RA2
RPL27
IFI35
TBC1D19
ISY1-RAB43
ISY1
ZNF404
YY1AP1
DAP3
SSBP1
ANP32D
DISP1
FN3K
SUPT7L
SLC4A1AP
ATP5MC2
VPS13D
COQ8A
GLIPR1L2
CDCA7
NARS2
RBM33
ACTL8
DNAJC25-GNG10
DNAJC25
CALCRL
NBPF1
COX7A2
ZNF772
SLC2A8
RPIA
UTP3
SAMD7
TFPT
PRPF31
TRIP4
PCLAF
ZBED9
TTI2
RNF125
COL4A6
COL4A5
AURKAIP1
CRLF2
PRRT1B
ZNF408
ARHGAP1
ZNF83
ZNF662
ARID1A
ZNF165
TBL1X
MAP3K4
SLCO1A2
TLE7
SLC30A7
EXTL2
RPL12
LRSAM1
KRTAP5-2
KRTAP5-1
ZNF300
SNX11
CBX1
CROT
DMAP1
SAP130
DNAJB12
ACY3
SERPINA3
NDUFS7
VARS2
GTF2H4
ZNF75D
PNMA3
RPS7
PRRG2
NOSIP
ZNF540
ZNF571
AHCYL1
GYPC
SULT1C4
ALG14
SIPA1L2
LY6K
ZMPSTE24
TMCO2
LIMK1
HECTD4
PLA2G4E
LARP1
JMJD1C
COMMD2
CEP85L
DUX4
USP21
ZNF461
UFC1
ACP6
ZSCAN18
TM2D1
ZNF470
RPS29
TESK2
MMACHC
ZNF324B
ZNF132
GRAMD4
NOP16
HIGD2A
ZNF20
TLR2
ZNF527
NTSR2
COPS4
CYP46A1
EXOC6
LCN8
LCN15
LCN6
VTA1
NMBR
METTL25
CCDC59
CREM
SCTR
HDAC8
RERE
ZNF577
PPIP5K2
SMTN
MS4A10
ANKRD35
AASDH
FBXW7
GADD45A
IRF2BP2
SLC1A7
PIH1D2
NKAPD1
CACNG1
MIS18BP1
LMTK2
RAB30
ZSCAN22
MED23
LMBR1
SLC28A2
ZNF614
CCL24
NUP107
ZNF454
GPBP1
NEMF
SGPP1
ZNF416
TEX50
CFAP298-TCP10L
CFAP298
GDNF
NPR1
ILF2
SCMH1
GPC6
TEFM
TTC26
MNAT1
COL23A1
C2orf69
GRPEL2
CNIH4
HEATR1
TMEM14C
TRMT5
SLC38A6
ADGRF1
FAM193B
CAT
SOX30
RDH12
CDK14
SNX20
ABR
LRP5L
EPHA3
OR4K17
TACO1
LPIN1
BRF2
SPATA33
PAFAH2
EPRS1
EPB41L2
PEX3
ADAT2
TTC32
EIF3F
SPANXB1
WDR11
ZNF726
TMEM242
CD14
ZSCAN29
TUBGCP4
NME1
TMEM125
PDXK
TEDC1
CRIP1
CRIP2
PXDN
REXO4
ADAMTS13
MRPL1
STAT3
ATF7IP2
ARL4D
MRPL48
ATP5MF-PTCD1
ATP5MF
DOK3
DDX41
RAD51AP1
C12orf4
SLC25A53
FAM199X
OR1F12
CLTB
POLR3B
RCAN2
HLA-E
ELFN2
BORCS7
ZNF135
PRDX6
EIF2S1
ATP6V1D
SELENOH
ATG4C
PIKFYVE
KRTAP10-2
KRTAP10-1
TEX46
KDM1A
SUCLG1
CDK19
AMD1
C8orf37
TMEM259
CNN2
PPRC1
YJU2
IL36B
IL36RN
TAS2R39
GTPBP3
ANO8
INTS2
ZNF391
FAM13A
RPL37
CARD6
MYO1H
TRMT11
HAPLN2
CPPED1
IL17F
ZNF613
SAR1B
B4GALNT2
CDC5L
IGFALS
ZNF708
RNF187
RPS26
IRAK2
ZNF263
LUC7L
FAM234A
PFDN1
EIF1AD
CST6
BANF1
CCNI
MT1HL1
PEX7
LGALS3BP
MAN2A1
MBOAT4
DCTN6
WEE1
RBBP9
INTS5
GANAB
ARID3B
HAX1
PDP1
MYH2
ZNF226
ZNF879
GNB1
PCYT1A
BORCS6
LOC100289561
TNFRSF1B
RAG2
IFTAP
ELAC1
PNPLA7
MRPL41
PUS10
PEX13
ZNF791
ZNF490
NOL8
CENPP
ZSCAN30
PCDH15
B4GALNT4
PLAGL1
ELFN1
SLC24A1
SLC45A4
SMG8
EFHD1
SF3B5
PER3
MINDY3
FDX1
GOLGA5
SPRR2F
IARS1
CNGA1
NIPAL1
ZBTB44
MAIP1
TRAPPC8
DUSP14
MSH3
DHFR
MTRNR2L2
FRA10AC1
PLK2
SNRPD1
GSR
RAB18
ITSN1
CRYZL1
MRPL30
MITD1
TFF1
TFF2
MAGEA11
CCDC174
HTRA2
DQX1
PTPRN2
RNF217
IFNAR1
BCL2L13
ATP6V1E1
POLR2J3
SEC22B
APOBEC3B
BAIAP2
MMEL1
MAST2
FOXO3B
NR1I2
COX6A1
HACD2
SAMD1
C19orf67
DIO2
TNPO3
WBP1
INO80B
NUDT14
BFSP1
BMS1
MED18
CWC25
NEU1
SPAG9
IGFL3
SHOC2
BBIP1
ZNF383
E2F2
TRMO
POMGNT1
LURAP1
ZNF585B
HTR5A
MIPOL1
L2HGDH
DMAC2L
ZBTB33
FAIM
SIT1
CCDC107
ARHGEF39
TAF4
GABRR2
CELSR1
DHX16
PALM
AP1G1
METTL7A
MRPS23
C4B_2
C4B
TNXB
PLCH1
CPD
NT5C3A
ABL1
U2AF1L5
U2AF1
NOS3
INHBE
GLI1
KRR1
PARD3
TATDN2
RBM45
RNF207
RPL22
EIF2D
FAM120B
DLL1
C2orf88
TDP2
ACOT13
TMEM44
LSG1
TMEM79
SMG5
SMG7
ZNRF4
PPIL3
NIF3L1
ZBTB25
ZBTB1
CD2
LRP6
MLPH
SLAIN1
MYLK
SNRPD3
GUCD1
TTC7B
C1orf159
RTTN
VPS52
RPS18
B3GALT4
ELAVL2
RPL5
ZNF790
ARHGAP45
PKP3
RPS3A
PDE1A
LRRC49
THAP10
RPA2
CCDC97
DCT
EVPL
TMEM41A
PRSS16
DYNC1H1
SNIP1
DNALI1
CFHR4
GALNTL5
LBP
MOB4
ENG
ARMC7
FKBP5
MRPS18C
HELQ
ZNF189
MRPL50
KDM5C
TTLL12
FANCC
TAAR5
RNF39
PPP1R11
POLR1H
MACROD1
ALKBH3
TUT1
MTA2
LTN1
SGMS2
FDXACB1
C11orf1
ALG9
SIAH1
GLRA1
ZNF518A
LRRC27
LUC7L2
FMC1-LUC7L2
FMC1
KCNMA1
SKP2
LMBRD2
CDYL
FAM13B
SYF2
FGL2
PDCD6IP
DYRK4
KAZN
NID1
DPYSL2
PNMA2
PACSIN2
TMEM101
CSRNP3
RIF1
ZDHHC6
VTI1A
P2RX2
LRCOL1
FCGR3A
RIOK2
PPP6R1
MAP3K14
REEP3
CCNC
RANBP2
TUBB
MDC1
RUNDC3B
SYT1
ZNF30
ZSCAN25
PRSS21
NCOA7
GSTA4
KRTAP10-9
UBE2D3
CISD2
PES1
TARS3
DCP1A
TIGD2
IFIT1
TMBIM6
POLG
ZNF570
ZNF569
LMLN
IQCG
CYP4F22
TTC39C
ZNF806
TMEM275
UBR2
WDPCP
MDH1
DNM1L
PHGDH
RFFL
THUMPD1
ZC3HAV1
DRG2
DCLRE1B
AP4B1
HLA-C
IRF9
ARMCX5-GPRASP2
ARMCX5
GPRC5C
ZMYND8
SULT2A1
GMEB2
RAB5IF
ARID5B
INSYN2B
LIMS2
DDX43
DSTYK
GTF2H2C_2
GTF2H2C
PLA2R1
TMEM262
TRUB2
COQ4
DHTKD1
SLC18B1
ATG5
GCNT2
SOBP
CSNK1E
PNISR
TOMM20
DOCK3
CLEC18A
POLDIP3
KIF3B
IKZF3
PCDH9
ZNF764
ZNF688
IL36A
KIF12
GORASP2
TIAM1
PCBP3
FAAP20
CCNB1IP1
PARP2
ZNF585A
INO80C
SDR42E1
PDGFD
AARS2
ZNF793
RGS18
MRPS16
CALCB
RXRA
DNAJC9
SLC39A9
ERH
ZFP36L1
DNM2
DAPK3
CYC1
GPAA1
EXOSC4
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
PHC2
LONRF2
OSGEPL1
STX1A
SSH2
EFCAB5
MTBP
MRPL13
RPS13
SLITRK5
LRIG2
SMIM12
POC1B-GALNT4
POC1B
GALNT4
CREB5
PLA2G2A
EFHD2
CFAP20
ADCY10
SLC27A5
LY6L
ZBTB45
TPM3
CLEC18C
FAM124B
C1orf189
RSU1
POM121
WDR36
TAF12
KLHL20
THG1L
ZNF443
CD209
MDM4
ZNF566
TXN2
ZNF841
HBS1L
DUXB
SPSB1
RDX
SNX27
TCTEX1D4
PLK3
BTBD19
CSTF2T
ALG10B
MTOR
SNRPE
HTR7
ARL15
SEMA3D
ZNF292
ZNF546
EDDM3A
CLPTM1
APOC2
KANSL3
FER1L5
NECAP2
SLC39A6
ELP2
METTL8
DCAF17
LOC110384692
C4A
BZW2
CLASP2
TMEM72
FAM89A
TMPRSS12
ADAM21
ZNF230
BRAP
ACAD10
ZNF143
ACTRT3
MYNN
RIPPLY3
HEBP2
GSTP1
NTN1
RMND5A
AJUBA
TBCB
POLR2I
OVOL3
PNPO
PSMD9
HPD
NME4
DECR2
BANP
CAPN11
PGAP6
DCP1B
SHISAL2B
EAPP
RPS14
ZNF302
TYW3
CRYZ
PRRC2B
HTR3A
CTAG1B
CTAG1A
IFI6
NRL
DCAF11
RAB33A
AIFM1
CTSK
TM9SF3
AP2A2
CHID1
CCDC120
DHRS3
NECAB2
ACOX3
FRRS1
TRMT44
TSFM
EEF1AKMT3
BAZ2A
STAC2
ENKUR
SURF2
SURF1
RPL7A
MED22
UTP25
DEDD
SIKE1
PPIG
GGH
RPTOR
MRPL54
APBA3
UBOX5
FASTKD5
MED11
ZMYND15
CXCL16
CDKN1A
CREBL2
STX18
PRIM2
PSMD2
OPN1SW
COIL
CCDC136
VPS45
CC2D2B
ZXDC
NFKBIL1
DDX39B
ATP6V1G2
TPK1
SEC23B
LRRC29
TRIM41
RPL7L1
COL9A3
TXLNB
CDK5RAP1
NR1H3
ACP2
CDIPT
MAEA
RGPD2
RGPD1
CEP120
SUGCT
MPLKIP
RHEB
ARRB2
PELP1
KDM6B
BAHD1
PDCD7
IL21R
GTF2H2
RBM26
TMEM30A
ANKRD13C
CYCS
ZNF317
OPA1
COA6
LRFN3
MXI1