ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX028592 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◣ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

SMYD3
CCDC200
PI4K2B
ZWINT
TSKU
MKLN1
LDHD
ZNF436
OBSCN
ZNF3
BCR
AADACL4
C1orf167
ZNF572
NT5C3A
TATDN2
BRSK2
SUMO3
GAMT
ZSCAN30
ZSCAN31
IRAK2
GORASP2
DBNDD2
TEAD2
DKKL1
IL36A
MAMDC2
ZNF165
KRBA1
ATP5F1B
FAM184A
BAX
UQCRC1
TMEM89
YY1AP1
DAP3
ZSCAN32
ZNF174
THEM4
YPEL3
TBX6
COL18A1
ATP8B2
AQP10
THUMPD1
ST20-MTHFS
TBC1D22A
KCNJ15
F2RL3
WDR74
STX5
GLRA1
ADCY3
SETDB1
PRKAR2B
GTPBP4
CYB5R4
ZNF263
CCL24
CPA2
UBE2F
PRRT1B
ZNF562
CPT2
ZNF708
FN3K
SELENBP1
PER3
DIP2A
GSTM5
SLC30A7
EXTL2
COMT
TXNRD2
IGFALS
GJC3
ZNF341
RBPJ
MON2
CALML3
EXOC3
ENG
ART1
MROH7
CD2
IER3IP1
PRDX6
MAP1LC3B2
SAP130
NARS2
S100A6
S100A5
S100A4
S100A3
SNCG
MMRN2
ZNF169
ZNF777
ZNF550
DTWD2
ZNF792
ZNF627
ESR2
BAAT
TMEM140
SLC27A5
ZNF662
RBM33
APOL4
SAMD9
MRPS16
KIF5C
TOPAZ1
LGALS12
PLAAT5
NCKAP1
LEP
ZNF514
ZNF555
OR4K17
BCL7B
ZNF30
ZNHIT6
BSDC1
MAP3K4
ZNF426
GPRC5C
LMLN
IQCG
PPIG
MBOAT4
DCTN6
SLC1A7
CEP85
TAS2R39
ZSCAN29
TUBGCP4
CDCA7
CYC1
GPAA1
EXOSC4
ZNFX1
IQGAP1
ADCY10
KAT6B
C4B_2
C4B
SAMD7
TNXB
TRIM48
ZNF143
FAM209A
ELAC1
ZBTB26
RABGAP1
EIF4EBP1
ARHGAP39
BPIFB3
SARS2
MRPS12
DLK2
ZNF433
FAM227B
DTWD1
EFCAB10
CYP4F22
MANEA
TMEM44
FEM1C
LZTR1
ZBTB8B
PEX7
FDX1
SNX20
DUX4
EIF4A3
MYOG
ACER2
LMTK2
NOS3
AFAP1L1
DEGS2
BTBD8
ZNF623
VPS13D
TTC7B
ERN2
FEM1B
GPR35
ZNF491
ZNF440
PADI4
GRAMD4
ZNF189
MRPL50
FBXO8
CEP44
PTPRN2
PLA2G1B
CATSPERE
ADSS2
ORC5
FAAH
METTL7A
LBP
ZNF761
TRIM32
ASTN2
IL21R
LONRF2
H4C8
PRSS38
IL22RA2
TMEM62
CANT1
C1QTNF1
ZNF230
SLC28A2
ZNF32
DUXB
ADI1
PSEN1
C2orf88
METTL8
DCAF17
CATIP
CYP17A1
RSF1
AAMDC
DHRS7B
ACSM2B
ZKSCAN3
ANKRD65
MRPL20
TMPRSS12
AUH
ARL2BP
HACD2
CHST3
PRIM1
HSD17B6
TOP3B
SPATA45
CCDC130
COX6A1
APOBEC3B
CTAG1B
CTAG1A
ZNF614
SPIDR
MTRNR2L8
ZNF222
SLC25A23
CRB3
POM121L2
SYT3
ZNF24
PTGER2
C2orf66
PDCD7
VPS37C
TXN2
RAB39B
SCCPDH
ACAA2
TYW3
CRYZ
RSU1
EXOC6
ARL4D
TAS2R41
EHHADH
ZNF134
IFI6
LOC110384692
C4A
MIPOL1
CFAP43
ZNF317
ZNF394
TESC
HS2ST1
ZFP69
LRRC61
ACTR3C
DIRAS1
ZNF878
TCF25
FOLR3
MID1
DIP2B
CHD1L
UBE2D3
CISD2
HERPUD2
ATXN2L
TMC7
UXS1
MSH3
DHFR
MTRNR2L2
RAX2
MATK
RGS18
ACOT2
HEATR4
SEL1L
ZNF441
EFHD2
IFT88
GUCA1B
FKBP9
TACC1
ZDHHC14
TAF12
POLE4
MLLT1
ZNF300
ZNF438
LOC102724770
DGCR6
TMCC3
LCN8
LCN15
LCN6
ACP6
TLE7
FRG2C
SMCO1
WDR33
PDP1
MID2
ITGB3BP
EFCAB7
FAM153B
FRG2
FGD3
CNGA1
PDE11A
GLT6D1
RHOT1
COL23A1
CRP
ANP32D
TTLL1
LMLN2
ADAM21
ZNF117
SHISAL2B
APOC3
APOA1
FAM234B
MYH2
TLR2
RGS21
CYP2C9
COQ9
CIAPIN1
MUC3A
EDF1
CFHR4
ACY3
PIP
C10orf143
FAM193B
BCAR3
B4GALNT4
PDE4DIP
SULT1C3
ZNF527
TMEM229B
ZNF324B
ZNF132
TSPAN5
NKX1-1
INKA2
DDX20
MINDY3
AKR7A3
ST3GAL5
DMXL2
TMEM242
NUF2
YJU2
PPP2R3A
MAPRE2
RBBP5
MTF2
NXPE4
RAB37
SPATA33
PXDNL
PNMA3
C19orf18
IFNAR2
SNX11
CBX1
ZNF83
NOTCH2NLC
YWHAQ
CALCB
TTC30B
NOTCH2NLB
NOTCH2NLA
C2orf69
ZKSCAN7
RABGAP1L
DNAJC25-GNG10
DNAJC25
NARF
CLIC3
DIO2
GBA
RTP5
CAT
POLD1
PSMD8
ARHGAP45
ZBTB44
RPS7
MTRNR2L1
NRARP
GALNT1
PAIP2B
NEMF
DMAP1
MAPK11
SNX16
ZNF556
ZFP30
AURKAIP1
SAMD4B
MRPL55
GMFG
FASTKD1
DUSP6
SF3A3
RPL39L
ACYP2
ZNF501
SSBP1
TEDC1
CRIP1
ABLIM2
RFC1
FRMPD4
CYBC1
TIMELESS
SPACA3
C1GALT1C1L
PNPLA7
MRPL41
SMIM31
CRIP2
COX16
ACBD6
PLA2G4E
LILRA5
FGL2
CLPP
FBXO31
SUPT6H
SDF2
RPL10L
ZNF443
TARS2
SAMD14
SDR42E1
JMJD1C
TBC1D19
CD209
ACOX3
SRPRB
PAXBP1
MAD1L1
NOX5
NCKAP1L
CREBL2
C16orf54
SELENOH
B3GALT2
GPD1L
FRRS1
HAUS5
MACC1
DCP1A
PRKACB
LRIG2
RPS29
SEM1
MYLK
SLC2A7
TMCC1
RNASET2
EPB41L2
COMMD2
MED23
MRLN
MAP3K2
TRIP4
PCLAF
PEX3
ADAT2
EAPP
FRA10AC1
SATB1
TESK2
MMACHC
ZNF487
RPL27
IFI35
OAZ3
HTR5A
SCGB1C2
SCGB1C1
CXCR2
ZNF613
NUDT15
UGT1A10
POU2F1
NFE2L3
B4GALNT3
RBBP9
MRPS33
C3orf14
ZNF594
SPATA13
C1orf159
KIF2C
RPL11
WDR3
TTC32
GDAP2
TDP2
ACOT13
BTN3A3
BORCS7
NBPF1
DSTYK
MOB3A
IZUMO4
NPAS4
CLTB
ZER1
RPGRIP1L
FTO
SUPT7L
SLC4A1AP
TATDN3
NSL1
PIAS2
COLEC11
LUC7L2
REM1
DEFB124
TM9SF2
FKBP11
FMC1-LUC7L2
FMC1
ZNF577
LSS
ZNF502
ACTL8
SMAD1
TMX2
MED19
SLC24A1
TTLL12
ZMPSTE24
MSRA
ODF3
TRMT44
CALD1
THOC5
NOTCH2
MDM4
STX18
TMEM161A
PIN4
NDUFS7
VBP1
TMEM14C
SPATA22
ZNF566
GAS2L3
LRP5L
SEC22B
NME1
SLC38A9
GALK2
TMEM125
SLC33A1
EIF2D
INTS12
GSTCD
ZNF891
ZNF10
LHFPL4
SCAF11
ZC3HAV1
TACO1
TEX50
SLC41A3
SEMA3D
PARK7
RTP3
LTF
ETFBKMT
TMEM262
ITPR2
TBC1D13
PCYOX1
TMEM106C
ASPA
KDM3A
SLC17A5
PGLYRP4
TEFM
TMCO2
RRAGB
SAR1B
ADAMDEC1
TM9SF1
GTDC1
DLAT
ZNF611
LRP5
BRF2
SNAP47
PLK2
RPL37
CARD6
REEP3
LIMS2
LOC100289561
ZNF391
GCNT1
S100A2
RMDN2
NRL
DCAF11
DUSP16
RGPD2
RGPD1
CEACAM21
RERE
MNAT1
CALCRL
PHRF1
MAPK10
LSG1
LARP1
MTERF1
FAF1
REXO4
ADAMTS13
VN1R4
CASP10
CD14
TRMT5
SLC38A6
SMIM12
POLR3B
STX16
RPS14
NTSR2
DRG2
CADM2
KCNMA1
SKP2
LMBRD2
FKBP5
ATP9B
NCOA7
ZNF829
ZNF568
ZNF589
GTF3C3
DHRS2
HMGB1
TMEM41A
GTF2A1L
VARS2
GTF2H4
MOB4
UBE2H
NEU1
ALG10B
DNAJB12
METTL25
CCDC59
POM121
CYP4X1
NDUFV1
ANGEL2
C5orf60
WDR36
TTC26
AIG1
STC1
HLA-E
B3GNTL1
UTP3
INPP4A
PPIP5K2
FABP6
ERV3-1-ZNF117
ERV3-1
BABAM1
TFPI
SERHL2
SPANXB1
LPIN1
DCAF10
CYP46A1
GTF2H2
RTCA
INTS5
GANAB
TMBIM4
DNAJC3
ZNF285
PAFAH2
C10orf99
CASP4
PRDX3
ST6GALNAC6
TEX46
KDM1A
WDR11
FNIP2
POLR2J3
CNIH4
PDCD6IP
MTR
ATL1
CTSF
PDCD2
RNF126
TBC1D14
SRSF7
RTTN
ATP5MC2
NCEH1
VTA1
NMBR
ZNF772
VAMP1
PROKR2
MACROD1
CHMP7
USPL1
TFPT
PRPF31
ALDH7A1
DEK
DPY19L4
COQ8A
PIK3R1
RAB30
DISP1
INO80C
GABPB2
CDYL
POLR2J2
MS4A10
MTERF4
RPIA
MAGEB1
L2HGDH
DMAC2L
TBCK
AIMP1
RWDD2B
MAIP1
RAD54L2
KANSL3
FER1L5
TMEM68
TGS1
STAT3
RPL32
SLC25A51
CCDC150
ZNF350
ALDH3A2
CLEC12A
RUVBL1
NME4
DECR2
IPO4
UBN2
C9orf64
PXDN
CNOT3
CLK4
ATF7IP2
ATF7IP
PUM1
F2RL1
DGKQ
CNOT6
BFSP2
ALKAL1
NPR1
ILF2
TOR1AIP2
TOR1AIP1
SRFBP1
EIF3F
DNAJC6
BANP
PRAMEF1
ADNP
NAXD
FAM120B
DCLRE1B
AP4B1
MRPL44
ATP6V0A1
ACTRT3
KMT2A
SAMD4A
NDUFB3
FAM126B
DNM1L
ZNF408
ARHGAP1
EDNRA
TTYH2
POLDIP3
ATP5MF-PTCD1
ATP5MF
SPATA6
H4C12
H4C11
SLC44A1
NMNAT2
LY6L
BAIAP2
NUP54
TIGD2
TMEM43
CHCHD4
AGL
INPP5F
METTL27
KSR1
AP3B1
SLTM
MRPL30
MITD1
GTF3C5
ZNF680
MRPS31
LIMS1
PPM1K
ZDHHC9
GTF2H2C_2
GTF2H2C
CCNT1
KRTAP5-2
EPRS1
LBR
CDK5RAP1
SGPP1
PLEKHM3
MYO5C
STK19
SPAAR
HRCT1
DXO
RPL30
ARRDC2
CCDC97
SLC45A4
PPP1R3B
NR1H3
ACP2
CEP72
TAAR9
PHB
BDH1
TTI2
AARSD1
SLC35G5
CRELD1
PPP6R1
MRPL40
HIRA
MUC21
ESCO1
ZNF557
CFAP298-TCP10L
CFAP298
ELAPOR1
IFIT1
CAPN11
PTRHD1
CENPO
CDC73
PHGDH
IQSEC3
RCHY1
TMBIM6
MRPL21
IGHMBP2
ZNF582
CLDN4
KLHL41
MTIF2
JMJD4
IQCF2
C11orf49
MRPS18C
HELQ
IL36B
PSMF1
MAP3K19
OR8B3
BAG3
COX7A2
UBE4B
PMF1-BGLAP
PMF1
PRKAG2
OPA1
TULP4
LMBR1L
DNAJB13
BFSP1
BNIP1
TXNL4B
DHX38
MOS
DIS3L2
FAIM
ZNF841
S100A9
SNIP1
DNALI1
LCA5
C10orf53
RCAN1
VPS11
NSFL1C
SNRPB
KRTAP10-7
PDRG1
CCNC
TBL1X
ANK1
STXBP5L
TRIM69
NUDT9
CAMP
MRPL48
PARP15
SBNO1
MYNN
DTX2
ARHGAP19
RNF217
FAM228B
KLRD1
ZBED9
PARP14
TMEM79
SMG5
GFM2
C8orf37
PAAF1
GLIPR1L2
C18orf21
OR1E3
PDXK
PDE6D
COPS7B
SMG8
BMS1
ATR
TTC5
ASNSD1
ASDURF
SRRM3
PRR4
STAM2
OR2L5
USP30
OLFML3
TMEM109
GINS1
HIP1
PES1
SMU1
NSMAF
REN
HGS
ARL16