ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

CSHL1
GH1
ZNF550
FKBP9
MAMDC2
SMCO1
RAB37
ZSCAN32
ZNF174
PI4K2B
SMYD3
LIMK2
KRBA1
NUF2
UBC
KCNJ15
TTLL1
ZSCAN31
WDR74
STX5
ABCC9
ZNF91
FRG2C
CCDC130
MID2
ARHGAP45
PRSS38
MSH3
DHFR
MTRNR2L2
DUX4
ADAMDEC1
HECW2
BTBD8
MMEL1
OBSCN
ZWINT
ZNF514
DCP1A
RERE
LOC102724265
GABARAPL1
ZNF761
HTR5A
NEMF
TTLL12
JDP2
ITGB3BP
EFCAB7
MTRNR2L1
FBXO33
FAM184A
BSDC1
PDP1
ZBTB26
RABGAP1
GBA
DIO2
LCE3B
LCE3A
FRG2
NPAS4
MTRNR2L8
STX16
CADM3
CXCR2
GPR35
SLC24A1
PDE4DIP
EIF4A3
SLC44A1
RGS18
PCDH1
LOC102724770
DGCR6
DEFA6
TEKT5
DRG2
KIF5C
PTPRN2
NXPE4
HTN1
ZNF662
GLT6D1
SGPP1
SLC28A2
PMF1-BGLAP
PMF1
ZNF24
ZNF623
KRTDAP
CYB5R4
ZNF708
ST20-MTHFS
CLDN18
FAM207A
COMMD2
PAX4
TBC1D2B
UGT1A10
FMO4
TSC22D3
NCBP2L
LDHD
SNX20
ZFP30
ZNF134
CCL24
ZNF222
PRR25
GNG13
CHTF18
RPUSD1
PEX3
ADAT2
PARP15
HLA-DRB1
FAM72C
FAM72D
FAM167A
OR2A12
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF76
CADPS
GNAL
APOC3
APOA1
NWD1
ZNF317
ERCC4
DIP2B
FAM209A
CRP
CDT1
APRT
DBNDD2
POLE4
IFIT1B
PADI4
SAP130
TARS2
RAD54L2
RNF217
ZNF230
RTP5
ZNF613
EIF2D
YTHDC2
TRIM9
SLC36A2
SLC44A2
MTF2
GTF2H2
ZNF169
CITED4
TLE7
RMND5B
N4BP3
NOX5
ZNF594
MTNR1B
SSBP1
ZNF670
POU2F1
GTPBP4
IER3IP1
DNAH14
SUB1
ANP32D
FAM227B
DTWD1
MRPL35
IMMT
TMEM229B
RAX2
MATK
WDR33
ZBTB8B
GALK2
ATP1A1
COPS2
ATAD3A
SF3A3
C1orf100
PSMF1
ZNF324B
ZNF132
ACYP2
DOCK3
SLAMF9
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
CDHR1
VWA5B2
COL23A1
GPD1L
CHST3
INTS5
GANAB
NRF1
C2orf88
CD209
PRAMEF1
GSTT4
CABIN1
BCL9
WDR11
TIAM1
SCRT2
PDE7B
DOCK7
CPNE5
ACP6
TM9SF1
IPO4
SAMD4B
GMFG
LMTK2
SRRM3
ZNF501
ZNF502
SMIM17
CNGA3
ZNF433
FGD3
EXOC6
ALG10B
PGBD2
ZNF77
BABAM1
FAM180B
NDUFS3
KBTBD4
PRMT5
FUT8
IRAG2
SPACA3
PRIM1
HSD17B6
NSFL1C
EPB41L4B
MRPL16
DNAJC22
RBBP5
MYLK
TRIM48
PRKCZ
SLC35E3
MUC3A
FAM72A
TRIM29
INTS12
GSTCD
TPM1
DEFB4A
PRDX6
B3GNT9
TRADD
HSF4
FBXL8
IGFALS
FGL2
STX18
METAP1D
FBXO17
MST1R
ATP5F1B
RHOT1
ZNFX1
TRIP4
PCLAF
CCNC
STX6
MFAP3L
FAM178B
BTBD16
DCAF10
FOXO1
MRPL22
GEMIN5
ELF3
TBC1D22A
SLC27A5
AURKAIP1
ZBTB45
ZNF75D
WDFY1
S100P
FAM72B
LTK
VPS13D
NTSR2
LPIN1
ZNF34
B3GALT2
ZZEF1
CYB5D2
DMAP1
NDUFS7
ATP5MC2
TRAM1
RGPD6
RGPD8
RGPD5
TMPRSS12
VMO1
PSMB6
GLTPD2
PLIN1
PEX11A
PDE11A
HMGB1
USPL1
GABPB2
LRRC37A3
P3H3
GNB3
DNAJC25-GNG10
DNAJC25
RPS14
GGH
B4GALT7
TMED9
EEF2K
LRRC59
AADAC
RPL27
IFI35
USP30
SEC13
ANKRD40
ZNF205
LOC388282
ARID3A
TATDN3
NSL1
RGPD2
RGPD1
GTF2H2C_2
GTF2H2C
AKIRIN1
EXD2
SPINK8
DPY19L4
TMEM250
ZNF488
TMEM41A
C10orf88
TVP23B
HMOX1
TEX38
ATPAF1
DRAM1
CPT2
CTAG1B
CTAG1A
TIMELESS
MED23
UIMC1
OPA1
STAT1
NFAT5
NCOA4
MSMB
RPS29
SLC33A1
CHAD
SLC39A13
HERC3
PYURF
PIGY
DEGS2
BCR
ATR
PRELID3B
NEUROD4
DSTYK
PPA2
BARHL1
DHRS2
GTF2A1L
PCP4L1
DYNC1LI2
CCL7
CCL11
OR10G2
MKLN1
JMJD1C
REEP3
TLE2
TLE5
RBBP8NL
LEP
MNAT1
LRP11
LRRC10B
RNF24
CDK5RAP2
ANGPTL6
SHFL
WDR36
MTHFD2L
CCSER2
TUBGCP3
TSPAN14
BCAR3
MRPL3
ANKRD46
LAMA5
SAMD7
PRRG2
NOSIP
HDHD5
PTPRH
TSNAX
AKNA
ELK3
PIP
TOR1AIP2
TOR1AIP1
TMED1
MKRN2OS
MKRN2
SNAPIN
ZNHIT6
TACO1
CYP4X1
SNRPB
PDE4C
CEP135
TPBGL
BRSK2
AKAP13
LHX6
KMT2A
CPLX2
DENND11
ZNF436
REXO4
ADAMTS13
BFSP2
RRP15
RHOT2
RHBDL1
TCF3
TEFM
CCDC150
DRAP1
C11orf68
ZNF226
SPRR2F
SPATC1L
DLG2
COX6A1
SNX11
CBX1
B4GALNT4
PPARD
TNFRSF13B
TRIM16L
ISM1
ZNF829
ZNF568
RNF168
PDP2
POLR2C
ANO6
CCDC200
TMEM259
CNN2
MFAP3
FAM114A2
PPFIBP2
IL10RB
KRTAP10-12
TRMT61B
AGK
CFAP73
BUB1B
ANGPTL4
DYNC1I1
GBP7
DUSP6
SCMH1
SCAMP2
AQR
MPI
ADAM15
C16orf89
ALG1
DHTKD1
TMEM39B
ZNF438
GRPEL2
CPA2
ALDH3A1
WDFY4
LRP2BP
USP17L7
NT5C3A
EIF3F
IMP4
CCDC115
TCF7L2
GRM4
MCPH1
ACAA2
CHD1L
NOTCH2
CDC73
ALKBH3
PRKAB2
PNPO
PRR15L
NUAK2
BRF2
CYREN
SV2A
SF3B4
UQCRC1
TMEM89
PAXBP1
ZER1
FAM53A
MAPK1IP1L
YPEL1
COX5A
ST6GALNAC6
DCLRE1B
AP4B1
GNB2
ZNF354B
EVL
AMBP
CYP2C9
SCCPDH
CRLF3
ATAD5
HUS1
EPS8
FMN1
RNF149
EGFLAM
PPIP5K2
SPSB1
FAM102A
ZMIZ2
DHX8
ANXA11
PDS5A
ZNF527
C2orf66
GTF3C3
ZNF394
FHL3
UTP11
XKR8
STRBP
NME1
TMEM43
CHCHD4
NKAIN4
LAMP1
STX1A
GUSB
TOP3B
IQSEC3
EP400
CXCL6
CREG2
TMPRSS11F
ZNF124
TAFA2
CCDC152
IRAK2
FRG1
SIT1
CCDC107
ARHGEF39
SYAP1
ABRA
MRPL44
SDHAF3
DDX1
CLK3
TACC1
VARS2
GTF2H4
TMA16
ZNF697
DAG1
CIAO3
FAM131B
RPL37
CARD6
INO80C
FAM98B
TFF1
TFF2
CD86
SUPT4H1
UBA52
KRTAP5-6
DPH6
RASSF8
CLEC19A
ZBTB44
POLR2J3
KRTAP10-7
EPB41
CLUAP1
C16orf90
WWOX
CALM1
PRAMEF33
PRAMEF10
KRTAP10-6
NFKB2
RBM39
NRG3
FSHB
OR2F1
LUC7L2
FMC1-LUC7L2
FMC1
ZNF263
CCAR2
C8orf58
GLIPR1L1
CAPS2
NOXO1
RPS2
RNF151
TBL3
WIZ
VSIG10L
USP54
YJU2
IRF9
CTNNB1
TBC1D30
ZNF621
MED12L
PATL2
IGSF9
ASIC2
C19orf18
MDM4
DUS1L
NMNAT1
LZIC
TSPAN10
NPLOC4
RSAD1
SLC35G4
CSAD
ZNF740
IMPA2
MKNK2
NOD2
CBX5
HNRNPA1
C14orf180
BTN3A3
WDR31
BSPRY
ABCA3
PLEC
TOPAZ1
UBE3C
UGT2B4
RPS7
MTERF4
CCDC88B
ATP2C1
TDRD9
ATP5MPL
PSEN2
C10orf95
ZNF555
OR4K17
FAAH
TDP2
ACOT13
ZNF491
ZNF440
TTC26
ZNF286A
COQ10A
ANKRD52
ANKRD2
BLOC1S5
CASKIN1
PGP
BRICD5
P2RY2
FRMD5
HOGA1
SLC25A51
SMARCD2
FUT10
CERS3
PRRC2B
RPL6
PTPN11
JOSD2
ASPDH
RAPH1
SCIMP
DNAAF2
ZMYM3
NPR1
ILF2
PPP6R1
TMEM222
ANKRD36
FXN
FNTB
SNX19
DGKA
FAM162A
CCDC58
PYM1
DPH3P1
C9orf152
NRARP
TTC32
TMEM68
TGS1
EPRS1
GTPBP3
ANO8
ADRM1
NPR3
TNFAIP3
FECH
LPCAT4
ZNF557
ZSCAN22
LUC7L
FAM234A
TBCD
MAEA
CASTOR1
FPR3
SEC22B
C8orf37
GUK1
SELENOT
RILP
TDRD7
SFT2D2
FRAT1
SQSTM1
MGAT4B
EDF1
AKR7A3
SNRPB2
CRLF2
B3GLCT
VWC2L
CFAP36
ZNF619
MAMDC4
DBX1
TGFBR3L
SNAPC2
CTXN1
SRD5A1
NSUN2
CLDN8
MAD1L1
FAF1
TRMT5
SLC38A6
NDUFB3
FAM126B
COG2
CDKN2C
NUDT1
MRM2
FAR1
KMT2C
MYO9B
HAUS8
HOXB9
SUPT7L
SLC4A1AP
KANSL3
FER1L5
FAM71E1
TMEM114
SESN1
CEP57L1
EMC10
CFAP45
LCE4A
C1orf68
LY6L
IL36B
IL36RN
ZNF207
C17orf75
CLN6
CYP51A1
CCDC33
UCKL1
FZD1
EPN1
PLK1
CDK2AP1
TMCO1
DPH7
RASA2
CAPN2
LTB4R
LTB4R2
CIDEB
CARMIL2
EHF
OR13G1
TMEM242
MRPL55
PDCD7
CEP72
VPS13B
MRPS14
FAM86B1
TMEM18
IRF5
FKTN
DIXDC1
NAA60
CRYAB
C11orf52
ARHGAP40
CLEC3B
HSPB2
RNF7
GPIHBP1
NAP1L4
MAPRE2
SMIM31
RBBP9
TMEM161A
SLTM
MRPL21
IGHMBP2
ABR
WDR70
NUP155
SNRPE
SAYSD1
ERI1
SMPD2
PPIL6
RBPJ
LGALS12
PLAAT5
ZNF891
ZNF10
DPP9
LARS2
SLC9A1
DNAJC11
HMGN4
SERPINA3
YIPF2
TIMM29
ZNF721
PIGG
TPR
ODR4
KIAA1549
CGGBP1
C3orf38
TJP3
RNF11
POGK
POLR2H
USP22
ACKR3
CLDN19
ALAS1
NDST2
SLC39A14
THPO
CHRD
ROCK2
CASZ1
ATXN2L
ADAM22
C5orf49
NCF4
ENSA
AGR3
RSU1
FBXO28
CBR3
LAG3
OR2T1
C7orf25
RNF145
P2RY11
EIF3G
GPATCH4
ZNF354C
NAXE
TLCD5
CPNE6
CHAC1
OR11G2
MTR
DISP1
MRPL38
WDR41
SLC27A3
TRIM65
PRELID3A
ZNF197
BPTF
CCDC112
CACNA1S
ASCL5
PAX8
DIPK1C
FAM193B
TBC1D19
SEM1
NCOA7
CYB561D1
AARS2
FAM133B
PLAGL1
CRH
PCBP3
DDX46
ICMT
HES3
RARS1
KDM3B
ZMAT2
HARS2
HARS1
BCL3
SRCIN1
FAM3C
MFSD4B
MKRN3
RGL1
SAMD11
AQP4
AMOTL2
TNFAIP2
PHKG1
HPCAL4
TSKU
UBE2F
PNMA3
FRA10AC1
GTDC1
SLC39A3
DLC1
DNAJB4
ACO1
RABIF
AGAP3
MECOM
ZNF33A
CITED2
SNX18
SLC37A4
ZNF66
NOMO3
ABCC6
CACNA1E
OR4X2
PXDNL
SPATA22
FAM228B
EXOC2
TP53I3
SF3B6
ZNF879
METTL9
CCDC174
MRPL34
ABHD8
TIPARP
NPL
TMEM248
SIKE1
LDLRAD4
DDA1
ADPRHL1
C11orf80
KRTAP12-2