ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190305 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◣ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

WDR74
STX5
EAPP
UBE2H
KRBA1
MKLN1
MOB1B
RHCE
PTPRF
TAF12
TSHZ2
PDZK1IP1
ERMN
PRKAB1
RELN
TANGO2
ARVCF
BSDC1
PARP16
SNAP29
PI4KA
KIF5C
DRC7
RTN4
NFE2
MACC1
RHD
PYCR2
MSH3
DHFR
MTRNR2L2
BTNL10
ABCB10
CPOX
MARCHF2
C1orf167
GYPB
SLC6A9
DCLRE1B
AP4B1
KAT6B
IL13
RNF217
MFSD2B
IL1R1
OBSCN
HNRNPF
AVPR2
BNIP3L
TSKU
GYPE
SMYD3
RAB33A
SLC4A1
SAMD14
SUMO3
ADCY3
MAN2A2
ORAI2
TMEM107
MTRNR2L8
BTG2
TMEM120A
COL18A1
ATF6B
FKBPL
ZNF117
ERV3-1-ZNF117
ERV3-1
PCNT
C21orf58
LIMS1
LEPR
LEPROT
PI4K2B
TRIM67
UBE2F
CYP3A43
PRKAR2B
OR10AC1
OR10V1
GYPA
EPB41
SULT2A1
CASS4
MFAP3L
THEMIS2
POLDIP3
SIRT4
C3orf86
PHF19
GTPBP4
NOS1AP
SPATA46
C1orf226
PGLYRP4
CCM2
ZBTB26
RABGAP1
KIF2C
S100Z
SNX20
FKBP5
DAGLB
ST6GAL1
MTRNR2L9
SERPIND1
FLVCR1
MGAT5
UCP3
CCDC88B
CLCA1
USP21
PPOX
KCNH2
C1orf116
KLF2
DNMT3B
COMMD7
VILL
HDAC6
ELAC1
LMLN2
CEBPE
RPP25
EXOSC9
SLC25A33
LBP
GJC3
GUCA1B
SLFN14
EHD1
CLUL1
TRIM63
MAD2L1BP
GTPBP2
IL36A
KSR1
ANKRD61
TUBA1C
ZNF79
MYOG
RINL
SLC43A3
RNF10
ZNF273
AVEN
LMTK2
KIAA1586
DEGS2
RAPGEF5
HTR4
RGPD2
RGPD1
ZSCAN31
RHAG
TENT5C
GPR182
HAGH
FAHD1
FRMD4A
ZNF77
VWCE
GP9
SMCO1
RNF168
PTPN6
C12orf57
FN3K
TCP11L2
KCNJ15
TPGS1
ZFPM2
ZWINT
SEPTIN5
GP1BB
NUP214
IL18BP
ZDHHC3
EXOSC7
FKBP8
GPRC5C
ZMYND8
ZNF852
C4orf45
ITGA2B
OAZ2
COX6A1
SCMH1
SLC1A7
MRPL35
IMMT
SAMD4A
GDE1
CCP110
SLC29A1
MYMX
MRRF
BCL7B
MINDY4
INMT
PPP1R15A
ZNF451
PLEKHA4
ARHGAP39
ZNF683
THUMPD1
HEMGN
DNAJB2
PRAME
TFDP2
DNAJC6
NUPR2
CHCHD2
MROH7
NPL
CLP1
YPEL4
SVBP
ERMAP
TUBB1
CRYBG1
TOP3B
SDE2
SLC45A3
ZNF474
TBL1X
POM121L2
TMBIM1
CDC42EP1
LDHD
CCDC200
LARP1
STOML3
CLCN3
UBAC1
DNAJB4
TCEANC
COLGALT2
NXF3
NARF
AQP1
HERPUD2
TTI2
PRRT1B
ZFAT
ATP5F1B
ADGRE5
YIF1B
KCNK6
DCP1A
TF
KIF3B
CMIP
BSG
ZNF550
CA1
IL1RL1
TMEM74B
PLCL2
OAZ1
JSRP1
FAM83A
RBBP5
PPP1R14C
TBC1D24
NTN3
LAMB1
FCGR1A
ADNP
UPK1A
METTL7A
ZNF696
LYL1
ZNHIT6
LRRC37A3
MST1
POLD4
ALAS2
SH3BGRL3
ZNF564
DSTYK
SIGLEC12
CHPT1
HDC
TCTEX1D1
ARHGEF12
HSF5
WRN
PURG
FBLN2
CD2
USP4
GPX1
ADAMTSL4
NPAS4
SLC2A1
RAB32
RSF1
AAMDC
SLC25A42
TAL1
TTC26
ADARB1
EEF1A1
SSBP1
YPEL3
TBX6
TREM1
ZNF33B
CCNB3
AKAP4
ST20-MTHFS
ZNF3
LIPC
GBA
TSPAN32
C11orf21
PRDM8
BRSK2
SPTAN1
TNFAIP8
PRKAR1B
FAXDC2
SNAI3
MARK3
GNB1
DHRS3
NDST1
EMILIN2
AQP8
LGALS12
AFAP1L1
STBD1
AIG1
TES
PCSK7
RNF214
AGPAT1
CD59
ZNF777
CANX
STOML2
FAM214B
HDAC11
PPP1R14D
RAP1GAP
ASIC4
TXN2
F2RL3
H2AX
HMBS
GATA1
RPS7
GALNT5
DMAP1
TGIF1
PITHD1
KEL
TP53INP2
ZNF557
FBXO9
CILK1
FAM210B
PACRGL
SEPTIN9
IFT46
ARCN1
ALOX12
CSPP1
COPS5
BIRC2
TBX19
SPRR2A
TFR2
EXOC3
ASIC3
FECH
RCC1
KRT10
GORASP2
CPQ
CCDC91
RPUSD2
CCDC32
RUNX1T1
IL21R
CR1L
ZNF169
PXN
AADACL2
TNFRSF1B
AP1M1
EPRS1
MRPL40
HIRA
TNFAIP3
MTSS2
FAM98C
ZNF347
CSF1
KMT5A
VIL1
C1orf100
ZNF718
ZNF595
CREB3L3
ABCB6
STRIP2
TMEM242
SNX11
CBX1
TEDC1
CRIP1
CRIP2
TMEM191C
TMEM244
EXOC6
ARID3B
NUF2
BCL3
OR52A1
BHLHA15
UROS
BCCIP
NFIB
PHKB
ITFG1
C10orf71
TRMT5
SLC38A6
PTK2B
TRIM35
DGKD
CALML3
CXXC5
UQCRC1
TMEM89
OPN1MW
OPN1MW3
OPN1MW2
PIGV
SELENOH
SLC3A2
ZNF276
VPS9D1
FOXN1
HAPLN2
HDDC2
CSNK1G2
PPARGC1B
MRGPRX1
TMEM262
RAB42
PPM1F
TRIP4
PCLAF
WHAMM
FSD2
NRCAM
LTBP1
HDHD3
SSX2IP
NLRP2
PPIG
NBAS
TMEM9
UTP25
RIPOR3
MTHFR
CLCN6
TXK
SLC2A9
CDCA7
PLSCR2
SLC25A17
TMCC2
EIF2AK1
CORO1C
PDP1
RABGAP1L
EIF1
INPP5B
TTC39A
BLM
ACY3
MED23
CYB561
CPT2
SLC7A8
CHSY1
CIAO3
TMEM94
OR2C1
PEX3
ADAT2
MRPS33
MED18
DOCK7
SLC38A8
MRPS16
DNAJC9
MTF2
SMG8
NPPA
DDR1
NTSR2
H4C4
H2BC6
H3C4
ELMO1
VMP1
PTRH2
ZC3HAV1L
POU2F3
TSPAN33
AADACL4
DDC
FAM110A
PCIF1
ADAMTS14
CD69
ELOF1
YY1AP1
DAP3
TGM1
NOS3
ARRDC2
TMOD1
ABCF3
FAM209A
ZNF438
SSH1
CLCNKB
HTR5A
TMEM248
OR52N2
GPR42
ZBTB33
TGM2
RFX1
TPM4
TATDN2
IBA57
TSPAN17
MPP1
METTL8
DCAF17
NME1
PI16
SPSB1
TIMM10
SMTNL1
CRISP3
IRAK2
DDIT4
MTRNR2L10
INO80C
OR52A5
HK1
HOOK2
SLC5A11
JUNB
RBM28
CNKSR3
SLC37A3
YWHAH
C22orf24
OR4K17
STMP1
CYBRD1
BCAS1
PSMD12
PITPNC1
IFFO1
CCDC71L
GUSB
C2orf88
PEX7
EZH1
RAMP2
RPS9
HECTD3
TEPP
CNGB1
WDR33
SIGLEC14
SPINT2
GALNT10
TMPPE
GLB1
KLHL20
LUC7L2
FMC1-LUC7L2
FMC1
GLRA1
AURKAIP1
OPN1SW
CCDC136
COL1A1
RNF144A
RHEX
GUK1
GJC2
FGFR3
SAMD4B
GMFG
C5AR2
GFI1B
MPZL1
ZNF669
PRPH2
FPR3
LCA5
XKR7
TEX28
C11orf96
SAMD7
GOLGA5
HOMEZ
FOXO3
DCTN2
KIF5A
RBM33
MAGEA11
LUC7L
FAM234A
HERC1
DOCK9
TATDN3
NSL1
PACSIN2
MFSD6
CRYAB
C11orf52
HSPB2
FEM1C
PDCD6IP
MIER1
DNAI4
NSD2
SLC14A1
PDE4B
RAB21
CAB39
RMND5B
LSM12
G6PC3
CTPS1
RAB3IL1
PKHD1L1
SP140
SP110
SLC12A7
PLIN3
SPINK4
CDT1
TLCD4
TLCD4-RWDD3
FOXK2
ZNF510
SAR1B
VMO1
PSMB6
GLTPD2
STX1A
IER3IP1
LPIN1
TRUB2
COQ4
DHH
CDH23
RPS3
VWA7
SKP2
LMBRD2
COQ8A
CCL28
POLR3B
PPP6R1
PTPRH
ASF1A
CDC14A
CDCP1
HEPH
PDE4DIP
SF3A3
INTS12
GSTCD
CYP26A1
MAPRE2
F11R
SPTBN4
WASHC2C
BLVRB
ACVRL1
APOBEC1
FRG1
SACM1L
PAFAH2
ZNF485
DOT1L
CXCL6
ATP6V0A2
UTP3
LY6L
RCL1
CTAG1B
CTAG1A
INTS5
GANAB
UBR2
COX16
ZMPSTE24
TMCO2
OPA1
H2AZ2
GCNT2
SUSD1
SMARCD2
NDUFA4
TEKT2
ADPRS
ARF4
TEAD2
DKKL1
PRXL2B
E2F1
ZNF385A
TBC1D7-LOC100130357
TBC1D7
SLC25A2
PDE11A
RMND5A
RALBP1
PRR5
ZNF562
NDUFS7
H4C12
H4C11
USP48
H2BC14
H2AC14
ELMOD2
COX7A2L
PRKACG
LOC100509620
BROX
AIDA
RCSD1
RHOT1
TSFM
H4C3
H1-6
LRRC8D
TARS2
TEX46
KDM1A
SEC13
ABCC5
SERP2
ZNF708
PRIM2
FAM228B
TP53I3
SF3B6
KIAA1522
SELPLG
ZC3HC1
GABRR2
RHBDD1
KRTCAP3
EIF4A3
CCL24
GALNT1
EIF2D
CTSB
MAP3K8
POLR2E
GPX4
STK11
DRAP1
C11orf68
TRMT2A
RANBP1
RAB27A
POLE4
USP6NL
ZBTB40
KNL1
NFXL1
GYG2
PAF1
MED29
PISD
ZSCAN30
KRT26
KRT25
TMEM259
CNN2
GADD45A
LRRC37A
PRDM11
CCRL2
PTPRN2
PIP
ZNF391
MRPL30
MITD1
CCDC174
BMS1
SKIL
C8orf37
NCLN
FGF13
APOC3
APOA1
ELAVL3
C20orf203
MAD2L2
ASF1B
FBXO6
CD53
MAMDC2
ZNF513
SNX17
EIF2B4
SMIM34A
MMRN1
ABHD15
VIRMA
SLC13A3
ZNF426
TMEM43
CHCHD4
PDRG1
EPS15
BCOR
RAB11FIP1
MYCL
TRIT1
THEM4
MSRA
TRIM7
SPI1
MFSD12
TRIM17
H3-4
PLAC8L1
ST7
TLE2
COMT
TXNRD2
MRPS15
PSAP
DDX42
CCDC47
NME4
DECR2
ZSCAN25
CENPF
SNCG
MMRN2
MAP3K4
DNAJB12
FZR1
TSGA10IP
TFRC
MYL4
P2RX6
TNR
GAD2
GCAT
H1-0
GHRHR
IMPG2
MTRNR2L1
H4C8
MANEA
SLC24A1
SMAP2
CCDC106
U2AF2
NPRL3
HBZ
VTA1
NMBR
ZC3H10
RPL41
ESYT1
EEF2K
WDFY2
DPEP2
DPEP3
NUP210L
DIP2A
ATP5MC2
INTS6L
BPIFB3
MTIF2
NECAP2
RBAK-RBAKDN
RBAK
E2F2
FAT1
SLC25A37
ZHX3
CYP21A2
DPP9
CATSPERE
ADSS2
ZNRD2
FAM89B
EHBP1L1
IL1A
TMEM275
RABEP2
CD19
TXNDC2
KNCN
RPL27
IFI35
POLR2J3
DHTKD1
NUGGC
ELP3
KRT3
IFNAR1
AKR1C1
ZNF436
FAM180B
NDUFS3
KBTBD4
ANO10
SPRED2
ABHD5
NDUFA5
SLC40A1
SPATA32
GDPD5
TMEM79
SMG5
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
TMPRSS3
UBASH3A
ZNF317
POLG
PLXNB3
RNF181
TMEM14B
FAM187B
VAMP5
PADI4
SLC27A5
ZBTB45
HMGN4
RBM8A
LY6G6F-LY6G6D
LY6G6F
ABHD16A
LONRF2
ZSCAN12
KLHL12
ALDH1A2
CREG1
ZNF792
APOBEC3B
TBC1D19
TBC1D14
RHEBL1
KMT2D
NQO2
SPN
LSG1
RNF126
FSTL3
RFX7
TEX9
SMIM12
MRPS18C
HELQ
BPGM
H2AC15
H2BC15
NPR1
ILF2
TOR1AIP2
TOR1AIP1
GTF2B
ZDHHC14
WDR70
NUP155
MEF2C
CENPC
STAP1
ATP2C1