ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945293 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◣ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
MAMDC2
PI4K2B
KCNJ15
DUX4
SNCG
MMRN2
FRG2C
LDHD
THEM4
GLT6D1
ZWINT
ST20-MTHFS
SMYD3
ZBTB8B
EIF4A3
EIF4EBP1
TATDN2
MANEA
FAM234B
AADACL4
SHISAL2B
CYP2C9
PDP1
ATP5F1B
LMLN2
NKX1-1
ZNF143
BPIFB3
UQCRC1
TMEM89
LGALS12
PLAAT5
SNX16
IRAK2
FAAH
ZNF708
SULT1C3
BCAR3
ZNHIT6
MYH2
MID2
ABLIM2
PTGER2
COQ9
CIAPIN1
CNGA1
ADAM21
LOC102724770
DGCR6
FAM209A
RHOT1
DMXL2
ZNF30
TACC1
RGS18
ACP6
LEP
CALD1
SARS2
MRPS12
C2orf66
FRG2
CFHR4
PPP2R3A
YPEL3
TBX6
ACYP2
SPANXB1
TTC7B
FAM184A
ZNF562
TMEM14C
CRP
RGS21
OR4K17
CDCA7
GRAMD4
TMEM229B
CALCB
MUC3A
COX6A1
ZBTB44
AKAP10
DBNDD2
RBPJ
PXDNL
ACSM2B
B4GALNT4
MAGEB1
WDR33
PDE11A
PAIP2B
THUMPD1
BAG3
COL23A1
TTLL1
BTN3A3
F2RL3
SPATA33
TEAD2
DKKL1
GSTM5
ACAA2
ZNF24
LMLN
IQCG
MON2
CYP17A1
BAAT
DIP2A
PADI4
LSS
RPL10L
PIP
MINDY3
CYP46A1
FEM1C
CASP4
FDX1
FAM227B
DTWD1
PHRF1
C10orf53
GPR82
RTP5
SUPT6H
SDF2
ZNFX1
SLC27A5
ANP32D
UBE2F
COMT
TXNRD2
TMCC3
ZNF433
SAP130
FAM193B
LILRA5
OR5K3
CPM
ZSCAN30
ZNF611
CD200R1L
CDK2AP1
MRPS16
CNOT3
IFT88
DPH2
ATP6V0B
DIO2
ALKAL1
SLC30A7
EXTL2
ATP9B
PIAS2
TMEM242
BRSK2
C10orf143
TCEAL4
ZNF550
APOL4
TEDC1
CRIP1
CRIP2
DNM1L
SCCPDH
NOX5
SMCO1
ADI1
FAM47A
PDE4DIP
UGT1A4
UGT1A3
FRMPD4
FGD3
TNFRSF6B
ZKSCAN7
C2orf88
IL22RA2
TSKU
TIMELESS
CADM2
GTF2A1L
SLC22A25
CPT2
EDF1
HACD2
CERS5
SMIM31
FRRS1
CASP10
MBOAT4
DCTN6
CTSF
EML5
TLR2
OR10X1
CEP85
LIPG
TMCC1
ZNF589
CAMP
ZNF117
ACER2
EFCAB10
GCNT1
GIMAP4
NLRP2B
ZNF527
DGKQ
HAUS5
PNPLA7
MRPL41
TAS2R39
NOS3
ELAC1
DNAJC3
SLC28A2
LRIG2
ZNF487
GTF3C5
ZNF792
MOB3A
IZUMO4
ZNF841
KCNMA1
OR2L5
ESR2
ADH1B
PSMD8
TBC1D22A
PRDX6
POLD1
WDR3
GDAP2
EDNRA
NUDT9
VBP1
RSU1
CD209
ACOX3
SATB1
TRMT44
ANGEL2
CATIP
SPRR2F
VN1R1
IFIT1
NRL
DCAF11
MROH2B
ZNF280D
ART1
ACSM2A
GTPBP4
MAPK11
STAM2
CLPP
FABP6
ZNF285
RUVBL1
BCR
PUS1
NCKAP1L
IER3IP1
BTBD8
HP
PDCD7
SEC22B
SEM1
C3orf14
NSUN7
GPR35
CLIC3
TXN2
ORAI1
MKLN1
ZNF486
TMEM62
PEX7
ITGB3BP
EFCAB7
GAS2L3
SERHL2
RTCA
CRELD1
TXNL4B
DHX38
POLR2J2
PLAAT1
RXYLT1
RBMXL2
PPIG
FASTKD1
IGFALS
FOLR3
CD2
PLEKHA5
ACY3
TSPAN5
PCYOX1
PRR4
TEX50
ZNF83
C1GALT1C1L
NETO2
TCF4
ARHGAP45
DLAT
CYP4X1
FAM120B
NARF
CYBC1
CCDC200
MRLN
PLG
C1QC
C1QA
ST3GAL5
OR2AP1
RFC1
GPD1L
ACOT2
HEATR4
SLC52A3
VKORC1
BCKDK
CDC34
FBLN2
TMEM106C
PTCH1
ERN2
CPA1
NXPE4
HSD17B4
TTC30B
PHB
GORASP2
ZNF324B
ZNF132
CEACAM21
ZDHHC9
DUSP16
MIF
ARL17B
MAP3K4
PTGES2
ZER1
TBC1D13
TAAR9
CCN6
CYB5R4
ADCY10
SRD5A3
UGT1A10
UBN2
ZNF627
IFNA5
BTNL9
C5orf60
PPM1K
MPHOSPH8
THAP11
NUTF2
CENPT
CCL24
F2RL1
N4BP2L2
NFE2L3
TMEM125
MIPOL1
ZSCAN32
ZNF174
TFPI
PRSS38
PER3
IFNAR2
METTL8
DCAF17
S100A2
OR8B3
PTPDC1
C10orf99
CLCN5
VTCN1
RAD54L
MRPS36
PNMA3
ZNF761
ALDH7A1
EIF1
ZNF582
ZNF583
SET
PDGFRL
CAPN8
SFTPD
PBX1
CTAG1B
CTAG1A
HSD17B11
MLLT1
MOGAT2
SCGB1C2
SCGB1C1
ODF3
PROKR2
MTERF1
KIF2C
MACROH2A1
RNF148
RNF133
MYLK
OBSCN
ZNF436
BSDC1
KRBA1
WDR74
ZSCAN31
STX5
MTRNR2L8
MSH3
DHFR
ZBTB26
RABGAP1
ZNF555
APOC3
APOA1
MTRNR2L2
DEGS2
PTPRN2
ZNF3
ZNF572
APOBEC3B
ZNF134
SUMO3
VPS13D
INKA2
DDX20
KAT6B
AKR7A3
ZNF514
NT5C3A
NUF2
YJU2
SELENBP1
MAPRE2
RBBP5
MTF2
RAB37
SLC1A7
COL18A1
ZNF426
C19orf18
SNX11
CBX1
NOTCH2NLC
YWHAQ
SNX20
NOTCH2NLB
NOTCH2NLA
C2orf69
RABGAP1L
ARHGAP39
DNAJC25-GNG10
DNAJC25
GBA
CAT
YY1AP1
DAP3
GPRC5C
METTL7A
RPS7
MTRNR2L1
NRARP
GALNT1
MROH7
NEMF
DIP2B
LBP
DMAP1
ZNF556
ZFP30
AURKAIP1
SAMD4B
MRPL55
GMFG
UBE2D3
DUSP6
SF3A3
RPL39L
CISD2
ZNF501
ZNF623
IFI6
SSBP1
EXOC6
ZNF662
ZNF165
TMPRSS12
SPACA3
COX16
LCN8
ACBD6
PLA2G4E
LMTK2
FGL2
RBM33
FBXO31
ZNF443
TARS2
LCN15
SAMD14
SDR42E1
TYW3
CRYZ
C4B_2
C4B
JMJD1C
TBC1D19
SRPRB
PAXBP1
MAD1L1
CREBL2
C16orf54
CHD1L
SELENOH
B3GALT2
MACC1
DCP1A
PRKACB
RPS29
CCDC130
PRRT1B
SLC2A7
RNASET2
ZNF878
EPB41L2
COMMD2
MED23
MAP3K2
TRIP4
PCLAF
PEX3
ADAT2
EAPP
FRA10AC1
TESK2
MMACHC
BAX
RPL27
IFI35
MYOG
OAZ3
HTR5A
CXCR2
ZNF613
ZNF341
NUDT15
POU2F1
CANT1
B4GALNT3
RBBP9
MRPS33
ZNF594
SPATA13
ARL4D
C1orf159
RPL11
TTC32
TDP2
ACOT13
BORCS7
NBPF1
DSTYK
NPAS4
CLTB
LOC110384692
C4A
RPGRIP1L
FTO
SUPT7L
SLC4A1AP
TATDN3
NSL1
COLEC11
LUC7L2
REM1
DEFB124
FKBP9
TM9SF2
FKBP11
FMC1-LUC7L2
FMC1
ZNF577
ZNF502
ACTL8
SMAD1
TMX2
MED19
SLC24A1
TTLL12
ZMPSTE24
MSRA
FN3K
THOC5
NOTCH2
MDM4
STX18
TMEM161A
PIN4
NDUFS7
ZNF614
SPATA22
ZNF566
LRP5L
GJC3
NME1
GLRA1
SLC38A9
GALK2
SLC33A1
EIF2D
INTS12
GSTCD
ZNF891
ZNF10
LHFPL4
SCAF11
ZC3HAV1
TACO1
SLC41A3
SEMA3D
PARK7
TMEM44
CHST3
RTP3
LTF
ETFBKMT
TMEM262
ITPR2
FEM1B
ZNF32
ASPA
KDM3A
LCN6
SLC17A5
PGLYRP4
TEFM
TMCO2
RRAGB
SAR1B
VPS37C
ADAMDEC1
TM9SF1
GTDC1
LRP5
BRF2
SNAP47
PLK2
RPL37
CARD6
REEP3
LIMS2
LOC100289561
ZNF391
KIF5C
RMDN2
CYC1
RGPD2
RGPD1
NARS2
RERE
MNAT1
CALCRL
MAPK10
LSG1
LARP1
FAF1
REXO4
ADAMTS13
VN1R4
CD14
ZNF491
TRMT5
SLC38A6
SMIM12
POLR3B
STX16
RPS14
NTSR2
DRG2
SKP2
LMBRD2
FKBP5
IL21R
NCOA7
ZNF829
ZNF568
GTF3C3
DHRS2
HMGB1
TMEM41A
VARS2
GTF2H4
MOB4
UBE2H
PRIM1
NEU1
HSD17B6
ALG10B
DNAJB12
ZNF440
METTL25
CCDC59
POM121
SAMD7
NDUFV1
PSEN1
WDR36
TTC26
AIG1
STC1
HLA-E
B3GNTL1
UTP3
INPP4A
PPIP5K2
ERV3-1-ZNF117
ERV3-1
BABAM1
LPIN1
DCAF10
GTF2H2
INTS5
GANAB
TMBIM4
PAFAH2
PRDX3
ST6GALNAC6
GPAA1
EXOSC4
TEX46
KDM1A
WDR11
ZNF300
FNIP2
POLR2J3
CNIH4
ZKSCAN3
RSF1
PDCD6IP
AAMDC
MTR
ATL1
ZNF317
PDCD2
RNF126
TBC1D14
SRSF7
RTTN
ATP5MC2
NCEH1
TOP3B
VTA1
NMBR
ZNF772
VAMP1
MACROD1
CHMP7
USPL1
TFPT
PRPF31
DEK
POLE4
DPY19L4
COQ8A
PIK3R1
RAB30
DISP1
INO80C
GABPB2
CDYL
MS4A10
MTERF4
RPIA
L2HGDH
DMAC2L
TBCK
AIMP1
RWDD2B
MAIP1
RAD54L2
KANSL3
FER1L5
TMEM68
TGS1
STAT3
RPL32
SLC25A51
CCDC150
ZNF350
ALDH3A2
CLEC12A
C1QTNF1
NME4
DECR2
IPO4
C9orf64
PXDN
ZSCAN29
TUBGCP4
TAF12
CLK4
ATF7IP2
ATF7IP
PUM1
CNOT6
BFSP2
NPR1
ILF2
TOR1AIP2
TOR1AIP1
SRFBP1
EIF3F
DNAJC6
BANP
PRAMEF1
ZNF441
ADNP
NAXD
DCLRE1B
AP4B1
MRPL44
ATP6V0A1
PRKAR2B
ACTRT3
ENG
KMT2A
SAMD4A
NDUFB3
FAM126B
ZNF408
ARHGAP1
TTYH2
TLE7
POLDIP3
ZNF222
ATP5MF-PTCD1
ATP5MF
SPATA6
H4C12
H4C11
SLC44A1
NMNAT2
LY6L
BAIAP2
NUP54
TIGD2
EFHD2
TMEM43
CHCHD4
AGL
INPP5F
ADCY3
METTL27
KSR1
AP3B1
SLTM
MRPL30
MITD1
ZNF680
MRPS31
LIMS1
GTF2H2C_2
GTF2H2C
CCNT1
KRTAP5-2
EPRS1
LBR
CDK5RAP1
SGPP1
PLEKHM3
MYO5C
STK19
SPAAR
HRCT1
DXO
RPL30
IQGAP1
ARRDC2
CCDC97
SLC45A4
PPP1R3B
NR1H3
ACP2
CEP72
HERPUD2
BDH1
TTI2
AARSD1
SLC35G5
PPP6R1
MRPL40
HIRA
MUC21
ESCO1
ZNF557
CFAP298-TCP10L
CFAP298
ELAPOR1
CAPN11
PTRHD1
CENPO
CDC73
PHGDH
IQSEC3
RCHY1
TMBIM6
MRPL21
IGHMBP2
CYP4F22
CLDN4
KLHL41
MTIF2
JMJD4
PLA2G1B
IQCF2
C11orf49
MRPS18C
HELQ
IL36B
PSMF1
MAP3K19
COX7A2
H4C8
UBE4B
PMF1-BGLAP
PMF1
ORC5
PRKAG2
OPA1
TULP4
LMBR1L
DNAJB13
BFSP1
BNIP1
MOS
DIS3L2
FAIM
S100A9
SNIP1
DNALI1
IL36A
LCA5
RCAN1
VPS11
NSFL1C
SNRPB
KRTAP10-7
PDRG1
CCNC
TBL1X
ANK1
STXBP5L
TRIM69
MRPL48
PARP15
SBNO1
MYNN
DTX2
TNXB
ARHGAP19
RNF217
FAM228B
KLRD1
ZBED9
PARP14
TMEM79
SMG5
GFM2
C8orf37
PAAF1
GLIPR1L2
C18orf21
OR1E3
PDXK
PDE6D
COPS7B
SMG8
BMS1
ATR
TTC5
ASNSD1
ASDURF
SRRM3
USP30
OLFML3
TMEM109