ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX391683 | CD34 Hematopoietic stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◣ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

HTR5A
CYB5R4
PLA2G4E
RAB37
ZWINT
ZNHIT6
C2orf66
GTF3C3
PDE11A
MANEA
CNGA1
KCNJ1
DMAP1
BPIFB3
CAPN11
COX6A1
C3orf14
NUF2
OR4K17
FRA10AC1
PDP1
RGS21
TBC1D19
INTS12
GSTCD
IQSEC3
IER3IP1
FRMPD4
WDR33
HTR4
KCNH1
MED23
SPX
NUP42
SRRM3
TOP3B
XKR7
SKP2
LMBRD2
KCNJ15
TTC30B
MRPL44
DBNDD2
EIF2D
ZBTB8B
UBE2H
TMEM262
LBP
FAM209A
APOC3
APOA1
PI4K2B
RBBP9
ANK1
RAD54L2
PPIAL4F
PPIAL4E
PPIAL4D
COQ9
CIAPIN1
SHISAL2B
SMIM12
FOXN1
PGLYRP4
S100A9
CASS4
SLC30A7
EXTL2
COX16
PEX7
NPAS4
PUM1
AADACL4
BTBD8
ADAM21
MAP3K13
P2RY4
ARR3
CPLX2
MRPS31
KIAA1549
MRPL21
IGHMBP2
RPS7
PLEKHM3
USP30
BSDC1
ICMT
HES3
DCAF10
RBBP5
FGF1
BACH2
TRIP4
PCLAF
TMEM242
BARX1
MINDY3
ALG10B
PEX3
ADAT2
AKR7A3
MTERF4
MTF2
SELENOH
BTBD18
STAC
GDPGP1
CIB1
PIP
CCL24
YJU2
ADCY10
INKA2
DDX20
ELOVL2
CDCA7
SAR1B
PANX1
SEC13
DIP2B
SULT1C3
LDHD
MNAT1
SMIM17
ZBTB26
RABGAP1
SNCG
MMRN2
BNIP1
METTL8
DCAF17
AURKAIP1
COMMD2
NUDT15
FAM234B
MYH2
GLRA1
R3HCC1
DRG2
RPL37
CARD6
NCKAP1L
FAM98B
PER3
YWHAQ
OR2L5
SPATA22
ASPA
TM9SF1
IPO4
CDK5RAP1
DTX2
GLT6D1
DEGS2
DUS1L
DMXL2
GPRC5C
TPD52L1
TGFBR2
DCP1A
GTF2H2
TCF7L2
DLC1
GAS2L3
CEP72
VBP1
CADM3
TACO1
DPY19L4
C16orf74
SEMA4F
M1AP
B4GALNT4
TTC4
OR14I1
MAPK11
CLCA1
BFSP2
CPT2
XKR4
GTF2H2C_2
GTF2H2C
PIP4P2
NT5C3A
PLEKHN1
PERM1
CHGB
CRP
F10
VSTM1
THUMPD1
NEMF
N4BP2L2
CTAG1B
CTAG1A
PRSS22
TEDC1
CRIP1
CRIP2
PROKR2
CUL5
ZNF391
TMEM222
LRRC61
ACTR3C
CRH
FGL2
NRARP
POLR3B
PNMA3
PADI4
ZNF443
PXDN
SNX11
CBX1
RABEP1
LSG1
SLC37A2
GFM2
BRPF3
STX18
LILRA4
TEAD2
DKKL1
TTC32
DUSP9
ZNF550
SLC28A2
ACER2
TYW3
CRYZ
KIF22
ZG16
SNAP25
METTL15
KIF18A
RPGRIP1L
FTO
RPL39L
VTA1
NMBR
OBSCN
ATR
FAM24A
SAMD4A
SMYD3
RGS18
SLC24A1
LHFPL4
ZNF143
MAP3K4
CLEC18C
PALM3
FAM227B
DTWD1
YAP1
CAMK1D
EIF4A3
GSTM5
TEFM
ACSL6
CCDC130
ZNF83
SSBP1
NXPE4
OR10X1
DNAJC6
CASC3
RPL27
IFI35
NEGR1
PDE6D
COPS7B
SMAD1
ALKBH3
FAM160B1
PRELID3B
ATP5F1E
EIF4EBP1
STEAP1B
SMU1
PLK2
ZNF207
C17orf75
ZNF770
OPA1
PXK
SLC44A1
IQGAP1
PADI1
SDR42E1
B4GALNT3
OR5A2
PVRIG
CYRIA
SPAAR
HRCT1
TSFM
EEF1AKMT3
SFT2D3
MRPL39
GDPD5
SCGN
FAM193B
GBA
FEM1C
VPS13D
OPRM1
RPL10L
HMGB1
USPL1
KLF14
BAAT
SLTM
SNAP47
CRELD1
JMJD4
CPNE4
FBXO38
SIGLEC10
NAXD
PRPF18
ADRM1
TMEM229B
SLC8A1
ZNF117
CCDC88A
ALG10
NMNAT1
LZIC
SCCPDH
PAFAH2
PPP6C
TSPAN5
RHOT2
RHBDL1
PRR23D2
PRR23D1
CLK4
PDE1C
ZBTB44
POM121
ZMPSTE24
TMCO2
KANSL3
FER1L5
TDP2
ACOT13
TPM1
RPS20
NDUFS7
KSR1
MRPL3
THSD7A
LMLN
IQCG
ACOX3
TRMT44
POLE4
FSIP2
PPP1R3C
AKAIN1
MID2
RTTN
EPS8
STX16
ITGB3BP
EFCAB7
INSM2
SLC25A51
PIN4
CALB1
TMEM41A
TMCC3
B4GALT7
TMED9
SMCO1
CLIC3
FEM1B
NR1H3
ACP2
SLITRK1
GNAL
AKAP12
SAP130
B3GALT2
DSTYK
RMDN2
HGS
ARL16
OXLD1
CCDC137
TPST2
PSMF1
KLHL30
JMJD1C
REEP3
RPS14
LARS2
FDX1
ANGEL1
CTNNB1
GPR35
ST6GALNAC6
BMS1
SCG3
CAMK2G
R3HDM2
GRIA2
TRMT5
SLC38A6
EEA1
CERS3
FKBP11
NME1
CCDC97
TTLL1
TGM1
TMEM114
RABGGTA
DNAJC24
DCDC1
UQCRC1
TMEM89
PTGER2
TNPO2
EIF3E
CYRIB
VWA8
SPATA33
NTSR2
LPIN1
CLVS1
HOPX
CSGALNACT1
GPR78
C10orf143
MKLN1
GLIPR1L1
CAPS2
STN1
NOXA1
TCP11L1
ERCC6L2
OR56A5
RFC1
SF3A3
PDHB
MMP7
NUP54
DRAP1
C11orf68
METTL9
GJD3
TXNL4B
DHX38
NXPH3
CLPP
WDR31
BSPRY
C2orf88
OR1E3
FRG1
GAS7
MAP3K2
RPS29
VMO1
PSMB6
GLTPD2
MAN2C1
PPIP5K2
TARS2
WDR27
C6orf120
MEX3C
DNAJC25-GNG10
DNAJC25
SLC16A2
LBH
GTF2A1L
SKOR2
COQ2
ATP6V0C
HNRNPA1L2
MED4
SAMD4B
GMFG
SELENBP1
ATP10D
ATP5F1B
HERPUD2
AADACL2
RPLP1
RAP2C
MRPL40
HIRA
KLRD1
CLEC18A
FAM86B1
INO80C
MTMR6
NEFH
PRAMEF1
ITGA4
IRAK2
FAM184A
MOB3A
IZUMO4
SUGT1
ZNF24
DERA
NCEH1
GINS1
LOC100289561
UTS2B
CCDC50
POLD1
AFAP1
DAB2IP
EXOC6
VAMP1
AAR2
PSRC1
BAIAP2
SREK1IP1
CWC27
ZFPM2
ADAMTS7
CD2
HUS1
CBWD5
CBWD3
CBWD6
WDFY1
SYTL4
NPIPB9
GGACT
CPA6
APOBEC3B
PRUNE2
DUSP6
MARCHF4
PSMD8
STOML2
FAM214B
PIGO
FAM53A
APOL4
C11orf49
LEP
PRIM1
HSD17B6
NECAP2
ST20-MTHFS
TMED1
DLGAP4
EXOC2
TACC1
MRLN
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
PPM1H
CHST3
ZNF579
UBE2F
TTC26
TBC1D22A
DDX18
MAP3K19
MNDA
NCOA7
SPATA6
FAM207A
PXDNL
ZNF296
GEMIN7
TMEM62
DISC1
FGFBP3
ASF1A
ACAA2
RTP3
LTF
MOB4
TMEM68
TGS1
DGKZ
F2RL3
ZNF761
WDR36
HRH4
TMX2
MED19
GTDC1
SMIM13
SLC38A9
CTHRC1
STAT1
PPP1R14C
CHMP7
ZNF26
LAMTOR1
RNF6
YBEY
MCM3AP
NDUFC2-KCTD14
NDUFC2
GOLIM4
PDCD6IP
TSPAN10
NPLOC4
NDUFA4
MFSD1
MS4A12
EIF5A2
ACTB
ADNP
EDN1
TLR2
RUVBL1
CYP2C9
CPEB4
COMT
TXNRD2
CYB561D1
ATXN7L2
PLCL2
TRDMT1
TFPT
PRPF31
ITGA7
BLOC1S1
TVP23B
ANKRD46
HOXC6
HOXC5
SNRPB
ALDH3A1
POLR1F
POU2F1
TM9SF2
FUT10
NEUROD1
NMNAT2
ALDH1L2
MRPS14
RPS5
PLEC
CLEC18B
FGD3
METTL27
CLDN4
DDX1
ANKRD40
ZNF829
ZNF568
MRPL30
MITD1
SYN3
NSMAF
FAM133B
BZW2
SURF2
SURF1
RPL7A
MED22
AQP2
TGM6
ANKMY2
SESN1
CEP57L1
DHX32
CA2
FAM221A
ZNF627
SNX19
DNAJC3
DIS3L2
GLIPR1L2
AGK
PHF21A
SECISBP2L
ZNF212
CDKN2AIPNL
IL22RA2
TDG
C12orf73
GPT2
EIF2B3
IL4R
PARK7
ZFP30
POLR3E
TNFAIP8L1
CTRL
BZW1
GBP4
PSMB10
RARG
MAPK1IP1L
TATDN2
TOR1AIP2
TOR1AIP1
TRAM1
HPSE2
FKBP9
RHOT1
PDE4C
HMOX2
NMRAL1
NBEA
MAB21L1
SC5D
PDE7B
TBCK
AIMP1
KDM3B
OAZ3
THEM4
MRPS16
GARS1
SCAMP2
ACSF3
SAAL1
C4B_2
C4B
LOC110384692
C4A
STK19
DXO
RPL5
SNX20
ZBTB40
DPH2
ATP6V0B
HACD2
KLHL20
RICTOR
L1CAM
LUC7L2
FMC1-LUC7L2
FMC1
SLC35A3
WDR11
ARL8B
NCBP3
OTUD7A
EMC8
COX4I1
NNT
ANKRD18B
DHRS7
TMEM202
A2M
METAP1D
RFX7
TEX9
PIK3CB
DGKQ
AARS2
CXCL2
LGR5
VIRMA
CBWD1
NPIPB6
MRPL58
BIN2
SLC41A3
SEMA3D
KNL1
CD58
ABR
PPM1M
GPD1L
STAT3
PRMT3
ARHGAP42
TMEM255A
SNRK
CENPV
MRPL16
PPP2R5B
ATG2A
KCTD6
ATP5MC2
ZNF34
LCP2
BTG3
PCSK1
ZNF426
TTLL12
POMP
DLGAP3
GASK1A
TAMM41
SLC35G5
DDC
EPHA3
PET117
KAT14
SLC1A7
MRPL22
GEMIN5
LIPA
TPM3
POLR2J3
ASNS
SNAPC3
EPM2A
NBN
ZSCAN12
RAP1GAP
CDC73
GOT2
C5orf60
C10orf99
OR10J1
TOMM20L
BTN3A2
GJB2
FOXN3
ANKAR
ZNF501
TAB1
PRDX3
PLCD3
ACBD4
GPR3
CD164L2
NXPE3
CEP85
CYC1
METTL25
CCDC59
PSEN1
GPAA1
EXOSC4
CRBN
ZER1
SPRN
SMTNL2
PNPLA7
MRPL41
TARBP2
NPFF
MAP3K12
ACOT2
ZNF609
SMAD5
PHTF2
TMEM60
MRPS18C
HELQ
TRAF6
RAG1
MSMO1
COLEC11
MAOA
EEFSEC
PTRHD1
CENPO
EIF1AD
CST6
BANF1
RHEBL1
KMT2D
MARS2
TANGO2
ARVCF
PPIAL4C
PPIAL4A
ZNF324B
ZNF132
NKX1-1
SCAF11
EML5
PHYHIP
POLR3D
C2orf69
GTPBP4
ACY3
FHL3
STXBP3
TINF2
GMPR2
NEDD8-MDP1
NEDD8
TNXB
C10orf88
HLA-A
CD86
PHGDH
ZNF114
MTPN
LUZP6
PRSS38
METTL7A
RPS6KB2
PTPRCAP
CORO1B
MAPRE2
COL9A2
SVOP
CCNF
ATF7IP2
CNOT6
SNRPB2
NPIPA3
NPIPA2
PLA2G10
MTIF2
BCL9
PTPN21
ISM1
RNASE10
MTA1
WDR24
JMJD8
STUB1
OR5AN1
LOC100509620
CACNA1G
CYP17A1
CD47
WDR41
ZNF708
FOXJ3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UTP3
CCDC92B
COL18A1
SERHL2
TDRD7
ZNF433
RPL11
C8orf37
LIN28A
TOX2
ZNF527
COA6
TMTC2
CXCL3
UGT1A10
THOC5
AGO1
BRF2
PFN3
F12
ZFP41
EPB41L2
INTS5
GANAB
CDH5
TIGD2
VANGL2
PPP2R3A
RHBG
NPR1
ILF2
TMEM70
ELOC
EPS15
DUSP16
NFAT5
SPEF2
ARAP1
PSMA3
SDHAF3
LSM5
AVL9
RPS15
LGALS2
ZC3HC1
SORBS1
ARHGAP32
CHCHD6
ANKRD34C
BCR
CFAP298-TCP10L
CFAP298
C17orf50
PPIAL4H
PPIAL4G
TSKU
TMEM106C
NME4
DECR2
ZNF280D
PGAP6
VPS72
PIP5K1A
SPDYA
MTERF1
SLC7A6