ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150543 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◣ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

ZNF280A
ZNF436
SMYD3
MKLN1
BRSK2
LDHD
OBSCN
TSKU
ZNF572
ZNF3
CCDC200
ZWINT
TATDN2
ZSCAN31
PI4K2B
SUMO3
GORASP2
AADACL4
IL36A
RBM33
C1orf167
CPA2
MAMDC2
KRBA1
ZNF556
F2RL3
ATP5F1B
ZNF165
PRKAR2B
ST20-MTHFS
ATP8B2
AQP10
GAMT
THUMPD1
ZNF555
BCR
UQCRC1
TMEM89
ZNF792
THEM4
ZNF433
ZNF878
IL21R
GLRA1
EIF4EBP1
GTPBP4
GJC3
KCNJ15
COMT
TXNRD2
SETDB1
ZNF514
FN3K
EXOC3
IRAK2
ZSCAN32
ZNF174
ZNF32
ADCY3
FAM184A
ZSCAN29
TUBGCP4
NARS2
ZNF623
YPEL3
TBX6
DTWD2
CCL24
WDR74
STX5
ZNF614
ZNF708
SNCG
MMRN2
YY1AP1
DAP3
ART1
ELAC1
TEAD2
DKKL1
ZBTB8B
SAMD9
DBNDD2
COL18A1
MROH7
LONRF2
MON2
LMTK2
ZNF491
ZNF440
GSTM5
SELENBP1
B3GNTL1
TBC1D22A
ZNF169
NT5C3A
CYB5R4
PPIG
FASTKD1
KAT6B
LGALS12
PLAAT5
MAP1LC3B2
MBOAT4
DCTN6
CD2
UBE2F
TMEM44
MYOG
ZNF441
POM121L2
DIP2A
TAS2R39
PRRT1B
ZNF134
CPT2
SAMD7
ARHGAP39
ZNF501
ZNF502
TMEM140
CEP85
ZNF222
IL22RA2
AFAP1L1
FAM209A
ENG
ZNF189
MRPL50
TTC7B
ZSCAN30
ZNFX1
TGIF1
ZDHHC14
H4C8
VPS13D
TOPAZ1
LEP
ZNF30
ASH2L
CDCA7
ZNF562
PTGER2
ZNF777
APOL4
RSF1
AAMDC
KIF5C
ZNHIT6
DUXB
BAX
SLC27A5
MAP3K4
ZNF263
MTRNR2L8
IER3IP1
IQGAP1
CYP4F22
ZNF550
SLC1A7
ZNF426
DHRS7B
ZNF75D
ZNF347
DUX4
BPIFB3
LMLN
IQCG
ZNF300
ZNF317
RBPJ
SNX20
CALML3
PRDX6
ADCY10
ADI1
BAAT
IGFALS
ZNF761
LLPH
SLC30A7
EXTL2
GPRC5C
METTL7A
TDP2
ACOT13
SARS2
MRPS12
TMEM62
ANKRD45
EIF4A3
SPIDR
ZFP69
GRAMD4
FAAH
RNGTT
SGPP1
TRIM32
ASTN2
COQ8A
ZNF662
ZNF627
CACNG1
NOS3
CATSPERE
ADSS2
SLC28A2
SYT3
ZNF619
PEX7
CTAG1B
CTAG1A
TLE7
TCF25
BSDC1
LOC102724265
RTCA
MSH3
DHFR
MTRNR2L2
ZNF341
ERN2
RBM26
C4B_2
C4B
TNXB
CYC1
GPAA1
EXOSC4
TACC1
EXOC6
SPACA3
GOLGA5
BTBD8
MRPS16
ZNF394
OPN1SW
ZNF594
HERPUD2
HLA-C
BCL7B
LCN8
LCN15
LCN6
VPS37C
LBP
EHHADH
PER3
LZTR1
ZBTB17
CDYL
CFAP43
SCCPDH
S100A6
S100A5
S100A4
S100A3
RBMXL2
KIF15
KIAA1143
CABP5
FEM1C
PADI4
LOC100289561
MIER1
DNAI4
ADAR
APOL2
APOL1
ZNF143
ATXN2L
DLK2
GAL3ST2
MRPS33
ACOT2
HEATR4
ANKRD65
MRPL20
MANEA
PHRF1
ANKRD13D
SSH3
SAP130
OR4K17
ZNF577
ANKFY1
IFNAR1
ZNF57
MLLT1
LRRC61
ACTR3C
EFCAB10
PRSS38
SOX30
DGKH
ACER2
ZNF780B
FEM1B
PLA2G1B
FBXO8
CEP44
TAS2R41
DEGS2
LOC110384692
C4A
IFI6
MSRA
FKBP5
PRIM1
HSD17B6
RNF126
EFHD2
FSTL3
MINDY3
FDX1
ZKSCAN3
ZNF230
TANK
CFAP20
C19orf18
NCKAP1
METTL8
DCAF17
GUCA1B
AGGF1
ELFN1
IFT88
KRTAP10-9
CYP17A1
BORCS7
HTR7
ARL2BP
ERCC6
TRIM69
AUH
ZNF438
C10orf143
DIP2B
CATIP
GHRHR
RAB39B
ZBTB26
RABGAP1
ACP6
ZNF350
OR10A5
TTLL1
SLC25A33
SECTM1
RIC8B
SNAP47
NDUFS4
HACD2
ZNF83
FAM234B
HYAL1
NAA80
HYAL3
CLIC3
LCNL1
AQP11
SLC25A23
CRB3
SPDEF
TRANK1
UBE2D3
CISD2
GALNT1
DIRAS1
BCL7A
SPATA45
OR6F1
ZNF35
POM121
ZNF683
ESR2
RAX2
MATK
PPP5D1
CALM3
POLK
CERT1
FAM227B
DTWD1
GAS2L3
RMND5A
IL13
EPHX2
GATAD1
ZNF454
ETNK1
UBAP2L
C1orf43
ZNF20
ERGIC1
ZNF324B
ZNF132
ZNF443
ZNF669
GIMAP4
KAT6A
PLEKHM2
TRIP11
OAS1
APOBEC3B
RSU1
SPSB1
ZNF439
NOX5
GLO1
IMMP2L
AIFM2
ACAA2
PSEN1
COX6A1
PTPRN2
YJU2
TMPRSS12
C3orf86
KDM3A
BANP
C2orf69
MIPOL1
HP
CANT1
C1QTNF1
ZNF25
FOLR3
UXS1
C2orf66
ACSM2B
IL36B
PDRG1
NRARP
MS4A6A
ARHGEF4
EXT2
ZBTB5
ZNF24
C2orf88
TOP3B
RUSC2
PXYLP1
VN1R5
ATF1
PDE7A
TESC
C9orf153
CNGA1
L2HGDH
DMAC2L
SAMD1
C19orf67
ARPP19
CDCP1
TRIM48
IL1R1
CAB39L
PLVAP
BAG3
ZNF398
ZNF425
TAF4
TRIM38
TYW3
CRYZ
CHST3
GTDC1
ADA
COQ9
CIAPIN1
EPS15L1
GPR35
SMIM31
LARP1
ABL1
ABCC9
C1orf158
SNIP1
DNALI1
TMEM35A
TAF12
TMCC3
FAT1
PXDNL
TTC30B
ST6GALNAC6
TXN2
SLC35G5
PARP15
NDUFA8
MORN5
PDCD7
ZNF891
ZNF10
OSBPL8
HS2ST1
CCDC6
KRT26
KRT25
HAUS5
CUL2
PPARGC1B
HTR1D
RBBP5
GYG2
REN
LPIN2
RALBP1
PPP1R15A
CCR7
LRRIQ4
LRRC34
TMEM42
TMEM9
CRISP2
CHD1L
AADAC
ARL4D
PARP16
FAM71E1
MRPL34
ABHD8
ANP32D
MUC3A
ZNF551
OXA1L
APOD
STAU1
DDX27
PDE4DIP
DEK
TAAR9
TAMM41
TLCD4
ZNF117
MOB3A
IZUMO4
ERV3-1-ZNF117
ERV3-1
FKBP9
NUDT9
SLC9A1
SHISAL2B
RGS21
DUSP28
ANKMY1
TLR2
ACOX3
TRMT44
RBAK-RBAKDN
RBAK
SWAP70
ZNF660
CCDC130
TSPAN8
CAPG
SDR42E1
BDH1
ZBTB44
ZNF211
HK1
ZNF613
TMEM107
STBD1
TENT2
AACS
LY6H
ORC5
RSAD2
PRSS3
MRPL55
DBI
C2orf76
SULT2A1
HDAC9
ERAL1
STON2
TNK1
RFC1
NUDCD3
LAMB2
POLR2E
GPX4
ACYP2
SCTR
MID1
DDX19B
PIP
HDLBP
C1orf159
POLE4
TIGD2
PTGS1
SSH1
ZNF879
SEC14L1
CNOT11
EOLA1
HSFX4
PNMA3
CEACAM21
NME4
DECR2
PGAP6
SLC35E2A
HPCAL1
PAFAH2
SMCO1
GLT6D1
RGPD2
RGPD1
USP6NL
NRBP2
RNF168
AADACL2
RGS18
BCOR
TMC7
ATG7
CCDC181
COLEC11
MIF
APOL3
ZNF679
TMEM240
NUP210L
ASS1
TXNL4B
DHX38
B3GNT4
HTR3E
COL23A1
PRKAR1B
ZMYM6
ZFP36L1
FHL5
TM9SF2
AGK
HFE
JAGN1
VBP1
FOXK2
KIF2C
BTN3A3
CD200R1L
CEBPB
SIGLEC14
NLRP2B
CUTC
COX15
LUC7L2
ACTL8
CEP72
ZNF93
PCP4L1
PHLDA2
PDE6G
FOLR2
RP9
EPO
HCN2
CYP2A7
SEM1
BAG2
SPAAR
HRCT1
PHB
RBM28
ZFP1
PACS1
KCNQ4
SOAT2
DHX30
CXCR2
RPL12
LRSAM1
METTL16
FBXO17
OR2W3
MACC1
UBLCP1
ZNF778
POM121C
ZC3H10
RPL41
WAC
ZNF816-ZNF321P
ZNF816
HIP1
EIF3L
ANKRD54
KIAA1958
C9orf147
PPL
SEL1L
ERICH3
ZNF311
FBXO21
NOCT
KRT16
GPAM
ACVR1B
ZSCAN18
SLC52A3
C1RL
CYP46A1
HEPN1
SIAE
FANCL
SPA17
PRKACB
SUCLG1
FRRS1
FOXN2
SAR1A
TDRD7
SRL
NT5DC1
MRS2
INSL6
FMC1-LUC7L2
FMC1
RSL24D1
ADAP1
YTHDC2
PDE2A
CTSV
GSTT4
CABIN1
ZNF404
ENTPD1
LYZL1
ZNF565
KASH5
WRN
PURG
PPT1
MNDA
RAB40B
DNAJC3
ZNF226
CYREN
P2RX6
YBEY
MCM3AP
FRG2C
WDR33
PDP1
MID2
LOC102724770
DGCR6
ITGB3BP
EFCAB7
FAM153B
FRG2
FGD3
PDE11A
RHOT1
CRP
LMLN2
ADAM21
APOC3
APOA1
MYH2
CYP2C9
EDF1
CFHR4
ACY3
FAM193B
BCAR3
B4GALNT4
SULT1C3
ZNF527
TMEM229B
TSPAN5
NKX1-1
INKA2
DDX20
AKR7A3
ST3GAL5
DMXL2
TMEM242
NUF2
PPP2R3A
MAPRE2
MTF2
NXPE4
RAB37
SPATA33
IFNAR2
SNX11
CBX1
NOTCH2NLC
YWHAQ
CALCB
NOTCH2NLB
NOTCH2NLA
ZKSCAN7
RABGAP1L
DNAJC25-GNG10
DNAJC25
NARF
DIO2
GBA
RTP5
CAT
POLD1
PSMD8
ARHGAP45
RPS7
MTRNR2L1
PAIP2B
NEMF
DMAP1
MAPK11
SNX16
ZFP30
AURKAIP1
SAMD4B
GMFG
DUSP6
SF3A3
RPL39L
SSBP1
TEDC1
CRIP1
ABLIM2
FRMPD4
CYBC1
TIMELESS
C1GALT1C1L
PNPLA7
MRPL41
CRIP2
COX16
ACBD6
PLA2G4E
LILRA5
FGL2
CLPP
FBXO31
SUPT6H
SDF2
RPL10L
TARS2
SAMD14
JMJD1C
TBC1D19
CD209
SRPRB
PAXBP1
MAD1L1
NCKAP1L
CREBL2
C16orf54
SELENOH
B3GALT2
GPD1L
DCP1A
LRIG2
RPS29
MYLK
SLC2A7
TMCC1
RNASET2
EPB41L2
COMMD2
MED23
MRLN
MAP3K2
TRIP4
PCLAF
PEX3
ADAT2
EAPP
FRA10AC1
SATB1
TESK2
MMACHC
ZNF487
RPL27
IFI35
OAZ3
HTR5A
SCGB1C2
SCGB1C1
NUDT15
UGT1A10
POU2F1
NFE2L3
B4GALNT3
RBBP9
C3orf14
SPATA13
RPL11
WDR3
TTC32
GDAP2
NBPF1
DSTYK
NPAS4
CLTB
ZER1
RPGRIP1L
FTO
SUPT7L
SLC4A1AP
TATDN3
NSL1
PIAS2
REM1
DEFB124
FKBP11
LSS
SMAD1
TMX2
MED19
SLC24A1
TTLL12
ZMPSTE24
ODF3
CALD1
THOC5
NOTCH2
MDM4
STX18
TMEM161A
PIN4
NDUFS7
TMEM14C
SPATA22
ZNF566
LRP5L
SEC22B
NME1
SLC38A9
GALK2
TMEM125
SLC33A1
EIF2D
INTS12
GSTCD
LHFPL4
SCAF11
ZC3HAV1
TACO1
TEX50
SLC41A3
SEMA3D
PARK7
RTP3
LTF
ETFBKMT
TMEM262
ITPR2
TBC1D13
PCYOX1
TMEM106C
ASPA
SLC17A5
PGLYRP4
TEFM
TMCO2
RRAGB
SAR1B
ADAMDEC1
TM9SF1
DLAT
ZNF611
LRP5
BRF2
PLK2
RPL37
CARD6
REEP3
LIMS2
ZNF391
GCNT1
S100A2
RMDN2
NRL
DCAF11
DUSP16
RERE
MNAT1
CALCRL
MAPK10
LSG1
MTERF1
FAF1
REXO4
ADAMTS13
VN1R4
CASP10
CD14
TRMT5
SLC38A6
SMIM12
POLR3B