ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2059876 | BJAB
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◣ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
PI4K2B
SMYD3
SLC1A7
NSMAF
ST20-MTHFS
ZNFX1
ZSCAN30
KCNJ15
F2RL3
THEM4
SLC2A7
CHD1L
YWHAQ
ZWINT
TATDN3
NSL1
BRF2
BAX
ZNF550
ACY3
THUMPD1
OBSCN
MAPK11
MOGAT3
TSKU
GORASP2
HNRNPLL
ADAM21
ZNF708
COQ8A
SNX20
SGCE
PEG10
APOBEC3B
HYDIN
CCDC200
CENPV
IER3IP1
MIXL1
BEST2
ACTL8
WDR33
LMLN
IQCG
MTRNR2L8
UBE2F
SAMD4B
GMFG
EIF4A3
RBBP9
AUH
FIS1
ZNF433
MID2
UBE2D3
CISD2
RGS18
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FEM1C
DTX2
MSH3
DHFR
MTRNR2L2
NSFL1C
YPEL3
TBX6
TEAD2
DKKL1
ZNF117
EFCAB12
FKBP9
ORAI2
MEMO1
GPRC5C
CEP72
C5orf49
ZNF24
SPDYE1
DEK
BFSP2
IFI6
PDP1
TTC32
PARP14
ST3GAL5
ZBTB26
RABGAP1
ATP5F1B
MAP3K2
GTPBP4
FN3K
DBNDD2
BRSK2
PTRHD1
CENPO
CMTM3
IGFALS
GPR35
NLRC4
TBC1D22A
RPS29
NFASC
LSG1
CDT1
APRT
ZFP30
FRG2C
ZNF324B
ZNF132
KMT2A
MGAT5B
SUPT7L
SLC4A1AP
DUX4
PSMF1
TRRAP
TMEM130
H2AZ2
ITGB3BP
EFCAB7
HACD2
SEM1
ZNF341
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
SEC23B
METTL8
DCAF17
FPR2
SLC25A51
B3GNTL1
ADARB1
MCF2L2
FGF1
POLR2J3
NARS1
MLLT1
ACTRT3
MYNN
ALKBH5
SMARCA4
CCDC88A
LDHD
CCDC130
PGBD2
CYP4F22
SCGB1C2
SCGB1C1
ODF3
MAD1L1
NUDT1
MRM2
PUM1
REM1
DEFB124
RCOR3
PLAAT1
SLC30A7
EXTL2
CCL24
CYP2E1
DPY30
TIMM22
TMEM61
ZNF3
COPS6
RPS7
LCP2
SPACA3
LUC7L2
FMC1-LUC7L2
FMC1
PRSS38
PARP15
PARP9
DTX3L
BCAR3
FAM160B1
PNMA3
MBOAT4
DCTN6
DEGS2
CPT2
LBP
PAXBP1
GGH
FBXO38
GSPT1
BPIFB3
WDR36
C2orf69
KDM3A
CYB5R4
SLC28A2
SLC18A2
RHOT1
NME4
DECR2
PGAP6
C16orf74
CHD6
CRIP3
HPS6
ARMH3
SPDYE17
TOR1AIP2
TOR1AIP1
TMEM43
CHCHD4
OGFOD3
HEXD
COX6A1
RPL27
IFI35
C1orf100
TATDN2
BRWD1
MAN2A1
MTF2
GBA
TAS2R39
BFSP1
EIF4A2
NUF2
PLEKHF2
PCP4L1
MTMR12
LOC101928841
SRXN1
MAIP1
ATAD2
GUK1
ZNF562
PRKAR1B
PRCP
DDIAS
DEFB128
RFXANK
BORCS8-MEF2B
BORCS8
MRPS16
RPS14
DEFB116
WDR43
FAM133B
USP3
MTRNR2L1
HUS1
FGD3
SLC24A1
C2orf88
NEMF
TLR2
LCN8
LCN6
LCN10
PIP
MDM4
RTTN
ABCB4
CDCA7
LZTR1
RPL39L
LMTK2
UPK3BL2
SPDYE2B
SPDYE2
CYP51A1
MYH2
CCDC149
HNRNPA1L2
PRDX6
SLC30A6
ARHGEF18
MRPL40
HIRA
VPS13B
INTS12
GSTCD
MAML1
MTBP
MRPL13
RERE
PET117
KAT14
PMFBP1
SPAST
IAH1
YME1L1
MASTL
FAM193B
NPAS4
MED4
POLR2J2
ZNF441
GTF2H2
MRPL19
GJC3
SNX11
CBX1
SAMD4A
NDUFS6
MRPL36
RASSF2
R3HDM4
KISS1R
AURKAIP1
KRBA1
EXOC6
SNRPB2
RNF141
EIF1AD
CST6
BANF1
NDUFA4
EDF1
METAP1D
BIN2
FRA10AC1
FAM184A
PPIP5K2
F11R
SMIM13
HDHD5
TMEM65
MKNK1
TRMT2A
RANBP1
USP32
MTIF2
SSBP1
GTDC1
GLT6D1
EPRS1
CAMTA1
PER3
PDIA4
NBN
METTL25
CCDC59
SNAP47
JMJD4
FOLR1
SLC33A1
TEX46
KDM1A
LSR
IL22RA2
FRG2
ERVW-1
VARS2
GTF2H4
MLEC
SPHK2
RPL18
FAM83E
RB1
FAM98A
EIF4EBP1
DCP1A
TRIP6
SRRT
ATR
TMEM239
C20orf141
WWP2
COMMD2
NUDCD3
CRKL
SPDYE3
SELENOH
RCBTB2
PTCD1
CPSF4
KAT6B
MRPL44
NDUFV1
SNAP29
PI4KA
UFD1
CDC45
HM13
CTAG1B
CTAG1A
PRKAB2
COA6
PLEKHM2
NCBP3
DND1
WDR55
SNRPB
UQCRC1
TMEM89
FAM228B
TP53I3
SF3B6
ORC5
ZNF275
PNMA6F
RPS15
ADAM22
RPS6KB2
PTPRCAP
CORO1B
ZNF83
STX18
SUGT1
RINT1
PUS7
CRP
CCDC150
NUP54
TSPAN10
NPLOC4
ZNF718
FBXO46
ZNF595
UPK3BL1
TGDS
GPR180
HMGB1
USPL1
PPP1CC
HK1
ABLIM2
BANP
DOK4
POU2F2
SNX16
TOX4
RAB2B
MUC3A
TBC1D19
DRAP1
C11orf68
DPY19L4
NOTCH1
TTC7B
ZNF141
ARL4D
LRRC37A3
DCT
WDFY1
IL21R
NBPF1
OPA1
SUGCT
MPLKIP
ZCCHC4
DGKD
LRP6
ZNF143
HIBADH
TIPARP
YIPF4
BCL2L1
FAM209A
HSPE1-MOB4
HSPE1
HSPD1
COQ9
CIAPIN1
HP
PDIA6
PSMG1
ZNHIT6
GAPVD1
CFAP36
NME1
CSRP1
ZMPSTE24
TMCO2
UBB
R3HCC1L
CLTC
ANKEF1
AP1G1
EAPP
CCDC97
NEIL1
NDUFS7
GFI1B
TSC1
NYAP1
ZNF527
ZNF438
CCSER2
IBA57
ATXN2
SDHAF3
FAM98B
PALM3
SPRYD7
NAPEPLD
CA14
SLC9A3R1
CLUL1
FGL2
TRIP4
PCLAF
ZNF408
ARHGAP1
REN
CRNKL1
CFAP61
KAT2A
HSPB9
DHX58
KANSL3
FER1L5
KLHL22
FCN2
NDUFB3
FAM126B
ZZEF1
CYB5D2
NDUFAF6
FAM71E1
CA2
SEC14L1
CD209
PPP5D1
CALM3
ZNF292
PEX5L
TMEM229B
ID1
HIP1
MCM7
AP4M1
GNG2
MICU2
TMPRSS12
GCFC2
TMEM161A
SLC41A3
USP6NL
ZMAT2
HARS2
HARS1
SLC29A2
TBC1D13
TRIP12
FBXO36
RAC3
DCXR
RTN4R
TOR4A
WDR74
STX5
MOB3A
IZUMO4
PRPSAP1
SCCPDH
NUDT15
EMILIN1
OST4
KHK
OR4K17
PEX3
ADAT2
MTRNR2L9
MEF2D
DYNC1LI2
DCAF10
ARL11
MCUR1
PDE6D
COPS7B
TGM1
RABGGTA
NT5C3A
RPL37
CARD6
TSG101
ZBTB8B
FZD1
PIH1D2
NKAPD1
SLC27A3
TMEM191C
RRP15
PCYT1A
ZNF25
IMMP2L
DDX1
RNF6
SPDYE14
SPDYE10P
CASTOR2
SEPTIN9
ADGRL1
TM9SF1
IPO4
LDB3
TBCD
HKDC1
TTLL12
TRMT61B
CCDC68
ZNF891
ZNF10
YDJC
CCDC116
RBBP5
FAM227B
DTWD1
MYLK
CCDC71L
POLR3B
SYNJ2
RPS6KA2
GALK2
REXO4
ADAMTS13
RUVBL1
COPS2
DCTN4
EEFSEC
TPCN1
TTLL1
MRPL48
GSTP1
SYPL1
RPS5
SLC7A11
BCAP29
UGT1A10
EDC4
SLC25A13
VPS13D
SELENBP1
QSOX2
CYP2C9
RABGAP1L
ALG10B
ZCWPW2
AZI2
TRAF6
RAG1
UBE3B
KCTD10
CBLL1
WWOX
GNB2
ACAA2
BTN3A1
PEX7
MRPS18C
HELQ
MS4A1
NSMCE4A
ZKSCAN4
NKAPL
NCOA1
ZSCAN26
ARHGAP45
UBL7
CAPN14
BHLHA15
CCNG2
UBE2L3
OR2L5
CCNI
DSTN
RAD54L2
FBXL13
ARMC10
FBXO11
C2CD4C
FAM170B
C8orf37
SFTPD
MIA3
CADM2
RBM14-RBM4
RBM14
EIF3E
CHST11
ELAC1
BIRC6
SEPTIN7
SRRM3
CREB5
LANCL2
CYC1
MOB4
GPAA1
EXOSC4
DHTKD1
IST1
NCF2
TNFAIP8L1
UCHL5
RO60
KDM5C
ZMIZ2
CYB561D1
EMC8
COX4I1
ATXN7L2
ATP6V0D1
AGRP
ING2
CCDC113
XKR3
RBM33
CALM2
GTF2H2C_2
GTF2H2C
DSTYK
TFPT
PRPF31
UIMC1
NMNAT1
LZIC
TVP23B
KDM3B
SIRPA
UBE2D2
ZNF572
RHEX
AP5S1
ZNF436
PCBP2
IFT22
BCR
ID2
CT45A10
MRPL58
VRK2
CRLS1
CD38
SCN4A
H3-3A
MRPS23
SIT1
IFI44
GOLGA3
TENT4B
DRG2
WBP1
INO80B
RPS26
REEP2
BLOC1S6
NAA35
VTA1
NMBR
UBOX5
FASTKD5
YJU2
ST6GALNAC6
SUPT4H1
CLDN14
DESI2
TRA2A
NCKAP1L
INTS5
GANAB
PDE4A
DIO2
INO80C
RBL1
PCNA
TMEM230
ZC3H6
SAYSD1
PLCB2
ZER1
MNAT1
MRPL30
MITD1
ZSCAN25
PPM1M
TWF2
VPS50
HEPACAM2
LARS2
SYT7
DNAJB12
TRUB2
COQ4
AKAP12
ZCCHC8
WIPI2
RNF139
DOCK2
HIVEP2
TFR2
PTGS1
PRKRIP1
XAB2
STXBP2
PCP2
BCL2A1
SLC24A4
DIP2A
NOP16
HIGD2A
PUS10
PEX13
NDUFAF5
ESF1
TCTEX1D2
ETF1
LIMS2
FAM118A
ZNF268
OASL
LOC100289561
GARS1
LIMK1
SPDYE6
ATP5MF-PTCD1
ATP5MF
UGCG
N6AMT1
ZNF789
C18orf21
SELENOI
ADGRF3
DHRS12
TRAM2
IRF5
NEDD9
SOCS5
DUS1L
SPINT2
PPP1R14A
KIZ
GOLPH3
ANGEL1
UNC50
COA5
PSEN2
RPS20
CDK12
MED1
MAPKBP1
MCL1
PTGER2
TMEM41A
ZNF285
SNIP1
DNALI1
AARS2
CAB39L
ETV5
SETDB2-PHF11
SETDB2
ATE1
MRPL42
PHIP
NUDT7
C11orf80
GABPB2
FERMT1
MRPL38
TRIM65
PDF
NIP7
COG8
ACBD6
MTERF4
PDGFD
MRPS26
GNRH2
CLK4
ZNF212
TCTEX1D4
PLK3
BTBD19
NFAT5
SLC35A1
RABIF
HS1BP3
STX16
CCS
CCDC87
SECISBP2L
KCTD5
TERF2
ABHD12
MRPL1
SRP9
ZNRF4
ING3
BANK1
KPNA3
B4GALT7
TMED9
NXPH3
PPDPF
ZNF333
GNG7
MRPL3
ITGA4
KAT5
RNASEH2C
FAM53C
CDC25C
ENG
RAB8A
RBM28
COPS8
IL24
ZNF337
COMT
POLR1F
SLC39A13
ARL14EP
PTPRA
PBRM1
GNL3
CD300LD
CATSPERE
ADSS2
ANKRD36
COMMD1
TENT5B
SRPRB
RRAGB
POLE4
ASNS
SFSWAP
SCN3B
RRBP1
SLC26A11
EIF2D
KRR1
RAD52
CUL2
GABPB1
FPR1
RPS6
POR
NOP56
RIC1
PKM
MARCHF10
CYLD
TRIO
SCAND1
DPP9
CFAP20
MGST3
TMEM219
TMEM101
SCP2
CCNL1
TAF3
MTX2
THAP7
AOPEP
AP3B1
TNPO3
RTN4
FER
IDH3B
TMEM262
SPATC1L
USP15
VPS4A
MAP3K21
RGPD2
RGPD1
ABCB10
SNX8
SMIM26
THAP11
NUTF2
CENPT
MCMBP
KATNBL1
PAK2
CLIC3
GAS2L3
LUC7L
FAM234A
CAB39
C1GALT1
CXCR2
WDR70
NUP155
CCDC186
CDCA7L
SMURF2
WWC1
B4GALNT3
TEFM
ZNF770
FBXO22
KIAA0895