ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065547 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◣ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
KCNJ15
ZNF436
ZWINT
ZNF550
SMCO1
PI4K2B
OBSCN
BSDC1
APOC3
APOA1
CYB5R4
ZNF555
FGD3
MID2
C19orf18
AADACL4
ITGB3BP
EFCAB7
ZSCAN32
ZNF174
DEGS2
CCDC200
ZNHIT6
WDR33
SELENBP1
ZNF24
MRPL55
MAMDC2
SMYD3
INKA2
DDX20
AKR7A3
YPEL3
TBX6
IFNAR2
TTLL1
KAT6B
MAPRE2
PRKACB
CPLX1
TSPAN5
NXPE4
ZSCAN31
KRBA1
ZNF514
UBE2F
ZNF572
ZBTB26
RABGAP1
PDE11A
F2RL3
TMEM229B
ZNF3
ABLIM2
WDR74
STX5
LDHD
ST20-MTHFS
MTRNR2L8
ZNF134
FAM184A
IL22RA2
FAM209A
ZNF829
ZNF568
RRAGB
ANO9
PTDSS2
FRMPD4
ZFP30
ZNF433
ZNF878
SRPRB
SAMD14
SAMD4B
GMFG
GPR35
MAP3K4
PRSS38
TBC1D22A
RABGAP1L
ZBTB8B
UQCRC1
TMEM89
RBBP5
ZNF891
ZNF10
YWHAQ
MRPS33
MYOG
GLT6D1
TSKU
ZNF623
MKLN1
STC1
SUMO3
IER3IP1
MTF2
ZNF426
SF3A3
NOX5
THEM4
TARS2
EDF1
ZNF324B
ZNF132
NOTCH2NLC
NOTCH2
DUSP6
NKX1-1
PNMA3
MS4A10
GALNT1
EIF4A3
DUX4
DHRS2
ZNF792
DBNDD2
COL18A1
VPS13D
ZNF350
SLC30A7
EXTL2
OPRL1
RGS19
LKAAEAR1
TEAD2
DKKL1
NUF2
TMEM161A
ZNF772
ZNF32
ZSCAN18
TTI2
RPL12
LRSAM1
KRTAP5-2
KRTAP5-1
ZNFX1
NRARP
CANT1
C1QTNF1
SSBP1
NOTCH2NLB
NOTCH2NLA
PRDX6
PEX7
ZNF165
DISP1
PXDN
ZNF501
ZNF502
ATP5F1B
BPIFB3
ZBED9
SNX11
CBX1
ZNF491
ZNF440
ZNF416
MSH3
DHFR
MTRNR2L2
MSRA
TMEM14C
NTSR2
COL23A1
ZNF404
CDCA7
ARHGAP39
FAM193B
PRRT1B
ACTL8
ID2
MTR
ZNF594
METTL7A
ACP6
C2orf69
B3GNTL1
LCN8
LCN15
LCN6
C10orf143
TMEM109
TMEM132A
ACY3
CYP46A1
ZNF662
AURKAIP1
TEX50
SDR42E1
RPIA
PRRG2
NOSIP
GTPBP4
C2orf88
OR4K17
ZNF117
GRAMD4
CDK19
AMD1
SLC1A7
NEMF
RPS29
ZNF613
TLE7
ZNF577
ZNF30
SLC33A1
DNAJC25-GNG10
DNAJC25
HACD2
COX16
RERE
CALCRL
RBBP9
IL36B
IL36RN
ADCY10
RNF217
LBP
CAT
ZNF135
LMBR1
YY1AP1
DAP3
SAP130
LARP1
DNAJB12
LUC7L
FAM234A
ZNF470
MYO1H
ANP32D
MROH7
EPB41L2
TATDN2
RTP5
GLYATL1
UTP3
GBA
TBC1D19
LY6K
CFAP298-TCP10L
CFAP298
RNF187
CROT
CFHR4
CNGA1
CALD1
IGFALS
ZNF300
TAS2R39
SUCLG1
PLA2G4E
C4B_2
C4B
FN3K
HLA-E
TNXB
RPL37
CARD6
RCAN1
ATP5MC2
TLR2
ZNF222
TTC32
SCTR
ZNF20
ISY1-RAB43
ISY1
CRLF2
VARS2
GTF2H4
ZNF708
ZSCAN30
MBOAT4
DCTN6
JMJD1C
CD14
TESK2
MMACHC
GABRR2
GALNTL5
C1orf159
EFHD2
PAXBP1
TDP2
ACOT13
ELAVL2
PHGDH
CCL24
SNX20
ALG14
TMEM44
GPBP1
TRAPPC8
FDX1
ELAC1
RAB30
CEP85L
TMEM242
PEX3
ADAT2
NARS2
ZSCAN22
COX7A2
MED23
ZNF527
WDR11
MRPL30
MITD1
CYP4F22
ELFN2
FAM234B
ZMPSTE24
TMCO2
SLC45A4
DIO2
FGL2
TYW3
CRYZ
PDXK
NUDT14
PTPRN2
MINDY3
TEDC1
CRIP1
CRIP2
RHEB
C3orf14
FAM13B
YJU2
SEMA3D
GRPEL2
RXRA
ZBTB44
UBE2D3
CISD2
SUPT7L
SLC4A1AP
SAR1B
MMEL1
TMEM259
CNN2
ZNF614
TRMT11
GABPB2
ATF7IP2
MLLT11
LIMS2
USP21
RNF39
PPP1R11
RDH12
POLR1H
ZNF454
UFC1
SULT1C4
COA6
CLEC12A
SERPINA3
PCDH15
ZNF726
APOBEC3B
METTL8
DCAF17
TMPRSS12
FAM13A
SAMD7
TFPT
PRPF31
RBM33
LPIN1
GLIPR1L2
MLPH
MYLK
ENG
RNF125
TRMT5
SLC38A6
ATL1
DCP1A
KDM3A
TBL1X
CPT2
EXOC6
ZNF391
LRP5L
TMEM125
NUP107
TATDN3
NSL1
P2RX2
LRCOL1
SPANXB1
MIPOL1
SPATA33
B3GALT2
MDM4
REXO4
ADAMTS13
RSF1
AAMDC
B4GALNT2
TEFM
MNAT1
METTL25
CCDC59
FABP6
IFIT1
OR1F12
PPRC1
CNIH4
ZNF879
HEATR1
DPYSL2
PNMA2
CPPED1
VAX1
TTC7B
SLC28A2
NOS3
ZNF546
IQGAP1
SLC25A53
FAM199X
NECAB2
BRF2
TIGD2
ATG5
CDC5L
BORCS6
PKP3
RPS7
SNRPD3
GUCD1
ZBTB33
NPR1
ILF2
EIF3F
ZNF540
SNRPE
ZNF571
CTAG1B
CTAG1A
DMAP1
TACO1
GTPBP3
ANO8
RCAN2
CCDC120
TRIP4
PCLAF
CEP85
NME1
PDCD6IP
ZNRF4
RPS13
KRTAP10-2
KRTAP10-1
ZNF83
EIF2S1
ATP6V1D
MOB4
DUXB
FAM120B
NDUFB3
FAM126B
ZNF263
ZNF75D
DLL1
CDYL
TPK1
PSMD8
OSGEPL1
NEK7
RGS21
PER3
IRAG1
SYT1
LUC7L2
FMC1-LUC7L2
FMC1
ATF7IP
ATP5MF-PTCD1
ATP5MF
COX6A1
LOC102724265
UBR2
IRF2BP2
SNCG
MMRN2
SKP2
LMBRD2
ZNF561
PRSS16
FAM153B
DSTYK
HECW2
MAN2A1
SDCCAG8
CEP170
SAMD1
C19orf67
TTC26
NIPAL1
ANKRD35
TMEM72
FANCC
REEP3
SPAAR
HRCT1
GASK1A
LIMK1
PAFAH2
ZNF292
HDAC2
AASDH
WDPCP
MDH1
CLTB
NDUFS7
EIF2D
NOP16
HIGD2A
PCBP3
MARK1
SHISAL2B
NBPF1
SMAD1
ZNF841
GSTA4
ZNF461
CD209
RMND5A
ATE1
ITSN1
CRYZL1
OSGIN1
MAD1L1
POLR3B
IARS1
PBX3
ZSCAN29
TUBGCP4
NAT10
ARL4D
PDE1A
ARHGAP45
ZNF556
NME4
DECR2
PGAP6
CLEC18C
POLN
HAUS3
MRPS16
PARD3
DNAJC9
CYCS
IFI6
ZNF226
SIT1
ATG4C
CCDC107
ARHGEF39
RSU1
GCGR
SEC23B
VAV3
FRA10AC1
CCNI
LOC100129484
TNRC18
GPRC5C
ACOX3
TRMT44
TMEM41A
E2F2
ASH2L
VPS52
RPS18
B3GALT4
RPL5
AHCYL1
PLCH1
IL1RAP
ACTRT3
MYNN
HIGD2B
BBS4
CACNA1H
SELENOH
RAB18
HECTD4
SSTR5
DNM2
SLC2A7
GDNF
TOMM20
RHOT1
CD2
AFAP1
LTN1
CACNG1
B4GALNT4
HDAC8
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
RGS18
UBE2L3
CCDC33
RIMBP3C
RIMBP3B
TMBIM6
GFM2
SURF2
SURF1
RPL7A
MED22
TMEM107
GADD45A
PTGS1
SF3B5
LOC100421372
HSPA14
CDNF
SCMH1
SLC35A3
GYPC
BCAR3
IL21R
KLHL20
SYDE1
ZNF443
SLC24A1
IL36A
SLC43A2
DIP2B
PLK2
NCOA7
MRPS23
EDDM3A
RUNDC3B
TM2D1
CSTF2T
C19orf81
ZNF383
SLC35E2A
ZNF585B
ZNF585A
LMTK2
COMMD2
LSG1
TXLNB
PDP1
ZKSCAN7
MTERF4
CCNC
SGMS2
FCGR3A
ZNF347
TBC1D32
MAGEA11
IFNAR1
PDP2
DNAI3
SLAIN1
MACROD1
SGPP1
SNIP1
DNALI1
PPIL3
NIF3L1
TMEM79
SMG5
KRTAP10-8
HLA-C
KRTAP10-9
GORASP2
POM121
INTS5
GANAB
TM9SF3
RPL27
IFI35
PPIP5K2
AARS2
PPDPF
DCT
COL4A6
COL4A5
LRRC49
THAP10
TMCC3
ZNF627
PRIM2
HTRA2
DQX1
UCHL3
COMMD6
FOXO3B
LOC100289561
TFF1
RBM45
TFF2
RPS15
DNM1L
TUT1
MTA2
PALM
SLITRK5
BCL2L13
ZNF790
FBXO44
ATP6V1E1
IGFL3
FBXO2
FEM1C
PACSIN2
SCGB1C2
SCGB1C1
ODF3
ARID1A
DHTKD1
SULT2A1
CSTF1
AURKA
RIOK2
PARPBP
NUP37
ZNF679
CLIC3
TM9SF2
KCNMA1
MAIP1
PIH1D2
NKAPD1
PLEKHA3
FKBP7
GYG2
STAC2
PLEKHM3
HACL1
BTD
KRR1
YTHDC2
DHRS13
FLOT2
SLC39A6
ELP2
SCUBE3
TMEM101
TARS3
IRAK2
GTF2H2
C10orf88
SPAG9
TBC1D17
AKT1S1
VTA1
NMBR
PSMD2
SMG7
ECHDC1
KRTAP19-3
KRTAP19-2
KRTAP19-1
NT5C3A
SEM1
UTP25
ARF1
SLC6A18
DRG2
UBOX5
FASTKD5
OPN1SW
CCDC136
USP45
TSTD3
THOC5
MRPS18C
HELQ
HTR3A
TSPAN2
RGPD2
RGPD1
CEP120
SPRR2F
RTL10
GNB1L
MAEA
TCHH
NUDT15
ALKBH3
TPM4
MYH2
MLLT1
SRP9
STK32C
MIS18BP1
RAB5IF
SPDEF
PLA2G2E
TMEM275
TMEM30A
MMP8
ZNF143
DEK
CCDC150
SLC35B1
LACRT
TTC3
ZNF487
BAX
CHMP7
ARID3B
POLG
SPATA5
NUDT6
DEDD
RSPH3
ZBTB25
ZBTB1
CALCB
SNRPB
CCNB1IP1
PARP2
ACSBG2
MED18
PIKFYVE
SLC2A8
POU2F1
FKBP9
EFCAB10
HAX1
TIAM1
MYOM2
FZD8
DNAJB13
C1orf167
DYRK4
CRNKL1
CFAP61
ZMYND11
B3GALNT2
DDX58
BAAT
EAPP
SEC22B
EPRS1
CASP7
HTR7
LMLN
IQCG
NR1H3
ACP2
TMA16
TNPO3
SNRPD1
WBP1
INO80B
RPA2
GPC6
RALBP1
RBAK-RBAKDN
RBAK
KDM6B
ZNF610
PPP3CA
CALHM5
GSTM5
SMIM13
MAGOH
LRRC29
VPS33A
CCDC90B
BRAP
ACAD10
FEM1B
POLDIP3
EIF1AD
CST6
BANF1
RAB33A
TAF4
SLCO1A2
AIFM1
FAAH
SAMD4A
LCA5
RAG2
IFTAP
TMEM205
RAB3D
CCDC159
KRTAP13-3
PLPPR2
ADAM21
IFT88
MRPL1
CFAP20
ABCG1
CREM
EPHA3
KHNYN
CBLN3
CCDC114
VSX2
C1orf198
TSSC4
SLC25A44
RAB6D
ZNF791
ZNF490
ARHGAP24
GRAMD1B
UGT1A10
ATP1A1
TMEM128
ZNF302
DDX43
VPS13B
SCAND1
BAZ2A
MTO1
CGAS
SLC27A5
ZBTB45
DYNC2I1
CC2D2B
NRL
DCAF11
RPS14
CLEC18B
ZSWIM7
TTC19
ZNF736
SPATA13
SMIM12
ORC5
HSD17B11
PDGFD
MAST2
GTF2B
RARRES1
ACBD6
DCLRE1B
AP4B1
IRF9
ZWILCH
SNAPC5
RPL4
CBWD1
INPP4A
TSFM
EEF1AKMT3
EMILIN1
OST4
POMGNT1
KHK
LURAP1
S100A6
S100A5
S100A4
S100A3
RIMKLB
CYC1
GPAA1
EXOSC4
ZNF56
DOK3
DDX41
GMEB2
CEP350
PPIG
COQ8A
BFSP2
BAG3
ZZEF1
CYB5D2
SRSF11
LRRC40
PIP4P1
INHBE
GLI1
OSGEP
APEX1
ZNF57
CUL5
THAP4
MZF1
SNRNP35