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Data name ⇅	Database name ⇅	DOI ⇅	Description of data contents ⇅	Data file ⇅	Simple search URL ⇅	Data acquisition method ⇅	Data analysis method ⇅	Number of data entries ⇅	Data detail
Integrated List	JSNP	10.18908/lsdba.nbdc00114-005	List of data from "Mapping Information" and "Screening Information" put together every polymorphism (unless the polymorphism is mapped on two or more chromosomes). Derived from "Show List by Chromosome" of "Show List of SNPs" http://snp.ims.u-tokyo.ac.jp/search_list.html .	jsnp_list.zip (17.9 MB)	http://togodb.biosciencedbc.jp/togodb/view/jsnp_list#en	From "Screening Information" and"Mapping Information"	-	198,236 entries	Data detail open_in_full
Mapping Information	JSNP	10.18908/lsdba.nbdc00114-004	Information from mapping polymorphisms on the genome. Derived from "Dump JSNP" http://snp.ims.u-tokyo.ac.jp/map/cgi-bin/Dump/snp_region_filter.cgi .	jsnp_dump.zip (24 MB)	http://togodb.biosciencedbc.jp/togodb/view/jsnp_dump#en	From "Screening Information" and "Allele Frequency"	The location of the SNPs are mapped to the RefSeq （GRCh37） contig sequence, masked by MaskerAid, using BLAST with the SNP flanking sequence, after e-PCR preformed with the primers for amplification to extract their screened regions.	980,939 entries	Data detail open_in_full
Polymorphism Sequence	JSNP	10.18908/lsdba.nbdc00114-001	Information on polymorphisms (SNPs and insertions/deletions) and their flanking sequences Derived from "Flat files" ftp://ftp.hgc.jp/pub/hgc/db/snp/imsSNP140508.fas and ftp://ftp.hgc.jp/pub/hgc/db/snp/imsIND140508.fas	jsnp_seq.zip (10.6 MB)	http://togodb.biosciencedbc.jp/togodb/view/jsnp_seq#en	From "Screening Information"	-	197,195 entries	Data detail open_in_full
Screening Information	JSNP	10.18908/lsdba.nbdc00114-003	Information from polymorphism screening experiments. Derived from "Each Type of variation Found in Location in Gene" in "Data Contributions" http://snp.ims.u-tokyo.ac.jp/data_roots.html .	jsnp_screen.zip (15.6 MB)	http://togodb.biosciencedbc.jp/togodb/view/jsnp_screen#en	Exons, promotor regions and introns selected from human genomic sequences in GenBank and RefSeq were PCR amplified using DNA from 24 (IMS-JST), 48 (RIKEN) or 40 (TJWU) individuals as templates, and sequenced with capillary sequencers.	PolyPhred was used to assist verification of SNPs by eye inspection.	197,195 entries	Data detail open_in_full
cDNA library Table	KAIKOcDNA	10.18908/lsdba.nbdc00951-005	List of Bombyx mori cDNA libraries.	kaiko_cdna_library.zip (4.8 KB)	http://togodb.biosciencedbc.jp/togodb/view/kaiko_cdna_library#en	-	-	99 entries	Data detail open_in_full
Data name	Database name	DOI	Description of data contents	Data file	Simple search URL	Data acquisition method	Data analysis method	Number of data entries	Data detail