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List of Data Metadata
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Data name ⇅ Database name ⇅ DOI ⇅ Description of data contents ⇅ Data file ⇅ Simple search URL ⇅ Data acquisition method ⇅ Data analysis method ⇅ Number of data entries ⇅ Data detail
MS mode List jPOST repository 10.18908/lsdba.nbdc01594-007.V002

The list of MS mode It is refered from "profile list".

 jpost_ms_mode_list.zip
(6.7 KB) 		http://togodb.biosciencedbc.jp/togodb/view/jpost_ms_mode_list#en

231 entries
Data detail open_in_full
Profile list jPOST repository 10.18908/lsdba.nbdc01594-003.V002

The list of expeerimental profiles such as sample or enzymes etc. It is refered from "metadata".

 jpost_profile_list.zip
(236 KB) 		http://togodb.biosciencedbc.jp/togodb/view/jpost_profile_list#en

55,403 entries
Data detail open_in_full
Sample list jPOST repository 10.18908/lsdba.nbdc01594-004.V002

The list of experimental samples It is refered from "profile list".

 jpost_sample_list.zip
(21 KB) 		http://togodb.biosciencedbc.jp/togodb/view/jpost_sample_list#en

989 entries
Data detail open_in_full
Allele Frequency JSNP 10.18908/lsdba.nbdc00114-002

Polymorphism allele frequencies in Japanese.
Out of 84651 polymorphisms, 13 and 39 SNPs are assayed in three (POP_*) and two (RIKEN_japanese_*) panels, respectively.
Derived from "Flat files" ftp://ftp.hgc.jp/pub/hgc/db/snp/alleleFreq140508.txt

 jsnp_allele_freq.zip
(1.4 MB) 		http://togodb.biosciencedbc.jp/togodb/view/jsnp_allele_freq#en

Multiplex PCR were done using the same primers as those for polymorphism screening, and templates from Japanese shown in Panel_ID description. Genotypes were determined with the invader assay (JBIC-allele and RIKEN_japanese_*), TaqMan assay (RIKEN-allele) or direct sequencing / allelic discrimination chemistries / restriction enzyme genotyping (POP_*).

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 84,716 entries
Data detail open_in_full
Flat Files JSNP 10.18908/lsdba.nbdc00114-006

Information on polymorphisms (SNPs and insertions/deletions) and their flanking sequences, and polymorphism allele frequencies in Japanese.
Provided as "Flat files" ftp://ftp.hgc.jp/pub/hgc/db/snp/ .

 jsnp_flat_files
(128 MB) 		-

Equivalent to "Polymorphism Sequence" and "Allele Frequency" .

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 11 files
Data detail open_in_full
Data name Database name DOI Description of data contents Data file Simple search URL Data acquisition method Data analysis method Number of data entries Data detail