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項目名 項目の説明
Observed

allele observed

Database Name

database name
JSNP_SNP: single nucleotide polymorphism
JSNP_InsDel_IND: insertion/deletion
JSNP_InsDel_MIC: microsatelite

Allele Frequency

(only in SimpleSearch pages) link to Allele Frequency of the same JSNP ID

Screening Information

(only in SimpleSearch pages) link to Screening Information of the same JSNP ID

Mapping Information

(only in SimpleSearch pages) link to Mapping Information of the same JSNP ID

Integrated List

(only in SimpleSearch pages) link to Integrated List of the same JSNP ID

dbSNP ss#

dbSNP ss (submitted SNP) number assigned

dbSNP rs#

dbSNP rs (reference SNP) number assigned

5' Flanking Sequence

5' flanking sequence

3' Flanking Sequence

3' flanking sequence

Offset in Flanking Sequence

position of the polymorphism in the flanking sequence

Total Length

total length of the flanking sequence

Accession No.

accession No. of the sequence for polymorphism screening

Offset in Record

position of the polymorphism in the sequence for polymorphism screening

Comment Type

1: the polymorphism overlaps with a repetitive sequence
2: the flanking sequence overlaps with a repetitive sequence

Gene Symbol

gene where the polymorphism is found
(information from LocusLink, GenBank and Unigene)

JSNP previous ID

JSNP previous ID
(IDs of IMS-JST104817 to IMS-JST105472 and IMS-JST075266 to IMS-JST075585 are reassigned with ssj IDs)

JSNP reference ID

JSNP reference ID
(where multiple JSNP IDs are assigned to the same polymorphism)

JSNP ID

JSNP ID
ID starting with IMS-JST: from IMS and JST
ID starting with ssj: from RIKEN SNP Research Center or from Tokyo Women's Medical University