ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

T2
Phrf1
Mia2
Dnmt1
Ptcd2
Mrps27
Prkdc
Mcm4
Cd164
Ift27
Pip5k1c
Rita1
Ddx54
Sod2
Uchl1
Brd2
Fam53c
Rpl22
Asah1
Ankrd13a
Taf15
Tacc1
Bzw2
Ankmy2
Ccdc85c
Gipc1
Akirin1
Ptov1
Wasl
Fam227a
Cby1
Sash1
Dbp
Tom1
Ptcd3
Polr1a
Ap2m1
Cnot6
Nphp4
Kcnab2
Mrps11
Mrpl46
Eif3b
Oasl1
Paxip1
Brat1
Cdiptos
Cdipt
Cmc2
Cenpn
Prdm10
Tigd5
Eef1d
Dlst
Cenpe
Atg12
Ap3s1
Vangl2
Pknox1
Rpn2
Mroh8
Slc39a3
Rusc2
Aldh4a1
Gpr108
Calm3
Septin11
Sspn
Dut
Them6
Atp6v0c
Dot1l
Spata17
Gpatch2
Cln8
Madd
Por
Arntl
Sp2
Lyrm1
Dcun1d3
Rab5b
Dpp9
Pfdn4
Fchsd2
Flcn
Diaph1
Pafah1b3
Rab28
Cspp1
Cops5
F830045P16Rik
Iqch
Aagab
Galnt10
Akt2
Prkci
Myh14
Uros
Bccip
Slc35e2
Sharpin
Maf1
Eed
Raly
Timeless
Zfp24
Tepsin
Ndufaf8
Zfp27
Rbbp6
Rfx1
Pcdh9
Rpl19
Ak1
Atrnl1
Tcp11
Tmem267
Ptdss1
Mterf3
Rnasek
Uchl3
Fbxo33
Celsr3
Ppt2
Rbbp9
Dedd2
Dohh
Sri
Hdac2
Inava
Atg101
Arrdc4
Oxr1
Chmp3
Paip2b
Get3
Smarcal1
Dgat2
Fanci
Arid4a
Rps29
Ndufb1
Cpsf2
Mlst8
G3bp1
Gnb2
Cd3eap
Dnm2
Mblac1
Hyal2
Abhd2
Prmt1
Col9a1
Hap1
Cfap77
Frat1
Sp1
Hdac1
Mat2a
Srxn1
Slbp
Cnot1
Tsc22d1
Polg
Arl2
Tmem260
Nmral1
Traf2
Zfp748
Phldb1
Frat2
Abhd16a
Kctd2
Atp5h
Cwc27
Stx16
Fgd4
Wasf1
Cdc40
Uqcrq
Flad1
Tbc1d17
Akt1s1
Map7d1
Pkia
Atg16l2
2310039H08Rik
Atp8a1
Tpbg
Apela
Uqcrh
Lrrc41
Tada3
Arpc4
Ppm1l
Sigmar1
Ska2
Prr11
Vmn2r4
Mtmr14
Cenpp
Ndst2
Tardbp
Lrpprc
Bzw1
Hexim1
Fzd2
Fbh1
Ankrd16
Prkag2
Ablim1
Mrpl21
Ighmbp2
Uba1
Smg8
Utp18
Mbtd1
BC005537
Limch1
Tst
Mpst
Myl12a
Tcp11l2
Osbp
Dffb
Cep104
Syn1
Sox5
Pik3r3
Cnot3
Atp5b
Stt3a
Polr2a
Wasf2
Eif2ak3
Zdhhc5
Selenow
Ogfod1
Nudt21
Elmo2
Plekhf2
Rtkn
Psip1
Lsg1
Dcps
Nfatc2ip
Ttll7
Mgrn1
Frmd6
Ppp6r3
Chchd2
Cic
Top2a
Ankrd54
Adpgk
Tle3
Mocs3
Dpm1
Ube2b
Pip4k2b
Selenop
Cdt1
Proser1
Nhlrc3
Rara
Fus
Cct5
Atpsckmt
Ngdn
Rmnd5a
Zfp574
Rab34
Tnrc6b
Zfp691
Opa3
Noct
Ephb2
Cobll1
Slc4a2
Cul2
Rptor
Ncbp2
0610012G03Rik
Cyp2u1
Fkbp8
Rtkn2
Rhobtb3
Col9a3
Rab4b
Trp53
Wrap53
Rcc2
Prdx2
Myl12b
Robo1
Tmem198b
Dnajc14
Prickle1
Ube2a
Fdft1
Ndufs7
Arvcf
Chrm1
Tom1l2
Drc3
Atf7
Phldb2
Gpsm2
Ppdpf
Smc3
Camta1
Pabpn1
Nudt2
Kif24
Stip1
Bscl2
Gng3
Zfyve21
Xrcc3
Ss18
Hnrnpc
Lars
Glrx5
Ss18l1
Psma7
Fos
Nf2
Zmat2
Cldnd1
Plpp2
Rnf5
Zfp654
Cggbp1
Kif1b
Swsap1
Rab11b
Tnrc18
Zfp219
Ung
Magi1
Cdc25c
C1d
Ivd
Tmem242
Crebrf
Npas4
Cdk2ap2
Rhbdd3
Ewsr1
Lrch4
Bcl9
Mon1b
Dcaf7
Fuz
Zfp580
Slc25a25
Evi5l
Nlk
Akap8l
Rcl1
Ankhd1
Gfra1
Map3k3
Prpf40a
Arl6ip6
Syvn1
Ppfia3
Bcl6
Mapre3
Ypel4
Abhd18
Mrpl44
Got1
Tedc1
B4galt7
Trub2
Pcx
Wdr70
Atp5e
Pmvk
Maneal
Zfp687
Mis12
Derl2
Nectin3
Tomm40
Rhoj
S1pr2
Khsrp
Dap3
Kpnb1
Hnrnpl
Rgmb
Ube2c
Sin3a
Sorbs2
Enah
Nol6
Mdm2
Cdca8
9930104L06Rik
Mrpl1
Znhit3
Copz1
Sel1l
Gripap1
Gatad2a
Zfp180
Zfp101
Pdk2
Hint2
Rplp0
Ndufs4
Fbxw7
Igsf9b
Pcid2
Cul4a
Dhx30
Tpcn1
Iqcd
Vdr
Hmgcll1
Ugdh
Psma8
Agpat4
Erg
Creb3l2
Spag7
Mapk6
Anp32e
Tcf12
Pygo2
Scamp1
Ift140
Cramp1l
Arhgef40
Nynrin
Mtss2
Ccser2
Prkaca
Mvk
Mmab
Meis1
Get4
Kdsr
Atp5g1
Sox6
Nap1l4
Tbcb
Polr2i
Tmem160
Slc46a3
Frmd5
Cmtm5
Selenoh
Magel2
Katnb1
Per2
Fam110a
Kcnk2
Myh10
Rab40c
Pnn
Fbxl14
Tspan4
Polr2l
Cdca7l
Tmem218
Zswim4
Med23
Mrpl30
Mitd1
Timm17b
Pqbp1
Opa1
Chadl
Calcoco1
Lsr
Fam187b
Tfcp2
Fbxl15
Ggct
Vps50
Bcas3
Tgfb3
Pgd
Wfikkn2
Olfml1
Kmt5c
Ttc41
Hsp90b1
Kansl2
Tmx2
Med19
Tex14
Pan2
Rgs3
Lancl2
Arid1a
Dynll1
Cdo1
Mfsd8
Nup93
Leprot
Zfp869
Tctn2
Pin1
3110082I17Rik
Gm51425
Drg2
Yipf2
Timm29
Zfp513
Aars
Vps51
Gins2
Phb
Ufsp2
1700029J07Rik
Tmem198
Chpf
Zswim3
Acot8
Nup133
Pwwp2a
Otub2
Plxna3
Syne1
Tspan33
Gm5165
Ssrp1
Eapp
Ensa
Nr6a1
Kat6b
Bbx
Phf12
Dcaf11
Tjp2
Sptlc2
D16Ertd472e
Enpp2
Qrich1
Tcerg1
Hbp1
Ap2a1
Cyth2
Srp68
Eif5
Tomm22
Phka2
Mlec
Tomm70a
Srpk2
Pradc1
Cct7
Uvssa
Fkbp3
Palb2
Dctn5
Rnf26
Tma16
Slc35a3
Tdrkh
Mrps10
Dnttip2
Ankzf1
Bckdk
Gid4
Fxyd3
Chd6
Atxn7l2
Tatdn3
Nsl1
Dgcr8
Acsf3
Yif1a
Saxo1
Elavl2
Pnpla6
Ibtk
Nfe2l1
Cep192
Neurl2
Ctsa
Zfp668
Denr
Jag2
Gnai2
Kmt2a
Rtn3
Lrrc56
Hras
Sec14l1
Cbr3
Cdk12
Wdr77
Atp5pb
Rps27l
1700016H13Rik
Fam20b
Rbm25
Phlda3
Mtf2
Tecpr1
Pa2g4
Cenpu
Evpl
Nt5c3
Ttll10
Ilf2
Smim4
Rpl27
Inka1
Spsb3
Nubp2
Plekha1
Tmem41b
Arhgef4
Zscan25
Itgb4
Aig1
Inip
Fam149b
Ecd
Wwox
Cltc
Sh3kbp1
Sfi1
Rbm39
Sgms1
Ttc14
Styxl1
Mdh2
Susd6
Rab21
Spc25
Klk10
Rel
Zcchc14
Isy1
Spty2d1
Slc30a5
Eif4a3
Cwc22
Arhgap19
Nacc2
Jun
Git2
Cilk1
Aph1b
Srgap2
Fam72a
Ireb2
Letm1
Mrps31
Glce
Fam204a
Haspin
Med30
Banp
Psmd5
Slc29a1
Fam3c
Adnp
Hexim2
Armc1
Xpc
Lsm3
Zxdc
Cct8
Zbtb40
Psmb3
Arhgef19
Wdr27
Ube2d3
1600012H06Rik
Hspa4
Aff1
Ddx56
Hnrnpa2b1
Cbx3
Zmynd8
Mia
Fer
Knl1
Mapk14
Mtch2
Ints10
Samd4b
Gmfg
Arf2
Usp20
BC005624
Pmaip1
Wdr36
Serpinb5
Slc25a42
Bbs2
Miga2
Tpt1
Eea1
Abhd1
Slc36a4
Fam83b
Glo1
Mfsd13b
Cdr2
Dhrs13
Lamp1
Zfp386
Tfg
Zfp277
Dock4
Sgms2
Ist1
Rps19
Lama4
Rraga
Sppl2a
Emp1
Immp1l
Elp4
Crtc1
Plekhg1
Tbck
Aimp1
Micall1
Nvl
Rps7
Fut10
Scn4b
Fsbp
Dhx33
Rab33b
Adgrv1
Slc39a10
Spdl1
Znhit1
Plod3
Akap11
Tubb4b
Pou2af1
Utp3
Wdfy2
Tmem94
Chordc1
Mob1a
Met
Dst
Zfp607b
2900026A02Rik
Tut4
Fosl1
Dcp1a
Rnf14
Cd47
Mef2a
Eif3f
Commd1
Vwa1
Myo6
Tut1
Fdxr
Nuf2
Cstf2t
Stxbp4
Cox11
Nup54
Krr1
Anapc5
Snrnp200
Mindy2
1810024B03Rik
Polr3g
Mfsd4b4
Mblac2
Bod1l
Mast2
Uhrf2
Ndrg1
Kdm4a
Hars
Hars2
Sacm1l
Pxmp4
Nudcd2
Hmmr
Sphk2
Rpl18
Trib1
Ptger1
Ube2j2
Gbf1
Fem1b
Cdyl
Exosc4
Srp19
Cep63
Anapc13
Nedd4
Ints4
Cipc
Mtres1
Tanc1
Dnajc16
Lrriq3
Fpgt
Slc33a1
Zbtb5
Nufip1
Gpalpp1
Esyt2
Zfp143
Kdm4b
Tipin
Sec14l2
Mcm3
Ube2f
Ssbp1
Mideas
Rbm15
Smim14
Galk2
Cops2
Pkn3
Fubp1
Dnajb4
Birc2
Rgl2
Siah1b
Ahctf1
Echdc3
Xab2
Pet100
Sun1
Polq
Septin7
Nucb2
Tmem101
Ric8b
Bms1
Zbtb3
Spring1
Rnft2
Stat3
Get1
Gas7
Timm10
F13a1
Ubald2
Zzz3
Jpt2
Il18
Ddost
Bco2
Hip1
Cyth1
Kifc5b
Gtpbp3
Agbl5
Rnase10
P4hb
Fzd6
Vta1
Scamp5
St6galnac6
Psmb2
Dmxl1
Rps3a1
Ss18l2
Hes2
Cops4
Tiam2
Creld2
Alg12
Tspyl1
Htra2
Aup1
Fra10ac1
Snrpc
Canx
Agpat5
Ppil3
Nif3l1
Kctd9
Cdca2
Ltbp1
Egr2
Vamp4
Rrp15
Cnot11
Rtn4
Cnot8
Zfand3
Acp2
Slc25a45
Sarnp
Ormdl2
Hdac10
Znrd1as
Znrd1
Ddx17
Rbbp5
Gramd1b
A930018P22Rik
Calm1
Zfp961
Snx12
Ap1g1
B230219D22Rik
Rpl36al
Prr3
Mgat2
Gnl1
Zbtb2
Hsd17b12
Usp2
Actr3
Postn
Map3k7
Timm22
Pex3
Nop14
Hsf1
Grk4
Bop1
Adat2
Ddx41
Cgref1
Creb5
Prcc
Ankfy1
Sulf1
Dad1
Abhd4
Wdr92
Pno1
Fbxo31
Mest
Aox1
Tulp4
Ppp1r11
Cfap298
Txnip
Gm6712
Trim45
Agap1
Rps6ka5
Ppp6c
Ap4e1
Zfp563
Vps28
Marchf7
Smarcd2
Faap24
Trp53rkb
Mettl25
Hnrnpr
Gcnt2
Ccdc59
Ttbk2
Nbr1
Klhl26
Cflar
Brca1
Slc43a3
Ddx20
Unk
Luc7l2
Npc2
Nelfa
Mtmr6
Kansl3
Isca2
Herc2
Cox7a2
Txnl4b
Dhx38
Top1mt
Ctnnd1
Cul1
Fam160a2
Gm12258
Ift22
Slc25a20
Pcbp2
Tas2r134
Pip4p1
Tcf3
Retsat
Elmod3
Panx3
Nme1
Grk5
Micos10
Dnajc24
Klhl20
Dus1l