ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX450830 | Epidermis
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◣ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Jag2
Lrrc56
Hras
Cbr3
Mia2
Akirin1
Inka1
Cnot6
Rps27l
Pip5k1c
Dlst
Pa2g4
Iqch
Aagab
Kctd2
Atp5h
Phlda3
Denr
Scn4b
1700016H13Rik
Evpl
Por
Dut
Kmt2a
Ndst2
Pmaip1
Tecpr1
Abhd16a
Ptcd2
Mrps27
Asah1
Arl2
Hes2
Fam20b
Zscan25
Wasl
Itgb4
Ankrd13a
Plekha1
Flcn
Srxn1
Met
Ptdss1
Mterf3
Prdm10
Ube2b
Rpn2
Mroh8
Rmnd5a
Atp6v0c
Map7d1
Sash1
Cmc2
Cenpn
Psip1
Noct
Cilk1
Fam83b
Arhgef4
Tpt1
Diaph1
Ss18
Cdt1
Eea1
Cdca7l
Ccdc85c
Fbxo33
Bcl6
Dot1l
Zfp277
Dock4
Gipc1
Cenpp
Zfp219
Raly
2900026A02Rik
Sod2
Polg
Per2
Slc30a5
Fam3c
Atrnl1
Myl12a
Fermt1
Madd
Polr3g
Mblac2
Yrdc
1110065P20Rik
Fbxl14
Myo6
Slbp
Tmem41b
Ireb2
Letm1
Gramd2
Agap1
Prdx2
Fzd6
Agpat5
C030006K11Rik
Fer
Tjp2
Ss18l1
Psma7
Dock11
Mtmr14
Cd47
Rnf14
Akt2
Myl12b
Mindy2
Rita1
Ddx54
Cd164
Dnmt1
Tacc1
Atg101
Dap3
Prr3
Gnl1
Vwa1
Phrf1
Ppm1l
Ube2a
Aff1
Aph1b
Ei24
Cul2
Col16a1
Nup50
Eif4a3
Akap11
Tspan4
Polr2l
Bzw1
Prpf40a
Arl6ip6
Calm3
Slc35e2
Adnp
Fam149b
Ecd
Tardbp
Rhbdd3
Ewsr1
Hsf1
Bop1
Mmp15
Crtc1
Taf15
Sri
Ndrg1
2610507B11Rik
Ttc14
Bcl9l
Arhgef19
Rpl36al
Mgat2
Ssrp1
Susd6
Ptov1
Set
Micall1
Pip4k2b
Ephb2
Serpinb5
Pkia
Spc25
Spsb3
Nubp2
Tigd5
Eef1d
Tcp11
Rlf
Rusc2
Lsr
Fam187b
Marchf7
Mrs2
Tmem260
Supt4a
Hdac2
Uhrf2
Syvn1
Pard6g
B230219D22Rik
Epm2a
Prkci
Mdm2
Carhsp1
Apol8
Pank1
Tmco1
Cep63
Anapc13
Vwa2
Mfsd4b4
Zcchc2
Cenpe
Dst
Cln8
Mtch2
Unk
Gnb2
Glce
Sigmar1
Hsd11b2
Tmem175
Gak
Ndufb1
Cpsf2
Birc2
Plxna3
Fkbp3
Pdik1l
Rab21
Gtf3a
Smc3
Sec24a
Nprl3
Slc25a42
Fus
Tipin
Zfp385a
Mark4
Acp5
Zcchc14
Fam160a2
Plekhg1
Zmynd8
Fosl2
Fam227a
Cby1
Map4k2
Pygo2
Btg3
Eif4a1
Dhrs3
Bzw2
Ankmy2
Chst15
Prepl
Camkmt
Mef2a
Map7
Tas1r1
Nol9
Banp
Zfand3
2810021J22Rik
Lrp1
Iqank1
Fam83h
Esrp2
Dsc3
Flnb
Plekhh3
Zzz3
Pgs1
Cd151
Prkdc
Mcm4
BC005537
Eid1
Krt15
Cwc22
Msmo1
Usp34
Xpc
Lsm3
Usp20
BC005624
Ppp3cb
Fam162a
Ccdc58
Popdc3
Brd3
Cspp1
Cops5
Ak4
Dop1a
Rgs12
Smarcd3
Usp2
Arrdc2
Ankrd11
Fosl1
Ano6
Tst
Mpst
Bod1l
Puf60
Rraga
Timm23
Parg
Pik3c2b
Ddr1
Rpl35
Bnc1
Pacs1
Paxip1
Vwa7
Mapk14
Gna15
Lsm14a
Dedd2
Perp
Saysd1
Ap5b1
Fzd10
Dgat2
Cdiptos
Cdipt
Tpbg
Mcts2
Tbca
Zbtb2
Coro2a
Dis3l
Mysm1
Ptpn4
Parp6
Galnt10
Slc39a9
Erh
Cstb
Jade2
Calhm2
Nptn
Septin11
Tmem19
Ezr
Micos10
Srsf5
Tmpo
Bcl2l11
Irf6
Selenow
Man2a2
Top1mt
Ptprj
Mob2
Ift27
Vopp1
Frat1
Nphp4
Kcnab2
Frat2
Prep
Frmd6
Nr3c1
Aldh4a1
Epb41
Nktr
Rap1gap
Rbbp6
Scamp5
Gne
Map2k6
Bbs2
Zfp692
Kpnb1
Usp15
Edem1
Slc35e1
Zdhhc1
Crebrf
Lamp1
Fam53c
Fra10ac1
Stxbp4
Cox11
Casp2
Ppm1d
Golim4
Exo5
Tspan3
Hmgcll1
Atf7
Pfdn4
Laptm4a
Tnks2
Bbc3
Fam241a
Imp3
Arf3
Lancl2
Eif3b
Fmnl3
Lims1
Hdac1
Smarcc2
Cars2
Satb2
Zmym3
Fanci
Rps3a1
Rnasek
Atl2
Fam53a
Drg1
Lrpprc
Awat2
Rab40c
Birc6
Uchl3
Ets1
Ccdc71
Fxn
Tex264
Cd3eap
Myo5a
Haspin
Zfp513
Tpst1
Abcg2
Pknox1
Rtn3
Nmral1
Gabpb1
Mob3a
Izumo4
Ttll5
Erg28
Mrpl40
Hira
Actr3b
H3c15
H3c14
Dkk3
Inava
Septin7
P4ha1
Vamp4
Fbxo34
Ahdc1
Commd1
Taf9
Rad17
Ak6
Pdia3
Catsper2
Cdkl3
Dazap2
Inka2
Etfa
Ostf1
Nmrk1
Zfyve21
Xrcc3
Tpp1
Rgl2
Zranb1
Dennd4b
Uap1
Smyd4
Rpa1
Mprip
Srp9
Ankrd26
Abhd18
Gan
Mcc
Suv39h1
Lrp5
Kdf1
Gm42323
Smg9
Wasf1
Cdc40
Pnn
Nyx
Atrip
Ndufb6
Rb1
Pak6
Efnb2
Mgrn1
Znfx1
Atg12
Ap3s1
Hmg20b
Cfap77
Meis1
Clasp2
Cldn34c1
Mat2a
Get4
Rapgefl1
Ttc32
Epb41l1
Krt5
Gpr19
Mlst8
Micu2
Xpo1
Raver1
Sf3a2
Plekhj1
Crem
Sec62
Zfp563
Gpi1
Tbc1d17
Akt1s1
Atg16l1
Ppp1r14c
Fam117b
Celf1
Tada3
Arpc4
Lrp11
Ttk
Slc20a1
Abcg1
Map3k7
Xxylt1
Anapc11
Alyref
Cltc
Recql4
Lrrc14
Elmod2
Emd
Fdx1
Ctnna1
Spata5l1
Rnf38
Cacnb2
Zbtb7a
Pidd1
Lama3
Ung
Them6
Slc15a4
Galt
Lsm1
Bag4
Dcaf4
Atg16l2
Rel
Mrps7
Gga3
Cmtr1
Proser1
Nhlrc3
Phldb2
Phka2
Gbe1
Scamp1
Gpr108
Sdhaf1
Gnas
Fbxw4
Dohh
Rpl19
Nt5c3
Ccnl1
Rnf7
Ralgps1
Vgll4
Slc2a6
Prrt2
Srm
Wdr45b
Mlec
Cep128
Chuk
Mbtps1
Lactb
Zfp382
Picalm
Ccpg1os
Ccpg1
P2ry1
Phc2
Got1
Dicer1
Disp3
Matr3
Gm10037
Nectin3
Rhobtb1
A930033H14Rik
Bcl2l1
Tada2b
Ccdc96
Atp10a
Fabp5
Wnt7b
Ykt6
Znrf1
Kif2a
Mfsd8
Socs5
Spint2
Nipal4
Nsmce4a
Isy1
Aip
Tmem134
Sik2
Wrap73
Srsf10
Tcf25
Cotl1
Cdk12
Hspa4
Rap2b
Dhrs13
Prkag2
Stard4
Nrbp2
Elavl1
Bahd1
Yod1
Abr
Fam104a
D11Wsu47e
Cep170b
Stau1
Fam204a
Ppfia3
Wdr4
Ptcd3
Polr1a
Fbxl15
Adpgk
Vps26c
Mrps15
Zfp961
Rpl10a
Cebpg
Tle6
Mydgf
Qrich1
Ttll7
Wdr5
Mon2
Ubac1
Herc2
Tmem198
Chpf
Cds1
Ube2d2a
Ppib
Gpbp1
Trim24
Alox12
Zfp617
Yars2
Tmem165
Slc34a1
Ahctf1
Pradc1
Cct7
Mapkapk5
Stag1
Map4
Ccnj
Rab14
Cul3
Zpbp2
Fam167a
Sun1
Atf3
Elmo3
Coq2
Ruvbl2
Gys1
Shisa5
Phc3
Tec
Ltb4r2
Tnk1
Prrc1
Uros
Bccip
Ypel5
Hp1bp3
Ddhd2
Faf1
Eri3
Uggt1
Zfp516
Pebp1
Lage3
Urah
Ppp2r5e
Gtf2a1
Nfyc
Rmi1
Hnrnpk
Vmac
Ndufa11
Tubgcp3
Cenpb
Zdhhc5
Ttbk2
Hr
Tmem230
Fam219b
Sfrp1
Tsga10
Sdk1
Chd8
Rnase4
Ang
Ppm1g
Ccdc71l
9530077C05Rik
Anln
Slc46a3
Lrrc20
Zfp428
Gid4
Dnajc27
Cse1l
Plxna1
Dram1
Mtf2
Ube2d3
Clcn3
Secisbp2
Mtdh
Ggt6
Arhgap39
Rps19
Rab33b
Tubb4b
Edrf1
Atg5
Ptges3
Casp14
Suco
Zfp358
Irf8
Ctnnb1
Entpd7
Tmem183a
Tmco4
Ldb1
Coq9
Ciapin1
Frg2f1
Foxj3
Shld2
Glud1
Usp42
Eed
Mest
Nfat5
Zbtb21
Cmip
Snx21
Wdr77
Atp5pb
Rexo2
Nucks1
Gmcl1
Cct5
Atpsckmt
Spdye4b
Rbak
Xylb
Tpm1
Prdm11
Map3k5
Ahcy
Brf1
Mblac1
Cnot3
Arhgap11a
Cfap20
Rrbp1
Celsr3
Smarcal1
Syn1
Npc2
Isca2
Phf20
Dnaja1
Smpd2
Ppil6
E2f7
Smdt1
Dennd2c
Thap12
Osbpl9
Lrrfip2
Dbp
Stk11
Mt1
Poldip3
Large1
Polr2a
Trp53
Wrap53
Tmem104
Nat9
Nup93
Mcph1
Higd1a
Atxn7l3
Phf12
Cyp20a1
Btg2
Il1rl2
Dynll1
Clptm1l
Me2
Prkcz
Slc39a7
Rxrb
Txnl4a
Gm16286
Rev3l
Sez6l2
Asphd1
Bcar1
Pik3r3
Birc5
Fbxl2
Lpar3
Ezh2
Cdkn1a
Pim3
Ncbp2
0610012G03Rik
Lbr
Zmym5
Stk38
Fam110a
Dzip1
Acvr1b
Samd4b
Gmfg
Det1
Sptan1
Upf3a
Dnajb3
Dcps
Ptp4a1
Sf1
Sugp2
Armc6
Megf9
Flvcr1
Ascl2
Ppp1r36
Uqcrh
Lrrc41
Srf
Lsg1
Serf2
Pafah1b3
Traf2
Mfap3l
Derl3
Pbld2
Hnrnph3
Morc2a
Zfp784
Nupl1
Adam10
Slc11a2
Msh6
Cnnm3
Aktip
Pkp3
Spata33
Chmp1a
Ogdh
Eef2
Gga1
Pdcd6ip
Lrrc8b
Prpf40b
Acer2
Fchsd2
Mtres1
Adrm1
Slc25a4
Arf6
Dnajb1
Taf11
Anks1
Far1
E2f1
P4hb
Dgcr8
Cc2d1b
Ifrd1
Sprtn
Exoc8
Ltbr
Pgp
Abcf2
Hyal1
Ttll12
Tmem245
Ccng2
Sdf4
B3galt6
Acap2
Rabggta
Slc35a5
Atg3
Etv5
AI661453
1700001C19Rik
Ssbp1
Zfp821
Pithd1
Ncoa5
Agfg1
Tut7
Adss
Snx13
Grb2
Ttc7
Wdfy2
Pabpc1
Schip1
Zbtb8os
Rbbp4
Rmnd5b
Naa40
1110008P14Rik
Nomo1
Ttc9c
Hnrnpul2
Anks3
4930451G09Rik
Gtf2a2
Pank2
Arf2
Wdr91
Cltb
T2
Gnai2
Myh14
Arntl
Rpl22
Arid4a
Arrdc4
Sspn
Hyal2
Sp2
Fgd4
Flad1
Sec14l1
Brd2
Ap2m1
Rps29
Sharpin
Maf1
Top2a
Ankrd54
Mtss2
Eif2ak3
Cwc27
Ska2
Prr11
Tcp11l2
Rfx1
Abhd2
Rbm25
Hnrnpc
Get3
Ccser2
Dpp9
Slc39a3
Tepsin
Ndufaf8
Rnf5
Cnot1
Atp5b
Cenpu
Robo1
Tmem218
Ttll10
Ilf2
Rbbp9
Smim4
Dnm2
Rab5b
Osbp
Rpl27
Khsrp
Tcerg1
Ube2c
Tom1
G3bp1
Oxr1
Zfp24
Oasl1
Zfp869
Cic