ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Rfx1 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◣ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Fam227b
Dtwd1
Tmx4
Mks1
Xrcc1
Pinlyp
Ccdc30
Pofut2
Rfx1
Cfap298
Wdr90
Foxj1
E4f1
3110082I17Rik
Mthfr
Clcn6
Tctex1d2
1700030J22Rik
Zdhhc1
Wdr34
Tecpr2
Cinp
Ssbp2
Fam131a
Zc3h3
Jund
Gar1
Jam3
Mapre3
Rundc1
Ptges3l
Cenpf
Sde2
Saxo2
Efl1
Lsm10
Ncoa5
Lrrc56
Hras
Anks3
4930451G09Rik
Ccdc57
Ropn1l
Eaf2
Mok
Rtca
Pigx
Cep19
Sik3
Pafah1b2
Smpd2
Ppil6
Dnajc16
Mycbp
Ufsp2
1700029J07Rik
Dnttip1
Mafa
Map1a
Prkar1b
Dnaaf5
Dyrk1b
Ccdc181
Lrrc73
Oxnad1
Dph3
Cyp46a1
Eif2b2
Pnma1
Acap2
Fam204a
Fam214a
Pin1
Ube2o
Ubn2
Cfap20
Pold3
Dyrk1a
Cep112
Stk32c
Lrrc27
Dynll1
Dusp18
4921536K21Rik
Meig1
Tsga10
Cabin1
Wdr27
1600012H06Rik
Hsdl1
Dnaaf1
Ubxn6
Klhl18
Kif9
Lins1
Ift22
9530077C05Rik
Ccdc34
Tctn2
Ankrd13d
Sema4b
Mark3
Sik1
Mindy4
Cetn4
Bbs12
Tmem209
Ssmem1
Ebna1bp2
Cfap57
Ptdss2
Agtrap
Rlf
Orai3
Kif18a
Nup50
Arl6
Wdr78
Mier1
Pak4
Micos10
Rsph1
Kifbp
Otub1
Sf3a1
Nsmce1
Ccdc157
Ift57
Rer1
Morn1
Syt5
Trim2
Azin2
Wdfy1
Armc9
Dmwd
Gcc2
Tada2b
Ccdc96
Fbxw7
Nek2
Ap1s1
Dcp1b
Eif2s1
Atp6v1d
Bbs5
Map9
Dnajc10
Zswim1
Ywhaq
Usp30
Bdp1
Gtf3c1
D430042O09Rik
Nek11
Aste1
Irak1bp1
Samd4b
Gmfg
Trit1
Ccno
Cplane2
Rabl2
Dad1
Abhd4
Tsnaxip1
Ranbp10
Leng8
Ehd1
Map6
Morn2
Dhx57
Pcgf1
Rnf141
Ing1
Mib2
B9d2
H1f10
B9d1
Dnajc1
E2f8
1110051M20Rik
Marchf8
Chd4
Mapre2
Akap11
Prkcsh
Ccdc151
Tmem9
Rpl30
Cdk2ap2
Tubgcp3
Odf2
Csnk1g2
Per1
Traf3ip1
Stxbp4
Cox11
Dnajc25
Prepl
Camkmt
Shq1
Rpgrip1l
Fto
Ubxn2b
Prdm4
Josd2
Spout1
Sdcbp
Etfrf1
Casc1
Cfap74
Adgb
Tmem237
Nme7
Blzf1
Ctxn1
Sipa1l1
Ptges2
Cep162
Ppp1r16a
Etfbkmt
Bbs1
Crnkl1
Cfap61
Mpc2
Dcaf6
Cherp
Wdr31
Ralgapa1
Mast3
Tfip11
Taok2
Elmod2
Rfc5
Lmna
Ttll10
Rhbdd2
Ccpg1os
Ccpg1
Ccdc39
Tpm3
Smg7
Dync2li1
Zfp24
Sec61a2
Lyrm4
Fars2
Ppp2r1a
Itsn1
Cryzl1
Thnsl1
Enkur
Mink1
Mafg
Nucb2
Tmem167b
Rpn1
Ttc21a
Oscp1
Gorasp1
Txndc17
Sirt3
Psmd13
Nudt2
Kif24
Gtf2e2
Acox3
Tmem107
Cdk4
Ywhae
Pifo
Mbd4
Ift122
Hmgcr
Pold2
Capn10
Ubxn11
Mrpl10
Mlec
Lrrc46
Stk11ip
Fanci
Fank1
Dhx32
Lrguk
Hydin
Tmem138
Cyb561a3
Poll
Dpcd
Tube1
Fam229b
Cars
Dync2h1
Dcun1d5
Cfap65
Rhpn1
Agbl3
Rap2a
Psmc3ip
U2af2
Cdc37
Wdr7
Zfp688
Igsf11
Zfp523
Igsf9
Ankef1
Tbc1d32
Katnal2
Hspa12a
Eno4
Dagla
Wdr60
Ap1m1
Spice1
Ipo4
Cfap54
Eif4a3
Sun3
Gm11992
Naa40
Rpf2
Plch1
Chchd3
2900026A02Rik
Spata7
Ak1
Efhc1
Dym
Dusp6
Tasp1
Prr7
Dnah9
Cfap69
Map3k12
Sfi1
Efcab1
Arf3
Ccar2
Trip12
Prmt5
Fbxo36
Dyrk3
Cfap44
Ccdc184
Gtf2f1
Cnpy3
Klhdc9
Pkig
Cfap36
Pomt2
Maats1
Gstz1
Brms1
Ankrd54
Katnal1
Casp6
Hsph1
Pik3r2
Alkbh5
Lrrc6
P4ha1
Sclt1
D3Ertd751e
Spata24
Nap1l1
Mrps9
Snrpd2
Qpctl
Mtmr6
Ddx41
Iqce
Msmo1
Ankfy1
Pds5b
Chchd6
Tekt4
Iqca
Gde1
Intu
Klf2
Brd3os
Msi1
Pak1ip1
Bbs9
Zfp287
Ap3d1
Togaram1
Klhl28
Sf3b5
Ywhaz
Kif23
Tomm7
Mfsd4b4
Ift81
Slc25a3
Dpy19l1
Ccdc65
Rfx3
Cog7
Rnf5
Nbr1
Brca1
Lman2l
Mocs3
Dpm1
Phf20
Trub2
Spats1
Naga
Stoml2
Qtrt2
Ccdc191
Ddx24
Lca5l
4930505A04Rik
Zfp36l2
Pick1
Bub1
Thbs3
Mtx1
Sdccag8
Cep170
Dalrd3
Knop1
Iqck
Klhdc10
Fam98b
Cmtr2
Tex9
Arid4a
Fam151b
Srek1
Mlf1
Fndc11
Slc25a46
Hmgn2
Ccdc13
Prr3
Gnl1
Tmem231
Med9
Lrrc49
Rrp12
Celf3
Cluap1
1700037C18Rik
Slc25a14
Dffb
Cep104
Rrp7a
Tnpo1
Spg21
Rpl35a
Iqcg
Ppm1e
Cenpj
Dnaja1
Sec22c
Cfap410
Ttll13
Nsdhl
Cetn2
Afg1l
Rgl1
Arpc5
Sertad3
Derl1
Dynlt1b
Gpn3
Fam216a
Prkar1a
Ndufs5
Spag1
1700010I14Rik
Gnl2
Abi2
Cdc14a
Aopep
Cnot10
Ogfod2
Spata6
Slf1
2210408I21Rik
Ttll1
Rab36
Cipc
Hat1
Cacfd1
Phc2
Psma5
Timm10
Kiz
Setd4
Smc6
Gen1
Ccdc126
Abhd2
Tent5c
Zfyve28
Wdr35
Cfap99
Rsph14
Kti12
Fzr1
Arfip1
Trip4
Csnk1g1
Odc1
Dixdc1
Cyth2
Fasn
Tbcel
Kif6
Tmtc3
Cep290
Sgta
Fbf1
Copz1
Iqsec1
Zbtb48
Gm12500
Ampd2
Ptpn13
Tbc1d19
Iqch
Aagab
1700094D03Rik
Znhit1
Plod3
Cfap43
Ahi1
AI429214
Tedc1
Spef1l
Rnf40
Ccdc189
Actr6
Ttc26
Fam161a
Asb1
Mapk10
Spcs1
Glt8d1
Fam183b
Plin5
Myg1
Enkd1
4933405L10Rik
Gnaz
Rtl5
Pcsk1n
Dnal1
Npcd
Cbx6
Kcnip3
Cenph
Tdrp
Dner
Ap2a1
Nat14
Dusp3
Usp29
Peg3
Gemin8
Neurl4
2810408A11Rik
Psmd8
Dnaaf3
Lrriq1
Churc1
Map7
Efcab12
1700037H04Rik
Lrrc10b
Sec16a
Sfxn2
Arl3
Dlec1
Tpgs1
Ppm1g
Morn4
Tsen2
Spef2
Mzf1
Adgra1
Meak7
Stx8
Cfap52
Rab28
Skiv2l
Nelfe
Copb2
Rusf1
Trim39
Cdkl3
Pkd1
Erf
Kmt5c
Rab11fip2
Lrrc23
Ttll9
Ip6k2
Nek4
Ttc25
Foxo6
Dnal4
Repin1
Vps13a
Tspyl4
A930007A09Rik
Pyroxd1
Spata2
Rnf114
Slc9a8
Ttc30b
Zc2hc1c
Acyp1
Rsph4a
Ttll3
Pnkd
Fsip1
Mgat1
Tmem53
Armh1
Dhx16
Plec
Cdca4
Tmem216
Arl4a
Mns1
Ift88
Mypop
Kif3b
Klhl7
Orai2
Dnah11
Bbs7
Lmtk3
Fbxw9
Gmppb
Slc27a1
Hspbp1
Mrpl39
Ccnc
Pcnx4
Slc4a8
D5Ertd579e
Lmbrd1
Rfx2
D230025D16Rik
Tor3a
Zswim2
Wdr54
Ppp5c
1700003E16Rik
Mrpl22
Prkn
Pacrg
Dnajc7
Timm13
Nudc
Mapk15
Wdr19
Rpp38
Actr1a
Galk2
Cops2
Ttll5
Erg28
Ift172
Dnajb2
Nme5
Cystm1
Ndufa8
Morn5
Tctn3
Entpd1
Spef1
D130043K22Rik
Glb1l2
Pkp4
Ccdc148
Get1
Glipr1l3
Cbx5
Cxxc1
Tapbp
Fam227a
Cby1
Pef1
Chrm4
Calm2
Glipr1l1
Wdr17
Dlg4
Klf10
Cfap46
Mrpl58
Dstn
Ubl3
Fbxo16
Faap24
Ccdc107
Tmem218
Oxld1
Ccdc137
Zfp719
Ankrd42
Gdpgp1
Cib1
Fam90a1b
Apoo
Aspm
Eri3
Rfc1
Cep128
Nphp1
Hspa4l
Xrra1
Spcs2
Dennd2a
Stk35
Dnajc24
Mul1
Alms1
Wdr13
Kdm4a
Denn2b
Cwf19l2
Ppp1r7
Pask
Pbx4
Ssx2ip
Gpr137
Bad
Stx2
Lrriq3
Fpgt
Rnf32
Stox1
Eef2kmt
Lrif1
Akirin1
Zfp653
Stk16
Glb1l
Btrc
Qtrt1
Ccdc138
Ccdc113
Cfap20dc
Rtl6
Dnajc27
Stx18
Abl1
Tob1
Gpr19
Atp1a1
Peli1
Wdtc1
Kntc1
Polr2f
1700088E04Rik
Trim37
Nacad
Ift27
Cfap73
Bloc1s1
Cops3
Saraf
Crocc2
Tuba1a
Map3k14
Gas8
Uvrag
Yeats2
Spata17
Gpatch2
Smpd3
Camk2a
Ulk4
Entpd7
Jun
Nsmf
Eftud2
Ccdc103
Sppl2b
Lsm7
Gm973
2610301B20Rik
Tcp11
Cdkl1
Ccdc74a
Sorbs2
Tufm
Coq8b
Lekr1
Atf6
Ttc41
Hsp90b1
Arl2bp
1700016K19Rik
Zeb1
Phc1
Parp8
Dnajc15
Rpl22l1
Drc1
Xpr1
Usp20
BC005624
Fig4
Ak9
4930453N24Rik
Jakmip2
Otud5
Matk
E2f5
Wdr93
Pex11a
Qars
Med31
4930563E22Rik
Srfbp1
Wars2
Pspc1
Polr3h
Tmem17
Cfl1
Usp2
Wdpcp
Mdh1
Cfap77
Ttf1
Safb
Safb2
Cfap97d2
Edem3
Rps6kc1
Fkbpl
Tmem219
Tbc1d16
Clba1
Ccdc40
Catip
Ccdc180
Tspan3
Spaca9
Ak8
Zdhhc23
Fam219a
Dnaic1
Dynlt1f
Dynlt1c
Cibar2
Cep164
Dhx40
H13
Trp53bp1
Ift43
Ddx39b
Rsph9
Cpd
Nqo1
Mex3c
Zfp664
Ccdc92
2610524H06Rik
Zmynd10
Shoc2
Ccdc102a
Bbip1
Ap2b1
Nbas
Bclaf1
Zbed5
Tmem64
Ttll4
Myo10
Pex11g
Pnp
Fbxl2
Yipf3
Polr1c
Ift74
Fam167a
Spata33
Dcaf12
Chmp1a
Ap3m2
Fam110a
Rpl35
Fam76a
Tmem95
Pcf11
Naa20
Tubb4b
Whrn
Tent4a
Ptpn4
Tom1l2
Drc3
Mpc1
Tulp3
Nubpl
Iqcc
Pitpna
Cfap221
Ccs
Ccdc87
Nemp1
2410004P03Rik
Fez1
Gtf3c4
Brat1
Nfe2l1
Cfap58
Xylb
Klf4
Wwox
Ctnna2
Rpl24
Arf2
Hcn4
Tex26
Evi5l
Dnaaf2
Hsp90aa1
Coq3
Celf6
Rasal2
1700019D03Rik
Mtmr14
Actr1b
Pltp
Rfc2
1500009L16Rik
Spns1
Tmem108
Fam222a
Cacybp
Tsr1
Sgsm2
Zfp446
Igbp1
Zfp386
Prkar2b
Zfp512
Bud13
Cfap70
Eif5
Fam81a
Smarcad1
Tmed8
Samd15
Dipk2a
Timm21
Fbxo15
Sys1
Mfsd4b1
Cfap157
Tm9sf4
Tgfbrap1
AI597479
Znhit2
Dmxl2
Elp1
Bola1
Abitram
Tnks
Nav2
Tmed10
Otud3
Ip6k1
Mtr
Ift52
Arrdc4
Rps3
Srsf1
Nphp4
Kcnab2
Thop1
Foxn2
Ccnb2
Fam161b
Coq6
Braf
Pacrgl
Plxnb2
Pole3
4933430I17Rik
Negr1
Kif3a
Zfp407
Ndufaf4
Gatd1
Rae1