ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028798 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◣ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Rtn3
Gnai2
Inip
Flcn
Uqcrh
Lrrc41
Pip5k1c
Fam53c
Cln8
Gipc1
Aldh4a1
T2
Eed
Arntl
Cmc2
Cenpn
Phrf1
Cdk12
Nphp4
Kcnab2
Uchl3
Rita1
Ddx54
Ptcd3
Polr1a
Ptov1
Cenpe
Eif3b
Tcp11l2
Lrpprc
Nmral1
Med30
Rpl19
Ephb2
Calm3
Taf15
Septin11
Madd
Wdr77
Atp5pb
Get3
Denr
Cnot6
Cwc27
Mrps11
Mrpl46
Tardbp
Por
Cdiptos
Cdipt
Arid4a
Samd4b
Gmfg
Robo1
Cd3eap
Tbck
Aimp1
Rab28
Mlst8
Tst
Mpst
BC005537
Top2a
C1d
Miga2
Bzw2
Ankmy2
Nr6a1
Tada3
Arpc4
Lsg1
Prkdc
Mcm4
Rpl22
Hyal2
Gnb2
Myh14
Dgat2
Eif2ak3
Sash1
Pfdn4
Ift27
Arrdc4
Prkci
Ttll7
Slbp
Cdca7l
Galnt10
Ott
Gm15107
Gm15085
Mia2
Pkia
Tigd5
Eef1d
Tbc1d17
Akt1s1
Asah1
Qrich1
Limch1
Fam227a
Cby1
Smc3
Zfp821
Tmem260
Uros
Bccip
Camta1
Utp18
Mbtd1
Zfp27
Ndufb1
Cpsf2
Psip1
Rnasek
Zfp687
Ankrd13a
Git2
Fus
Cnot11
Paxip1
Atg12
Ap3s1
Cdt1
Dpp9
Wasf1
Cdc40
Sharpin
Maf1
Rhbdd3
Ewsr1
Abhd2
Mblac1
Fsbp
Srpk2
Ankrd54
Ptcd2
Mrps27
Frat2
Tmem198b
Dnajc14
Uchl1
Nol6
Pabpc4
Cct5
Atpsckmt
Ppt2
Frat1
Hap1
Oxr1
Fgd4
Selenow
Zswim4
Psma8
Mat2a
Slc36a4
Dohh
Mbnl2
Rmnd5a
Atg101
Noct
Pknox1
Atrnl1
Gripap1
Iqch
Aagab
Atp8a1
Pik3r3
Mgrn1
Raly
Jun
Tspan4
Polr2l
Rlim
Pias2
Pafah1b3
Them6
Ces2a
Ilf2
Uqcrq
Tcerg1
Smg8
Tll1
Cnot1
Hexim1
Fanci
Tnrc6b
Dut
Dedd2
Hdac2
Oxgr1
Prdm10
Dnmt1
Uba1
Lrch4
Bzw1
Paip2b
Map3k7
Ptdss1
Mterf3
Rel
Atp5b
Map7d1
Cfap77
Mis12
Derl2
Inava
Spsb3
Nubp2
Gpr108
Nectin3
Siah3
Ube2c
Stip1
Ltbp4
Kctd2
Atp5h
Cd164
Cdca8
9930104L06Rik
Mtch2
Hnrnpc
Cdc25c
Sp2
Polr2a
Rbbp9
Dnm2
Zfp94
Traf2
Tepsin
Ndufaf8
Eif4a3
Ppm1l
Abhd16a
Rbm39
Papln
Brd2
Cenpp
Wasl
Xrcc1
Pinlyp
Myl12a
Sspn
Smim4
Trp53
Wrap53
Nasp
Sdcbp
Actrt3
Timeless
Ccp110
Fchsd2
Tpbg
Sp1
Fos
Flad1
Rnf5
Col9a1
Rfx1
Fbln2
Mfsd13b
Cdr2
Srxn1
Mtmr14
Ttll10
Sgsm3
Rhobtb3
Zpbp
Krtap6-1
Cic
Akirin1
Cwc22
Katnb1
Paf1
Med29
Zfp869
Scamp5
Zfp580
Hcn1
Rab11b
Krcc1
Fxyd3
Fbxo33
Rusc2
Prkaca
Slc39a3
Ska2
Prr11
Atp6v0c
Psmd5
Sel1l
Ensa
Ccdc85c
Alox5ap
Sod2
Dmxl1
Fbxl14
Dbp
Nudt2
Kif24
Tacc1
Rps19
Frem3
Srgap2
Fam72a
Spdl1
H2-T9
H2-T22
Gm6034
Mvk
Mmab
Lsm6
Zfp219
Nlk
Khsrp
Rps7
Tmem94
Anp32e
Pramel51
Rnf26
Mtf2
Dot1l
Nfatc2ip
Timm17b
Pqbp1
Ugp2
Cspp1
Cops5
Atg16l2
Smarcal1
Kctd9
Cdca2
Nfe2
Plekhf2
Prickle1
Fam76a
Usp1
Ccnj
Ss18
Per2
Rbm15
Dgcr6
Slc25a20
Golph3l
Relch
Pign
Cul2
Rap2a
Rnpc3
Slit3
Pnpo
Wbp1
Abtb2
Plod2
Wdr62
Akt2
Zfp608
Mtss2
Tom1
Kmt5c
Hbp1
Slc25a25
Brat1
Ndrg2
Tmem218
Wasf2
Slc66a2
Dlst
Dusp12
Tcf12
Mrps10
Krt19
Nudcd2
Hmmr
Tctn2
Ift140
Cramp1l
Prdx2
Zfand3
Maco1
Kdm4a
A930018P22Rik
Fuz
Hnrnpr
Fzd2
Pip4k2b
Evi5l
Polg
Magel2
Ssrp1
Ezh2
Trim8
3110082I17Rik
Ivd
Arap1
Tcf19
Cchcr1
Nacc2
Immp1l
Elp4
Ddx41
Rpn2
Mroh8
Tle3
Copz1
Bsdc1
Cdc23
Dus1l
Ctps
Ap2m1
Stau2
Ireb2
Znhit3
Zfp607b
Psma2
Mrpl32
Map3k3
Snrpd3
Gucd1
Rspry1
Psme3ip1
Kmt2a
Ubald2
Zfp52
Hspa4
Sgms1
Dap3
Mapk14
Pxmp4
Zbtb3
Zfp599
Nckap5
Fam24b
Supt5
Prickle2
Dcc
Slc35e2
G3bp1
Hdac1
Tmx2
Med19
Tprn
Elmo2
Cep135
Lars
Tedc1
Isoc2b
Ngdn
Akap11
Zfp574
Ankhd1
Zdhhc5
Hint2
Erg
Lum
Hexim2
Ppp6r3
Chd6
Armc1
Wnt10b
Lyzl1
H2-DMb1
Folr2
Arf4
Rtkn
Sptlc2
Prmt1
Shisa5
Lyrm7
Ube2b
Nvl
Sarnp
Ormdl2
C330007P06Rik
Gm3667
Pmpcb
Rraga
Faap24
Lca5
Cemip
Kat6b
Ak1
Tbcb
Polr2i
Sorbs2
Phldb1
Pan2
Wdr27
1600012H06Rik
Yipf2
Timm29
Siah1b
Ankfy1
Poc5
Diaph1
Arl2
Rnf181
Osbp
Ints4
Xab2
Pet100
Stat3
Lratd1
Apc2
Rbm25
Cct8
Stt3a
Fdft1
Rcl1
Gpsm2
Cdc45
Heatr1
Gtpbp3
Trim45
Fdxr
Mxd4
Dcaf15
Mterf2
Trappc11
Rwdd4a
Psat1
Rbbp6
Atf7
Msantd4
Cd1d1
Ctla4
Wwox
Dapk3
Rpl27
Got1
Gtf2b
Tars
Ticrr
P4hb
Mon1b
Hip1
Timm10
Tomm40
Gcdh
Glrx5
Srp68
Pum3
Ric8b
Mfsd8
Rpp38
Traf7
Psmb3
Arhgap11a
Nmt1
Mospd3
Chgb
Npm1
Ppm1b
Zfp317
Arf2
Islr
Pin1
Ap2a1
Acaa1a
Zfyve21
Xrcc3
Chmp3
Fam76b
Cep57
Abhd18
Rab40c
Mest
Alyref2
Zbtb40
Jag2
Lrrc56
Hras
Ndst2
Sec14l1
Cbr3
Bcl6
Rps27l
Rps29
1700016H13Rik
Fam20b
Phlda3
Ccser2
Tecpr1
Pa2g4
Cenpu
Evpl
Nt5c3
Rab5b
Inka1
Plekha1
Tmem41b
Tjp2
Arhgef4
Zfp24
Zscan25
Oasl1
Mrpl21
Ighmbp2
Sigmar1
Itgb4
Aig1
Fam149b
Ecd
Prpf40a
Arl6ip6
Fkbp3
Cltc
Sh3kbp1
Sfi1
Ttc14
Styxl1
Mdh2
Susd6
Rab21
Spc25
Klk10
Zcchc14
Gm5165
Isy1
Spty2d1
Slc30a5
Tcp11
Arhgap19
Frmd6
Med23
Cilk1
Aph1b
Mdm2
Proser1
Nhlrc3
Letm1
Mrps31
Glce
Fam204a
Haspin
Banp
Slc29a1
Fam3c
Adnp
Zfp748
Xpc
Lsm3
Zxdc
Arhgef19
Ube2d3
Aff1
Ddx56
Mrpl1
Kpnb1
Hnrnpa2b1
Cbx3
Zmynd8
Mia
Fer
Knl1
Ints10
Myl12b
Mrpl30
Mitd1
Usp20
BC005624
Pmaip1
Wdr36
Serpinb5
Ss18l1
Psma7
Mrpl44
Slc25a42
Meis1
Bbs2
Tpt1
Eea1
Uvssa
Abhd1
Fam83b
Glo1
Palb2
Dctn5
Dffb
Cep104
Dhrs13
Lamp1
Dcps
Cnot3
Ttc41
Hsp90b1
Zfp386
Tfg
Zfp277
Dock4
Sgms2
Ist1
Lama4
Sppl2a
Emp1
Ube2a
Crtc1
Plekhg1
Micall1
Rgs3
Fut10
Scn4b
Pnn
Dhx33
Rab33b
Adgrv1
Slc39a10
Znhit1
Plod3
Tubb4b
Pou2af1
Utp3
Wdfy2
Chordc1
Spata17
Gpatch2
Mob1a
Met
Dst
Gm51425
2900026A02Rik
Tut4
Sri
Fosl1
Dcp1a
Rnf14
Cd47
Mef2a
Drg2
Lancl2
Eif3f
Commd1
Vwa1
Myo6
Tut1
Nuf2
Get4
Cstf2t
Stxbp4
Cox11
Nup54
Krr1
Anapc5
Kdsr
Snrnp200
Mindy2
1810024B03Rik
Polr3g
Mfsd4b4
Mblac2
Bod1l
Mast2
Uhrf2
Opa1
Pygo2
Ndrg1
Hars
Hars2
Sacm1l
Chchd2
Sphk2
Rpl18
Trib1
Ptger1
Ube2j2
Gbf1
Fem1b
Cdyl
Exosc4
Srp19
Cep63
Anapc13
Nedd4
Rptor
Cipc
Mtres1
Arid1a
Cyth2
Tanc1
Dnajc16
Lrriq3
Fpgt
Slc33a1
Zbtb5
Nufip1
Gpalpp1
Esyt2
Gatad2a
Zfp143
Kdm4b
Tipin
Sec14l2
Zfp691
Mcm3
Ube2f
Chadl
Ssbp1
Mideas
Eapp
Smim14
Galk2
Cops2
Pkn3
Fubp1
Dnajb4
Birc2
Rgl2
Ahctf1
Echdc3
Zfp668
Sun1
Mocs3
Dpm1
Polq
Septin7
Nucb2
Calcoco1
Tmem101
Bms1
Syn1
Spring1
Rnft2
Get1
Gas7
Scamp1
F13a1
Pabpn1
Zzz3
Jpt2
Zfp513
Il18
Ddost
Bco2
Cyth1
Ndufs7
Kifc5b
Agbl5
Rnase10
Fzd6
Kansl2
Tom1l2
Drc3
Zfp654
Cggbp1
Vta1
Zfp180
St6galnac6
Psmb2
Rps3a1
Ss18l2
Hes2
Opa3
Cops4
Tiam2
Creld2
Alg12
Tspyl1
Htra2
Aup1
Fra10ac1
Snrpc
Canx
Agpat5
Zfp101
Ppil3
Nif3l1
Fbh1
Ankrd16
Lsr
Fam187b
Ltbp1
Egr2
Vamp4
Rrp15
Rtn4
Cnot8
Acp2
Aars
Slc25a45
Vps51
Hdac10
Znrd1as
Znrd1
Ddx17
Rbbp5
Gramd1b
Tma16
Pradc1
Cct7
Calm1
Zfp961
Snx12
Ap1g1
Syvn1
B230219D22Rik
Rpl36al
Prr3
Mgat2
Gnl1
Zbtb2
Myh10
Hsd17b12
Usp2
Atp5g1
Actr3
Postn
Timm22
Pex3
Nop14
Hsf1
Grk4
Bop1
Adat2
Cgref1
Creb5
Prcc
Pcdh9
Tfcp2
Phf12
Sulf1
Dad1
Abhd4
Wdr92
Pno1
Fbxo31
Sox6
Aox1
Tulp4
Ppp1r11
Ibtk
Cfap298
Txnip
Gm6712
Ugdh
Agap1
Rps6ka5
Ppp6c
Ap4e1
Zfp563
Vps28
Marchf7
Smarcd2
Lyrm1
Dcun1d3
Dcaf7
Trp53rkb
Mettl25
Gcnt2
Ccdc59
Ttbk2
Nbr1
Klhl26
Cflar
Brca1
Slc43a3
Ddx20
Unk
B4galt7
Luc7l2
Npc2
Nelfa
Mtmr6
Kansl3
Isca2
Herc2
Cox7a2
Txnl4b
Dhx38
Top1mt
Ctnnd1
Ogfod1
Nudt21
Mlec
Cul1
Fam160a2
Gm12258
Tex14
Ift22
Pcbp2
Tas2r134
Pdk2
Pip4p1
Tcf3
Retsat
Elmod3
Panx3
Nme1
Grk5
Micos10
Dnajc24
Klhl20
Gins2
Prepl
Ift46
Fbxl15
Camkmt
Rara
Msmo1
Lig4
AW549877