ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035108 | Chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◣ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Sec14l1
T2
Klk10
Mtss2
Gnai2
Myh14
Aig1
Rbm25
Nt5c3
Nacc2
Ap2m1
Rpl27
Ccser2
Sppl2a
Sh3kbp1
Slc29a1
Brd2
Dhrs13
Tut4
Tanc1
Fgd4
Mrps31
Mast2
Lsg1
Fam53c
Rpl22
Phrf1
Ttll10
Emp1
Arf2
Denr
Dohh
Ss18l2
Prf1
Arntl
Arhgap19
Ankrd54
Ptger1
Gm973
Zfp24
Sgms2
Gramd1b
Uqcrh
Lrrc41
Ltbp1
Tmem144
Abhd1
Tjp2
Dhx33
Slc25a45
Lama4
Prss53
Ddx56
Echdc3
Cgref1
Sulf1
Sec14l2
Rnase10
Ppil3
Nif3l1
Arrdc4
Prkdc
Mcm4
Top2a
Cdyl
Cenpu
Wdr36
Uvssa
Tiam2
Slc39a14
Il18
Bco2
Aox1
Dok5
Ibtk
Pkn3
Nvl
Gfpt2
Zfp386
Inf2
Fem1b
Dtx1
Chordc1
Eif3f
Polg
Krr1
Utp3
Fam107b
Mrpl1
Mrpl21
Ighmbp2
Isy1
Mad1l1
Aldh4a1
Sox6
Spty2d1
Zfp748
Vta1
Tfg
Taf15
Mest
Ift27
Znhit1
Plod3
Rtn4
Nfatc2ip
Sp2
Tmem218
Adamtsl4
Slc39a3
Ppp2ca
Tmem41b
Gm829
Hnrnpc
Adgra1
Med23
C77080
Tcerg1
Cic
Pdzrn4
Dcp1a
Vps28
Exosc4
Drg2
Ngef
Mrpl30
Mitd1
Ska2
Prr11
Arid4a
Ptcd2
Mrps27
Rnf5
Lrpprc
Rita1
Ddx54
Ints1
Hdac10
Tardbp
Flad1
Sun1
Timm10
Anapc5
Hyal2
Aadacl2
Khsrp
Cstf2t
Madd
Ube2f
Psmd3
Eed
Tut1
Dusp12
Ppp6c
B4galt7
Dhx32
Prcc
Rbbp9
Ints10
Snrnp200
1810024B03Rik
Ndufv1
Wwox
St6galnac6
Nedd4
Nkd1
Kdsr
Rfx1
Fam149b
Ecd
Slc35d1
Rab11b
Mat2a
Rps7
Calm3
Ric8b
Smg8
Pou2af1
Zfp869
Gnb4
Gm5165
Tmem101
Ap4e1
Panx3
Marcksl1
Cln8
Slc35e4
Glo1
Mideas
Galk2
Cops2
Atg101
Ddx20
Wdfy2
Trub2
Rab21
Trib1
Zbtb40
Gucy2g
Mrpl44
Mdc1
Fdxr
Gtf2h4
Knl1
Htra2
Aup1
Hexim2
Mcm3
Snrpc
Nelfa
Ing4
Dhx8
Rptor
Creb5
Mgp
Fam180a
Mia
Rgs3
Zfp738
Ist1
Iqch
Aagab
Cct8
Zbtb2
Srp19
S100a10
Cdt1
Ppp1r11
Pole2
Atg12
Ap3s1
Slc33a1
Rhoq
Dad1
Abhd4
Dhx16
Hdac2
Get1
Dnajc16
Gcnt2
Socs1
Proser2
Krt13
Atp5b
Nuf2
Sertad4
BC049762
Bms1
Rtn3
B3gnt5
Gjb4
Prkci
Armc1
Acp2
Txnl4b
Dhx38
Ndufv2
Col9a1
Sphk2
Rpl18
Wdr92
Pno1
Mtmr2
Rab5b
Osbp
Cldn10
Ube2j2
Yipf2
Timm29
Map9
Tmem260
Dffb
Cep104
Nop14
Grk4
Diaph1
G3bp1
Kifc5b
Rbm34
Mtmr6
Ptov1
Postn
Ing3
Krtap1-5
Cltc
Hal
Eif3b
Ugdh
Mmachc
Ccdc163
Por
Katnb1
Banp
Prrg2
Nosip
Xpo7
Dpp9
Acot7
Lrriq3
Fpgt
Ssbp1
Alg14
Btbd9
Arid1a
Rcan1
Ints4
Sgcd
C2cd5
Krt16
Ubxn10
Arhgap11a
Nufip2
Dhrs9
Tulp4
Txndc2
Nup54
Ruvbl1
Filip1
Lzts2
Stard13
Ahcyl2
Slc39a2
Trp53rkb
Gipc1
Eif2ak3
Znhit3
Zbtb5
Atp5g2
Ndufs2
Xab2
Pet100
Rps12
Micalcl
F13a1
Dnajc24
Alx1
Dut
Ndufb1
Cpsf2
BC005537
Opa1
Egr2
Gm13290
Gm13289
Gm13285
Gm13288
Tnfaip6
Cdc25c
Sirt2
Nfkbib
Mfsd8
Ddost
Dnm2
Tma16
Megf8
Cela1
Top3b
Dars2
Rdm1
Ngdn
Hip1
Kctd5
Rpl38
Timm22
Cacng2
Bdkrb2
Uchl3
Nfe2l1
Ost4
Rangap1
Cdk12
Dus1l
Rrp15
Timm21
Fbxo15
Xylt1
Mlst8
Tmem94
Zfp317
Cmc2
Cenpn
Cops4
Ifnz
Hsd17b12
1110051M20Rik
Rab11fip3
Cxcl2
Cbx5
Cops8
Mt2
Gkn3
Fut10
Med4
Sh2d1b1
Stat3
Rbbp5
Yap1
Gbf1
Cetn4
Bbs12
Zscan22
Pde12
Evi5l
Colgalt2
Taco1
1600014C23Rik
Ttc1
Sec22b
Chchd2
Vps51
Sf3a3
Cdca8
9930104L06Rik
Clcn3
Rrm1
Klhl20
Sf3b2
Tox4
Rab2b
Spata13
Kifap3
Pafah2
Rmc1
Haus6
Dnmt1
Get3
Cct5
Atpsckmt
Kmt5c
Smarcal1
Slc41a1
Cd3eap
Lrrfip1
Ndufs7
Hk2
Sfxn3
H1f8
Loxl1
Nol6
Sh3gl1
Daam1
Psmb3
Ruvbl2
Gys1
Aplf
Kifc1
Hars
Hars2
Mrpl34
Abhd8
Prkcsh
Ccdc151
Galnt10
Gpsm2
Esyt2
Cacybp
Tti2
Spata1
Gng5
Pin1
Rpl3
Lrrc51
Tbc1d10b
Mylpf
Pafah1b3
Brwd3
Slc45a4
Nme1
Rmnd5a
Ddx18
Gosr1
Glrx5
Tcf3
Trp53rka
Npc1
Gm3776
Cradd
Slc6a12
Cdiptos
Cdipt
Glce
Polq
Plekhf2
Prmt5
Rpl19
Dtnb
Nfkbil1
Atp6v1g2
Rsbn1
Zfp747
Ylpm1
Bmf
Dusp22
Ncmap
Cipc
Zfp35
Chchd3
Cenpp
Poglut2
Bivm
Lars
Bod1l
Lrig2
Prdm10
Xrn1
Slc39a13
Frg1
Diras2
Gale
Hoxa5
Zfp385b
Tepsin
Ndufaf8
Tcea1
Tm9sf4
Zfp408
Tsc22d3
Tigd5
Eef1d
Uqcrc1
Kcnn4
Retsat
Elmod3
Zfp719
Pate1
Jmjd1c
Cox14
Srp68
Irgq
Emsy
Paip2b
Cast
Riok2
Hspg2
Mdm4
Atp5g3
Gcnt4
Zfp180
BC003965
Wdr24
Pxmp4
Cnpy2
Tpm2
Lgals2
Gtpbp3
Shb
Selenok
Arid4b
Pcnx3
Map3k11
Zfp472
Smim4
Cyth2
Mapre2
Abhd2
Limch1
Pigu
Herpud2
Ddx24
Sharpin
Maf1
Uqcrq
Yars
S100pbp
Pigm
Fubp3
Ccn3
Iftap
Cd2bp2
Wdr77
Atp5pb
Pex3
Adat2
Ints12
Gstcd
Ppme1
C2cd3
Txn2
Mob1a
Nudt15
Ciao3
Ilf3
Crybg1
Nsfl1c
Ndufaf1
Cmtm3
Abhd18
Phb
Pigc
4930558K02Rik
Fyco1
Ilf2
Pafah1b2
Clcf1
Glrx
Mblac1
Ap3s2
Abcf2
Rint1
Sigmar1
Rtkn
Cox7a2
Msantd4
Mtg1
Fam168a
Pik3r3
Copz1
Ints9
Hmbox1
Chchd5
Cwc22
Zxdc
Trim41
Zfp729a
Rab27b
Rpl26
Elp5
Ctdnep1
Pmepa1
Tspan9
Fam227a
Cby1
Poldip3
Exoc5
Ap5m1
Tesk2
Rab3gap2
M6pr
Itih5l-ps
Rpa2
Slc35b1
Gm51425
Tmem160
Gpatch3
Gtpbp8
Ankrd13a
Tmem242
Bbs5
Lrch4
Proser1
Nhlrc3
Ctnnd1
Nudt2
Kif24
Zfp560
Exosc5
Bckdha
Ttll7
Zfp607b
Ptrhd1
Cenpo
Sult2b1
Rbm15
Ddit4l
Pabpn1
Pcbp2
Ubald2
Fbxo11
Ttc14
Ap2a1
Ccz1
Ccdc174
Arhgef40
Stip1
Zfp574
Pdzd9
Rps19
Nqo1
Spns1
Fbxo30
Lgi3
Med6
Nudt5
Cdc123
Krt87
Plekhb1
Fat3
Dapk3
U2surp
Polr1b
Clpb
Zpr1
Anxa7
Sarnp
Ormdl2
Eloc
Zfp959
Tle3
Leng8
Neil3
Zbtb10
Yju2
Ambra1
Flcn
Spsb3
Nubp2
Gtf3c6
Ticam1
Sgms1
Vps50
A130010J15Rik
Cwc27
Sp1
Trim44
Zbtb3
Commd2
Rpl36a
Tacc2
Scaf11
Them6
Rel
Sacm1l
Kat7
Tmed2
N4bp2l2
Rab40c
Qtrt2
Ccdc191
Tesk1
Tmf1
Sema6a
Anxa5
1810062G17Rik
Map3k3
Gpn3
Fam216a
Mlf2
Sdhaf3
Uhrf1bp1l
Prpf18
Ap1g1
Mettl25
Ccdc59
Tmem167b
Mitf
Tst
Mpst
Pknox1
Faap24
Snrpd3
Gucd1
Ncam1
Klhdc4
Nek4
Sugct
Mplkip
Ifitm2
Napg
Gstp1
Stoml2
Zfp687
Fra10ac1
Gpatch8
Psmg3
Fbxl19
Clint1
Ptcd3
Polr1a
Camta1
Cd38
Cdc42ep5
Slc35a1
Cbwd1
Xpc
Lsm3
Ccdc107
Aars2
Robo1
Ino80b
S100b
Itga10
Ift140
Cramp1l
Gfra1
Cand1
Camk1d
Mre11a
Ankrd49
Zfpl1
Cdca5
Eaf2
Eapp
Spring1
Rnft2
Zfp595
Kdm4d
Cwc15
Prkaca
Zfp101
Trim45
Atf6
Srgap2
Fam72a
Tomm40
Eif4e
Vim
Wbp11
BC049715
Gins2
Clns1a
Gas7
Tpp2
Septin11
Dgat2
Phf12
Snx17
Eif2b4
Sipa1l1
Bmpr1b
Otud3
Acox2
Hbp1
Mnat1
Ddx10
Fmn1
Etfdh
4930579G24Rik
Nudcd1
Eny2
Tbc1d17
Akt1s1
Pex5
Pip4p1
Rtraf
Ufl1
Uckl1
Strip1
Ube2q1
Rab33b
Nudcd2
Hmmr
Mettl18
BC055324
Slc14a1
Cd109
Ttc4
Ankrd39
Tfpt
Prpf31
Psmd1
Dusp23
H4c6
Palb2
Dctn5
Rap2a
Ndufaf7
Cebpz
Ptbp1
Lsm4
Gm13287
Rab6a
Tax1bp1
Erv3
Tada3
Arpc4
Rps26
Kbtbd7
Josd2
Elp3
Dap
Got1
Wdpcp
Mdh1
Dcstamp
Atp6v0a1
Gstm1
Paxip1
Actr3
Ogt
Thoc1
Rnh1
Ptdss1
Mterf3
Rnf216
Zfp384
Agbl5
Znrd1as
Znrd1
Fitm2
Pemt
Mrpl11
Prpf40a
Arl6ip6
Lgals3
Afg1l
Ftsj1
Usp31
Rbm28
Tssc4
Soat2
Hjurp
A730008H23Rik
Fnbp4
Cdk11b
Gatb
Flrt3
Arhgap40
Zswim4
Slc25a25
Vrk1
Lsr
Fam187b
Ccar1
Cdk5rap1
Snrpe
Fan1
Tgfb3
Tlcd1
Zfp444
Evpl
Anp32e
Clu
Stx18
Ccar2
Phb2
Emg1
Angptl4
Mtf2
Fchsd2
Pole3
4933430I17Rik
Gm13275
Snd1
Ralgds
Ywhag
Poc5
Map4
Ppp1r37
Slc35b4
Polr2m
Hapln1
Spdye4b
Rbak
Leprot
Sirt4
Ncbp3
Xrcc5
Mrps10
Bpgm
Cnot1
Tctn2
Map3k4
Fbxo4
Clptm1
Ctnnal1
Siah1b
Gne
Paf1
Med29
Mrpl3
Nsa2
Gfm2
Tmem270
Mocs3
Dpm1
Srpk2
Rttn
Lin52
Aldh6a1
Mdh1b
Fastkd2
H4c14
Capg
Ppm1b
Sgsm3
Kpna3
Gm13272
Zfp335
Mrpl39
Fam185a
Ccdc146
4930453N24Rik
Usp5
Cdca3
Lypla2
Zfp422
Fkbp3
Mis12
Derl2
Cluap1
1700037C18Rik
Pan2
Rpl29
Med27
Vill
Nufip1
Gpalpp1
Tom1l2
Drc3
Kntc1
Apol7a
Dcps
Cnot10
Gtf2a1
Amz2
Uba3
Pla2g2e
Cpsf1
Scin
Clcn5