ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028800 | Embryonic gonad
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◣ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Wdr77
Atp5pb
Ptcd3
Polr1a
Rpl19
Calm3
Cdk12
Ift27
Pknox1
Qrich1
Pik3r3
Phrf1
Arntl
Arid4a
Sharpin
Maf1
Pfdn4
Septin11
Tcp11l2
Tada3
Arpc4
Fus
Lrpprc
Cmc2
Cenpn
Cdiptos
Cdipt
Get3
Prkdc
Mcm4
Gipc1
Uchl3
Mat2a
Top2a
Dgat2
Taf15
Denr
Flad1
BC005537
Tigd5
Eef1d
Inip
Cenpe
Uqcrh
Lrrc41
Hyal2
Mblac1
Tardbp
Mlst8
Dut
Psmd5
Eif3b
Ptcd2
Mrps27
Nr6a1
Dnm2
Cnot6
Por
Camta1
Rita1
Ddx54
Hexim1
Mgrn1
Dohh
Tepsin
Ndufaf8
Ap3m2
Mfsd13b
Cdr2
Prkci
Slc39a3
Wdr27
1600012H06Rik
Gnb2
Tctn2
Zswim4
Aldh4a1
Tmem218
Arrdc4
Mrps11
Mrpl46
Jun
Ppm1l
Lsg1
Atg101
Slbp
Tbc1d17
Akt1s1
Nphp4
Kcnab2
Cnot1
Sp2
Mia2
Dpp9
Dnmt1
Sash1
Styxl1
Mdh2
Tom1
Rhbdd3
Ewsr1
Ube2d3
Uros
Bccip
Fam227a
Cby1
Smim10l1
Hnrnpc
Cln8
Eif2ak3
Abhd2
Ube2c
Tmem260
Atp5b
Mapk14
Asah1
Eed
Ptdss1
Mterf3
Wasf1
Cdc40
Ankrd54
Prmt1
Rmnd5a
Atrnl1
Noct
Zfp27
Rbm39
Uhrf2
Gm12258
Gpr108
Traf2
Arap1
Prkaca
Ttll7
Psip1
Ankhd1
Pkia
Oxr1
Elavl2
Eif4a3
Rpl22
Ttc41
Hsp90b1
Cdc25c
Fam76a
Ndufb1
Cpsf2
Ptov1
Tst
Mpst
Selenop
Rnf5
Samd4b
Gmfg
Nucb2
Cep135
Ncoa2
Map7d1
Naa35
Slc25a4
Hydin
Smc3
Frat1
Nudt2
Kif24
Rtn3
Nectin3
Ankfy1
Pafah1b3
Mvk
Mmab
C1d
Selenow
Rps6ka5
Fbxo33
Aars
Bcl6
Pin1
Siah1b
Nsun3
Lrch4
Fanci
Rps7
Tspyl1
Pias2
Glrx5
Tmem198b
Dnajc14
Hdac2
Kmt5c
Chd6
Ccdc85c
Raly
Tmbim6
Per2
Tcerg1
Paip2b
Kctd2
Atp5h
Usp1
Rpl12
Lrsam1
Robo1
Pxmp4
Cwc27
Hspa4
Polg
Tnrc6b
Pan2
Med30
Nol6
Cd164
Srpk2
Rab28
Zbtb40
Rab5b
Timm17b
Pqbp1
Tipin
Fchsd2
Fubp1
Dnajb4
Atf7
Sel1l
Zswim1
Mtmr14
Gm5165
Atp8a1
Khsrp
Eif5
Mob1a
Ift22
Actr1a
Madd
Cenpp
Cic
Rnpc3
Oscp1
Fam204a
Stip1
Cfap77
Timeless
Tmem209
Ssmem1
Utp18
Mbtd1
Pip4k2b
2610008E11Rik
Kat6b
Fdft1
Kansl2
Rpp38
Iqch
Aagab
Zfp687
Lamp1
Sipa1l1
Canx
Sarnp
Ormdl2
Isoc2b
Add1
Sec23ip
Hdac1
Gripap1
Spsb3
Nubp2
Nudt1
Abhd16a
Ska2
Prr11
Mis12
Derl2
Trp53
Wrap53
Kdm4b
Zfp691
Myl12a
Pycr2
Micos10
Srgap2
Fam72a
Ephb2
Cct5
Atpsckmt
Psmb2
Miga2
Wdr6
Paxip1
Prpf40a
Arl6ip6
Uba1
Rraga
Immp1l
Elp4
Rlim
Uqcrq
Scamp5
Supt5
Zfp574
Hint2
Anp32a
Srarp
Stxbp4
Cox11
Hnrnpr
Edrf1
Maco1
Pip5k1c
Uchl1
Galnt10
Wbp1
Rbm15
Bpgm
Acat2
Ankrd13a
Zfyve21
Xrcc3
Bub1
Pold4
Frem3
Ttbk2
Prdm10
Smarcal1
Dcaf11
Ss18
Nudcd2
Hmmr
Flcn
Recql
Golt1b
Rpusd3
Rbm27
Relch
Pign
Cemip
Rps19
Tbccd1
Dnajb11
Palb2
Dctn5
Zbtb5
Ensa
Xrcc1
Pinlyp
Naa38
Cyb5d1
Zfand3
Zfp143
Hbp1
Katnb1
G3bp1
Tubb4b
Kdm4a
Dcaf7
Sp1
Rcl1
Narf
Zfp869
Rpn2
Mroh8
Glce
Ppp6r3
Ap2a1
Rfx1
Psmb3
Orai3
Ppm1b
Dcps
Kctd9
Cdca2
Gatad2a
Dbp
Ubald2
Osbp
Evi5l
Rab11b
Sult6b2
T2
Jag2
Fam53c
Gnai2
Myh14
Akirin1
Kmt2a
Atg12
Ap3s1
Dlst
Sspn
Lrrc56
Hras
Ndst2
Sod2
Fgd4
Wasl
Diaph1
Sec14l1
Cbr3
Brd2
Ap2m1
Rps27l
Rps29
1700016H13Rik
Mtss2
Zfp219
Ube2b
Arl2
Fam20b
Cd3eap
Bzw1
Srxn1
Cdca7l
Bzw2
Ankmy2
Rbm25
Atp6v0c
Phlda3
Ccser2
Mtf2
Cdt1
Nmral1
Rnasek
Tecpr1
Pa2g4
Cenpu
Evpl
Akt2
Nt5c3
Ttll10
Ilf2
Rbbp9
Smim4
Rpl27
Cul2
Slc35e2
Them6
Inka1
Plekha1
Fbxl14
Tmem41b
Tjp2
Dot1l
Arhgef4
Cspp1
Cops5
Mfsd8
Zfp24
Zscan25
Frat2
Oasl1
Mrpl21
Ighmbp2
Sigmar1
Itgb4
Aig1
Fam149b
Ecd
Wwox
Atg16l2
Rbbp6
Nfatc2ip
Fkbp3
Limch1
Cltc
Sh3kbp1
Sfi1
Sgms1
Rusc2
Ttc14
Susd6
Rab21
Spc25
Klk10
Dap3
Rel
Zcchc14
Abhd18
Isy1
Spty2d1
Slc30a5
Cwc22
Tcp11
Arhgap19
Tle3
Nacc2
Frmd6
Med23
Git2
Cilk1
Aph1b
Smg8
Mdm2
Proser1
Nhlrc3
Ireb2
Letm1
Mrps31
Dedd2
Cdca8
9930104L06Rik
Tspan4
Haspin
Banp
Slc29a1
Fam3c
Adnp
Hexim2
Zfp748
Armc1
Xpc
Lsm3
Zxdc
Cct8
Tacc1
Nlk
Zdhhc5
Arhgef19
Polr2l
Aff1
Ddx56
Mrpl1
Ppt2
Kpnb1
Hnrnpa2b1
Cbx3
Zmynd8
Mia
Fer
Knl1
Polr2a
Mtch2
Ints10
Myl12b
Mrpl30
Mitd1
Ngdn
Arf2
Usp20
BC005624
Pmaip1
Wdr36
Serpinb5
Ss18l1
Psma7
Rab40c
Mrpl44
Slc25a42
Meis1
Bbs2
Tpt1
Eea1
Uvssa
Abhd1
Slc36a4
Fam83b
Glo1
3110082I17Rik
Dffb
Cep104
Dhrs13
Lars
Cnot3
Slc25a25
Stt3a
Ssrp1
Zfp386
Tfg
Zfp277
Dock4
Wasf2
Sgms2
Ist1
Lama4
Sppl2a
Emp1
Ube2a
Crtc1
Plekhg1
Tbck
Aimp1
Micall1
Rgs3
Nvl
Fut10
Scn4b
Inava
Ift140
Fsbp
Cramp1l
Pnn
Dhx33
Rab33b
Znhit3
Adgrv1
Slc39a10
Spdl1
Znhit1
Rnf26
Plod3
Got1
Akap11
Pou2af1
Utp3
Wdfy2
Tmem94
Chordc1
Copz1
Spata17
Gpatch2
Rtkn
Met
Dst
Gm51425
Zfp607b
2900026A02Rik
Tut4
Sri
Fosl1
Dcp1a
Rnf14
Cd47
Mef2a
Drg2
Lancl2
Eif3f
Commd1
Vwa1
Myo6
Tut1
Fdxr
Nuf2
Get4
Cstf2t
Nup54
Krr1
Anapc5
Kdsr
Snrnp200
Mindy2
1810024B03Rik
Col9a1
Anp32e
Yipf2
Timm29
Polr3g
Mfsd4b4
Mblac2
Bod1l
Mast2
Opa1
Pygo2
Ndrg1
Hars
Hars2
Sacm1l
Chchd2
Sphk2
Rpl18
Trib1
Ptger1
Ube2j2
Gbf1
Fem1b
Gpsm2
Cdyl
Exosc4
Srp19
Cep63
Anapc13
Nedd4
Ints4
Rptor
Phldb1
Cipc
Mtres1
Arid1a
Cyth2
Tanc1
Dnajc16
Lrriq3
Fpgt
Slc33a1
Nufip1
Gpalpp1
Esyt2
Sec14l2
Mcm3
Ube2f
Chadl
Ssbp1
Mideas
Eapp
Smim14
Galk2
Cops2
Pkn3
Birc2
Prdx2
Rgl2
Ahctf1
Echdc3
Zfp668
Xab2
Pet100
Sun1
Mocs3
Dpm1
Polq
Septin7
Calcoco1
Tmem101
Ric8b
Bms1
Zbtb3
Syn1
Spring1
Rnft2
Stat3
Map3k3
Get1
Gas7
Timm10
Scamp1
F13a1
Pabpn1
Zzz3
Jpt2
Zfp513
Il18
Ddost
Bco2
Hip1
Cyth1
Ndufs7
Kifc5b
Gtpbp3
Agbl5
Tedc1
Rnase10
P4hb
Fzd6
Tom1l2
Drc3
Zfp654
Cggbp1
Vta1
Zfp180
St6galnac6
Dmxl1
Rps3a1
Ss18l2
Srp68
Hes2
Opa3
Cops4
Tiam2
Plekhf2
Tomm40
Creld2
Alg12
Htra2
Aup1
Fra10ac1
Tpbg
Snrpc
Agpat5
Zfp101
Ppil3
Nif3l1
Fbh1
Ankrd16
Lsr
Fam187b
Ltbp1
Egr2
Vamp4
Rrp15
Cnot11
Rtn4
Cnot8
Acp2
Slc25a45
Vps51
Ivd
Hdac10
Znrd1as
Znrd1
Ddx17
Rbbp5
Gramd1b
A930018P22Rik
Tma16
Pradc1
Cct7
Calm1
Tmx2
Med19
Hap1
Zfp961
Snx12
Ap1g1
Syvn1
B230219D22Rik
Rpl36al
Prr3
Mgat2
Gnl1
Zbtb2
Fos
Myh10
Hsd17b12
Usp2
Atp5g1
Actr3
Postn
Map3k7
Timm22
Pex3
Nop14
Hsf1
Grk4
Bop1
Adat2
Ddx41
Cgref1
Creb5
Prcc
Pcdh9
Tfcp2
Phf12
Sulf1
Dad1
Abhd4
Wdr92
Pno1
Fbxo31
Sox6
Mest
Aox1
Tulp4
Ppp1r11
Ibtk
Cfap298
Txnip
Gm6712
Ugdh
Trim45
Agap1
Ppp6c
Ap4e1
Zfp563
Vps28
Marchf7
Smarcd2
Lyrm1
Dcun1d3
Fzd2
Faap24
Trp53rkb
Mettl25
Gcnt2
Ccdc59
Nbr1
Klhl26
Cflar
Brca1
Slc43a3
Ak1
Ddx20
Unk
B4galt7
Luc7l2
Npc2
Nelfa
Mtmr6
Kansl3
Isca2
Herc2
Cox7a2
Brat1
Txnl4b
Dhx38
Top1mt
Prickle1
Ctnnd1
Ogfod1
Nudt21
Mlec
Cul1
Fam160a2
Tex14
Mon1b
Slc25a20
Pcbp2
Tas2r134
Pdk2
Pip4p1
Tcf3
Retsat
Elmod3
Panx3
Nme1
Grk5
Dnajc24
Klhl20
Dus1l
Gins2
Mbnl2
Prepl
Ift46
Fbxl15
Camkmt
Rara
Msmo1
Lig4
AW549877
Ahcyl2
Arhgap11a
Slc35e4
Kifap3
Trub2
Ints1
Dok5
Gne
Srm
Ncbp3
Trim41
Clcn3
Taco1
Msantd4
Tmem242
Pum3
Phb
Leng8
Nfe2l1
Yars
S100pbp
Mphosph10
Mcee
Tmem144
Sf3b2
Cacybp
Mtg1
Tmem267
Nap1l4
Cdk5
Psma8
Rap2a
Pcyox1l
Cacng2
Trp53rka
Qtrt2
Ccdc191
Arrdc2
Dhrs3
Ap3s2
Rbm34
Tbcb
Rpa2
Prf1
Polr2i
Mrs2
Cnot10
Set
Akap8l
Ndufv1
Rpl26
Gpn3
Fam216a
Ufsp2
Supt4a
Mdc1
1700029J07Rik
Traf7
Ing3
Zfp560
Ect2
Prnp
Prn
Mapkapk5
Slc35a3
Zfp472
Cpsf1
Gfpt2
Mark4
Wdr25
Wars
Mxd4
Snrpd3
Gucd1
Sugct
Pigm
Mplkip
Dusp12
Rrm1
Slc35b1
Cbx5
Sec22b
C330007P06Rik