ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035119 | Embryonic nose
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◣ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Gnai2
Phrf1
Pip5k1c
Atg12
Ap3s1
Fam53c
Sp2
Cmc2
Cenpn
Arrdc4
Ndufb1
Cpsf2
Septin11
Taf15
Rita1
Ddx54
Lrpprc
Tigd5
Eef1d
Iqch
Aagab
Cnot6
Tardbp
Rtn3
Arntl
Cln8
Smim4
Hdac2
Flad1
T2
Flcn
Psip1
Rfx1
Prkdc
Mcm4
Arid4a
Myh14
Tst
Mpst
Asah1
Tmem260
Eed
Smc3
Cenpp
Galnt10
Calm3
Sod2
Fus
Osbp
Ankrd13a
Git2
Ptcd2
Mrps27
Sec14l1
Uchl3
Abhd2
Slbp
Sash1
Hyal2
Ska2
Prr11
Hnrnpc
Atrnl1
Ptov1
Prkci
Tada3
Arpc4
Mlst8
Dut
Gipc1
Cdiptos
Cdipt
Aldh4a1
Rpl22
Ankrd54
Pkia
Dohh
Ppm1l
Nphp4
Kcnab2
Rab5b
Ptdss1
Mterf3
Eif2ak3
Cenpu
Sharpin
Maf1
Pik3r3
Prdm10
Ttll7
Ptcd3
Polr1a
Rpn2
Mroh8
Ephb2
Ndst2
Por
Akirin1
Ift27
Rbm25
Rmnd5a
Tepsin
Ndufaf8
Cwc27
Zxdc
Ube2c
Atg101
Uros
Bccip
Fbxo33
Spty2d1
Pknox1
Dnmt1
Sgms1
Selenow
Uqcrh
Lrrc41
Bzw1
G3bp1
Noct
Diaph1
Robo1
Rnf5
Madd
Zfp219
Tmem218
Fkbp3
Paxip1
Dlst
Mblac1
Rnasek
Cd3eap
Rel
Cnot1
Khsrp
Slc36a4
Map7d1
Them6
Nlk
Atp5b
Dpp9
Cspp1
Cops5
Adgrv1
Ankhd1
Cul2
Sp1
Nmral1
Ttll10
Cenpe
Gpr108
Tcerg1
Mrpl21
Ighmbp2
Fam227a
Cby1
Wasf1
Cdc40
Brd2
Top2a
Gm5165
Med23
Tcp11l2
Nt5c3
Mia2
Mtss2
Ccser2
Rab11b
Zfp869
Rpl27
Oxr1
Cltc
Tom1
Nfatc2ip
Rab21
Fam204a
Arhgap19
Mis12
Derl2
Cdk12
Ccdc85c
Slc39a3
Ap2m1
Abhd16a
Slc35e2
Sh3kbp1
Rbbp6
Ss18
Nudt2
Kif24
Cd164
Eif3b
Bcl6
Mat2a
Wwox
Armc1
Kctd2
Atp5h
Jun
Myl12a
Raly
Palb2
Dctn5
Frat1
Gnb2
Dnm2
Per2
Dgat2
Frat2
Glo1
Klhl26
Bzw2
Ankmy2
Cdca7l
Paip2b
Smim14
Ist1
Cyth1
Srgap2
Fam72a
Nufip1
Gpalpp1
Qrich1
Zfp24
Prkaca
Ube2b
Fsbp
Cic
Tcp11
Fgd4
Tbc1d17
Akt1s1
Ttc41
Hsp90b1
Pafah1b3
Cdca8
9930104L06Rik
Rhbdd3
Ewsr1
Sigmar1
3110082I17Rik
Lrch4
Uba1
Syn1
Wasl
Akt2
Utp18
Mbtd1
Pnn
Jpt2
Mfsd8
Immp1l
Elp4
Gatad2a
Stt3a
Tmem9b
Hars
Hars2
Kmt5c
Rnf26
Glrx5
Fanci
Kdm4b
Katnb1
Zfp143
Stip1
Lsg1
Evi5l
Wasf2
Gas7
Tbck
Aimp1
Pin1
Nup54
Mrpl44
Pfdn4
BC005537
Fchsd2
Psmb3
Pan2
Tnrc6b
Pou2af1
Gm51425
Mvk
Mmab
Cct8
Cnot3
Abhd18
Mrpl30
Mitd1
Gbf1
Pdk2
Ddx56
Hexim2
Mtmr14
Traf2
Nuf2
Myh10
Mtch2
Zcchc14
Polg
Tctn2
Wdr77
Atp5pb
Wdr36
Atg16l2
Mrps31
Lars
Srxn1
Hbp1
Cfap298
Luc7l2
Hnrnpa2b1
Cbx3
Zfp654
Cggbp1
Rab40c
Kdm4a
Ppt2
Slc43a3
Fbh1
Ankrd16
Mrpl1
Dcps
Zfp386
Zfp961
Zfp687
Cdc25c
Actr3
Dmxl1
Gm6712
Prpf40a
Arl6ip6
Slc25a20
Cyth2
Prnp
Prn
Frmd6
Arl2
Cul1
Sphk2
Rpl18
Canx
Rbm39
Tmem94
Ngdn
Spata17
Gpatch2
Zswim4
Ube2j2
Copz1
Spring1
Rnft2
Wdr25
Wars
Aig1
Tedc1
Ttc14
Znhit1
Plod3
Lrriq3
Fpgt
Tle3
Wdr27
1600012H06Rik
Kpnb1
Camta1
Timm17b
Pqbp1
Zfyve21
Xrcc3
Tut1
Hdac1
Abhd1
Proser1
Nhlrc3
Rpl19
Ap2a1
Ss18l1
Psma7
Calm1
Tdrkh
Cstf2t
Srp19
Ift140
Cramp1l
Snrnp200
1810024B03Rik
Knl1
Opa1
Nucb2
Uvssa
Fut10
Dcp1a
Med30
Scamp1
Rusc2
Utp3
Dnajc16
Tube1
Fam229b
Trib1
Isy1
Sel1l
Anapc5
Flywch1
Pex3
Adat2
Ilf2
Rab28
F13a1
Slc33a1
Opa3
Mettl25
Ccdc59
Pip4k2b
Mgrn1
Chordc1
Kat6b
Ddost
Kansl2
Pcyox1l
Lnpep
Nap1l4
Styxl1
Mdh2
Zbtb3
Tfcp2
Dap3
Anp32e
Mphosph10
Mcee
Rab33b
Tom1l2
Drc3
Got1
Spdl1
Pip4p1
Mocs3
Dpm1
Zfp748
Txnip
Nol6
Denr
Tspan4
Polr2l
C330007P06Rik
Fam20b
Kctd9
Cdca2
Mtf2
Ap1g1
Zfp101
Fdxr
Lancl2
Mcm3
Bms1
Npc2
Isca2
Grk5
Cnot10
Klhdc10
Gtpbp3
Cnot11
Get3
Nbr1
Brca1
Meis1
Rrp15
Zbtb40
Gnas
Haspin
Slc29a1
Dbp
Ctnnd1
Syt7
Sgms2
Lig4
Abhd13
Tubb4b
Fosl1
C1d
Dedd2
Ppp6r3
Psmb2
Rps6ka5
Get1
Ddx41
Nedd4
Galk2
Cops2
Hnrnpr
Ints10
Hsd17b12
Rbm27
Aff1
Eif3f
Pabpn1
Ufsp2
1700029J07Rik
Ssbp1
Zfp180
Zfp574
Dhx33
Nudcd2
Hmmr
Uchl1
Ints4
Fam149b
Ecd
Hinfp
Hnrnph2
Gla
Znrd1as
Znrd1
Leng8
Ndufb3
Fam126b
Miga2
Timm22
Krr1
Ciart
Tob2
Qtrt2
Ccdc191
Adnp
Trip4
Ift22
Wdfy2
Mob1a
Drg2
Chchd2
Dcaf7
Zbtb5
Tmem101
Stat3
Exosc4
Retsat
Elmod3
Mfsd13b
Cdr2
Zfp513
Gpn3
Fam216a
Trim45
Esyt2
Srsf1
Atp6v0c
AW549877
Ccdc88a
Cnot8
Gatad2b
Ube2f
Mtor
Nvl
Rpp38
B3gntl1
Fdft1
Xab2
Pet100
Chd6
Sptlc2
Mtg1
Sugct
Mplkip
Zdhhc5
Rogdi
Spsb3
Nubp2
Acp2
Tmx2
Med19
Ensa
Yars
S100pbp
Polr2a
Tfg
Traf7
Ccdc89
Lamp1
Zfp668
Rpa2
Cluap1
1700037C18Rik
Tcf3
Hnrnpl
Kansl3
Ap3s2
Recql
Golt1b
Nme1
Pum3
Zfp560
Mre11a
Ankrd49
Dffb
Cep104
Postn
Rpl26
Rtraf
Aars
Yipf2
Timm29
Tspyl1
Smarcd2
Tmem198b
Dnajc14
Mia
Atp5g1
Vps51
Bcas3
Herc2
Kifbp
Smarcal1
Tulp4
Nop14
Grk4
Faap24
Htra2
Aup1
Fam76b
Cep57
Ubald2
Tomm40
Polr3b
Snrpc
Klhl20
Yju2
Znhit3
Mrpl39
Mxd1
Smg8
Trappc9
Zdhhc24
Actn3
Cipc
Ube2s
Cct5
Atpsckmt
Trp53rkb
Ogfod1
Nudt21
Kifap3
Atf7
Zfp691
Ndufs7
Zfp472
Ggct
Pigm
Sacm1l
Fem1b
Tma16
Orai3
Nasp
Alkbh3
Cox7a2l
Rrbp1
P4hb
Cacybp
Ift46
Trp53rka
Psph
Cct6a
Usp22
St6galnac6
Mlf2
Drosha
6030458C11Rik
Wdr92
Pno1
Ticrr
Lama4
Zswim3
Acot8
Cyp2u1
Gid8
Dido1
Rheb
Fos
Akap8l
Atp8a1
Emp1
Septin7
Map3k3
Cfap20
Uvrag
Ercc6l2
Kifc5b
Taco1
Mon1b
Sf3b2
Slc25a25
Dcun1d4
Calcoco1
Gabpb2
Myl12b
Ppip5k2
Gin1
Cebpa
Ptrhd1
Cenpo
Cdk2ap2
Dad1
Abhd4
Ncam1
Dnajb5
Creb5
Nsfl1c
Cnpy3
Ect2
Chmp5
Bag1
Manf
Dnajc24
Nqo1
Spag7
Kif1b
Ccdc57
Med6
Nup133
Zbed5
Mcoln1
Cabin1
Creld2
Alg12
Cdk5
Wdr90
Arid1a
Siah1b
Klhdc4
Ttc26
Ppp1r11
Man1b1
Rab5if
Fra10ac1
Tmem167b
Ppox
Ivd
Rer1
Morn1
Rbbp5
Ttbk2
Mtmr6
Zdhhc16
Exosc1
Aacs
Itgb3bp
Efcab7
Rwdd1
H2bc7
H2ac7
Kdsr
Umad1
Rpa3
Rraga
Rbbp9
Chadl
Mideas
Hip1
Fitm2
Tbp
Os9
Gcnt2
Tbccd1
Dnajb11
Tmem198
Chpf
Lyrm1
Dcun1d3
Ahcyl2
Wtap
Rplp0
Oip5
Nusap1
Btbd8
Gpr173
Fam227b
Dtwd1
Gsk3b
Hspa4
Pxmp4
Cdyl
Egr2
Vamp4
Ttc4
Zkscan1
Inava
Cnnm2
Atf6
Fbxo5
Rbm15
Phb
Swsap1
Rpl9
Lias
Ppwd1
Cenpk
Cox7a2
Cep135
Fbxw5
C8g
Mbd3
Polq
Txnl4b
Dhx38
Cacng2
Insr
Tjp2
Rtkn
Rptor
Rrm1
Limch1
Eapp
Msantd4
Tbcb
Polr2i
Ncln
Tex14
Ylpm1
Ankrd39
Zfp866
Tox4
Rab2b
Gpatch8
Micu2
Golph3l
Snx17
Eif2b4
Snx12
Fbxl15
Sec22b
Gm3448
Gm3417
Tcte3
Ermard
Mnt
Prmt5
Cstf1
Aurka
Xylb
Gnaz
Tmem41b
Crem
Neil3
Ap3d1
Vcp
Ap3m2
Ccdc130
Ube2a
Nudt15
Taf9
Rad17
Ak6
Tatdn3
Nsl1
Cfap77
Psmd5
Psmd4
Hdac10
Tpp2
Pibf1
Dis3
Mmadhc
Mxd4
Tasp1
Mlec
Mrpl3
Scin
Pkn3
Ypel5
Gtpbp1
Zc3h6
Nsrp1
Ddx18
Pnisr
9530077C05Rik
Ppm1b
Cpsf1
Gpx1
Dusp6
Ogt
Pygo2
Fnbp4
Incenp
Atad2
Mnat1
Ap4e1
Ints12
Gstcd
Glcci1
Ak2
Gm12258
Colgalt1
Slc66a2
Ip6k1
Pafah2
Ssc5d
Far1
Nxt1
Nelfa
Ankef1
Ddx39a
Gtf2i
Fuz
Xrcc5
Kctd7
Prcc
Slc25a42
Actr1a
Bub1
Pxk
Stag1
Vta1
Cdk11b
Tnpo1
Akap11
Prepl
Camkmt
Fubp3
Fbxw8
Klk10
Gtf2b
Pms1
Ormdl1
Rap2a
Zbtb22
Slc35b1
Rpl3
Shisa5
Srd5a1
Nsun2
Akap13
H3f3b
Pcbp2
1110051M20Rik
Mpv17l2
Etf1
Rad1
Brix1
Zfp719
Mdm2
Ino80
Dmap1
Tyk2
Tmem242
Slc39a13
Pigc
4930558K02Rik
Dynll1
Gatb
Polr3k
Ankrd11
Rab5c
Zfp809
Lca5
Nfe2l1
Tfpt
Prpf31
Kbtbd3
Mtmr4
Banp
Atp5g2
Ahctf1
Usp2
Sec13
Tars2
Alpk1
Samd4b
Gmfg
Usp30
Ptma
Hnrnpul1
Kctd5
Ddx10
Aaas
Sin3a
Timm10
Srp68
Dgcr8
Clspn
Abca3
Abca17
Abca7
Rbm34
Nudt5
Cdc123
Tcp1
Mrpl18
Phpt1
Zfp81
Tprn
Leng1
Uspl1
Fkbp14
Ing3
Snrpd3
Gucd1
Nfyb
Nbn
Rbsn