ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852813 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◣ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
ARID2
CELF3
PLPP2
CCPG1
C15orf65
PTMA
TES
C2CD4D
PIPOX
NOTCH1
FAM227A
CBY1
MTF2
WFDC8
GGH
ADAM28
ARPIN-AP3S2
ARPIN
GRK6
CDH18
NFIB
TMCC1
HGS
ARL16
SNAPC3
ZSCAN2
IFRD1
VWA2
TARS3
ZBTB45
DCSTAMP
PLEKHG1
SYBU
PLCH1
NDUFB5
MRPL47
ZNF775
LPP
CDK5R1
FUZ
HMGB1
CCT2
HMGN1
GSN
YEATS2
ESRRA
SINHCAF
SAPCD2
KCNN2
HES5
SRGAP1
GSTP1
KDM2A
VASH2
SEPTIN9
LTK
CCL26
SIX2
MARCKS
SLCO5A1
IQCH
AAGAB
SLC12A7
SH3GL3
SNX27
KMT2B
BMPR2
AUH
TMEM41B
ERMN
SACS
H4C14
H4C15
LTBP1
HDAC9
TIA1
NEBL
KLF7
TMPRSS7
SYNCRIP
YWHAQ
FBXL19
CFL1
TJP2
SPRY4
POLB
SYNE2
LY6G6D
KIF21B
DHX8
ARIH1
STAU2
MACROH2A1
SLC25A36
ST7
CYTH2
MSANTD4
VEZT
FGD6
CPVL
METTL11B
DDX17
TMEM132A
HOXA9
ESRP1
ST6GAL1
CBX1
ZDHHC5
OAZ2
ST3GAL4
STAG3
GPC2
TMPRSS4
PHF5A
ACO2
DOCK9
PDIA4
MAT1A
CSRNP2
HNRNPDL
ENOPH1
TMUB2
SLC16A13
MKRN3
PMEPA1
PPIA
NADK
ZNF687
HES6
MOBP
SRRM4
CPSF4L
PPDPF
CLEC9A
ZFC3H1
THAP2
DAGLB
MTDH
JUP
ETV1
TRAK2
STRADB
RAB30
CTTNBP2NL
TRIB1
NARF
SC5D
ZBTB8OS
RBBP4
KLHL24
BORCS6
HSD3B1
ZNF304
NUP160
SLC33A1
TIAL1
EYA1
ZNF358
ARID5A
S100A2
PLEKHJ1
ZBP1
PER2
ALDH3A1
ZNF428
SYTL2
GADD45A
LPAR6
DDX58
TNRC18
UBQLN4
LAMTOR2
GPSM3
RIMBP2
HEBP2
GDF5
CEP250
UBE2T
MCM7
AP4M1
GPR1
FAM120B
PTHLH
VGF
FNBP1L
NRCAM
CHN2
HIP1R
SH2B2
ANP32E
FMNL3
CHML
OPN3
CHD6
MANSC1
IGF1
MCCC1
PIF1
SPHK1
DMRTA2
PGK1
CELSR3
SLC2A4
LPCAT4
NCOA4
MTA3
KCNG3
TSPAN13
UGT1A5
MRO
GADD45G
FMN1
PTPRO
PDIK1L
NHSL1
LOC389199
AFAP1
MEGF9
SAXO1
RRAGA
MFSD6
FGFRL1
WDFY2
ZSCAN9
ZNF277
DOCK4
ERV3-1-ZNF117
ERV3-1
SH3PXD2A
CA8
LGR6
GTF2IRD1
DLX5
ZNF184
ANAPC15
CNP
STK32C
LRRC27
ETV6
INSM1
PARVG
USP6NL
H3-3B
ZNF273
EIF3E
SH3BP4
THEM4
BAZ2A
IL23A
HACL1
BTD
ZBTB6
ZNF180
TUBB
H3C6
SRSF7
PCDHB8
TLX3
H2AZ2
ZSCAN31
THEMIS
MAP4K4
ZCCHC12
LDB1
TTC23L
RFX5
YPEL1
OR4C6
EMSY
KRT8
TOMM40
FOXO6
KNTC1
PTX3
BTG1
GLI2
TUFT1
TUT7
RNF157
C20orf96
BAZ1B
TLN2
SHF
NKIRAS1
RPL15
USP22
ZNF195
DPP3
ID1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CITED2
SDHD
MAFG
ADRM1
BBS7
ZNF106
CCDC88A
ZBTB38
ACTB
PSMB7
BRINP2
MIDN
FTH1
RNF38
LIMCH1
SPATA12
ZNF250
CIART
MGAT5B
FAM72D
FAM72C
LZTS1
RRBP1
ARHGEF38
ZFP62
PLEKHG4B
ZNF107
PWWP2A
TCF4
NFE2
LNX1
RBP1
CDK5RAP2
RAB11B
HNRNPAB
TAX1BP3
EMC6
NTMT1
RNF145
SASH1
SLC9A2
STAT3
LMO4
PDP1
HSPA13
DUSP7
TMEM211
OARD1
NFYA
EIF4A2
NAP1L4
PNRC1
FAM76B
CEP57
GREB1
HECTD4
SEMA6C
TRMT2A
RANBP1
PPME1
C2CD3
MRPS2
C9orf116
TAF1A
POC1A
SLC25A11
RNF167
EXPH5
ZSWIM4
AGO1
DST
ARMC3
NELFCD
TOMM40L
STMN1
FILIP1L
CCNJ
PON2
DNMBP
GOLGB1
NDUFS5
OSBPL1A
PLXNB2
PARP1
ZCCHC14
PELATON
WDR36
KANSL1L
CSRNP3
ZNF92
SLC35E2B
GET3
TESK2
EGR3
ZBED5
YWHAG
ZFP69B
FAM83A
CAPRIN1
RAI14
LGALS9
SFPQ
EXOC5
AP5M1
SCNM1
LYSMD1
RPUSD4
FAM118B
C6orf132
ZNF736
CRYAB
NAGPA
MRPS30
ZNF630
POLR3C
RNF115
RSPH14
GOLIM4
CACHD1
CD2BP2
CTH
WASHC3
VANGL2
PELI1
TLE3
GPR137
HES2
HOXD3
TMX2
MED19
PAIP2
KCNMA1
HEXIM2
TCIM
TMEFF1
SDCCAG8
CEP170
CNKSR3
ZCCHC8
POU2F1
C15orf40
LRRC8A
KYAT1
ACTR1A
PTK2
NFX1
MOSPD3
CBX2
HK2
FZD2
COPS7A
KMT5A
ETV4
ZSCAN16
GOLGA6B
ZNF506
ZNF720
PACSIN3
GDPD1
ISL2
GOLPH3L
STC2
KRTAP3-1
NASP
PRSS23
PHF3
ADAR
IP6K2
CUEDC1
TMEM44
CHRNA1
WBP11
C12orf60
SRPRA
DYRK1B
PEX11G
MICAL3
SCAF4
DIPK1A
NOTUM
ERGIC2
PIMREG
VPS50
HEPACAM2
EGFLAM
NNT
DIABLO
DUSP12
RTBDN
HILPDA
PRKAB2
CHD1L
PPFIBP1
DDX5
ARNT
PTPRK
SNAI2
LPIN1
DDX3X
FBRS
SUMO2
NPDC1
PHC2
GPR15
EXOC6
SCAF11
ZNF680
HSPH1
PCDHB13
AP3M2
RTN4
PLXNB1
DIPK2A
PHF12
RPS6KA2
CACYBP
GSX1
PRKRIP1
ACTR2
IGSF9
SESN2
NR4A1
MAPKAPK3
CISH
RABGAP1L
LUC7L
KIAA1671
FZD1
ICE1
CHMP4B
POLR2M
CCDC88C
CYTH1
SKIL
AKAP9
KIAA0895L
ZFAND3
ITGB1
USPL1
EIF4A1
TRIM38
S100A4
PRKDC
MCM4
HOXB3
ITPRIP
YLPM1
CD300LB
PRR19
PAFAH1B3
PRRC2B
ASNS
MMD
VEPH1
KDM3A
ICOS
PDCD6
ANO6
ACLY
PI4KB
SMC4
IFT80
PGM2L1
RCOR2
ZNF124
COX8A
NEK2
RAB5C
KLF12
PTP4A1
PRDM1
SUSD2
RGS3
ZNF608
RAB2A
TNFSF9
DLX1
ADAM10
FAM166C
ST8SIA1
MYL12A
FGF18
LLGL1
ARF4
RSF1
AAMDC
ZBTB26
ZMAT2
SCD
SVOP
PRSS56
FERMT1
NUFIP2
DMWD
OGA
CCNG2
DNM1L
RPA2
ZNF268
TFAP2A
SPIN1
FIZ1
ZNF524
ZBTB10
GNA12
SIRT1
CACNB3
KPNA4
GNB1
BACH2
HSD17B12
TWIST2
ATOH8
SMARCAD1
MMACHC
HBP1
ZNF292
METTL9
TPK1
RAPGEF2
PCBP1
ZZEF1
CYB5D2
CDC14B
AASDH
SOX5
ZNF37A
GPAT4
SUN2
FSCN1
VPS45
KIFBP
WASF1
CDC40
FXR2
HAGH
FAHD1
ZNF708
EMC3
ZMIZ2
RPS11
MMP11
ZWILCH
RPL4
CLCF1
EEF1AKNMT
ACTL6B
SOX6
MEF2C
C11orf58
ZNF747
SMARCE1
MAML1
NCOA5
MTSS2
GFPT1
FUT4
PIN4
SIN3A
ILF2
ZNF91
HCN4
TTC13
ARV1
FBXL7
LDHA
COX7A2L
SPRED2
GCH1
CRIP2
MAGI1
UBL7
OXR1
TNPO1
DDHD1
PCBP4
GOLGA6L10
SNRPN
GTF2H4
PSMD14
UTP23
SLTM
CSNK1E
RNF19A
RPL27
TTC21A
GORASP1
TUT1
MAPRE2
GTPBP3
ANO8
DLG2
RTRAF
ASF1A
SLC39A10
FXR1
KLHL26
RAB3IP
TMEM126B
FMNL2
UBTD2
SLC25A25
NAIF1
MEA1
FBXO46
H2AC19
H2AC18
SH3D19
POLR3E
KDM1A
SERPINI1
PDCD10
MRPL49
FAU
MINDY1
NDUFS2
RPA3
EXOSC2
UBALD2
CLDN22
CEP41
RBBP9
KHDRBS1
NAALADL2
GOLGA6D
NDUFB4
PHF14
DYNLL1
FBXL8
AMMECR1L
CBR4
CWC22
FAM221A
COL18A1
PLK2
DNAH14
THRA
PDE8A
GOLGA6L9
UFD1
CDC45
ARHGAP18
SLC20A2
TMEM9
EFR3B
TIPARP
CCL2
APH1A
PPP1R7
PASK
GET4
GPT2
MAPK8
TMEM18
APBA2
PAG1
ATXN7L2
SSR4
IDH3G
ZNF500
SNX30
HARS2
HARS1
PODXL
FOXP1
PIK3R3
SLC11A2
PPP1R15A
MPND
FRAS1
HDGF
FICD
EMC9
PAXBP1
LRRC23
CABYR
HOXB9
MANEAL
PSD
FBXL15
PRR15
DISP3
SLC7A11
MTHFD1
RIOX1
PPP1R12B
EFCAB12
TCOF1
ZIC4
TSNAXIP1
RANBP10
BLOC1S4
ZNF197
PRKRA
PJVK
PCCA
NOTCH2
GPBP1
EBAG9
STAT2
DENR
SRP9
GJB7
EP300
ZNF84
SRGAP2C
SRGAP2B
ELP1
ABITRAM
BAHCC1
XKR4
ADH4
IPO11
F11R
TCF12
YDJC
E2F7
CDC37L1
PLCG1
TMEM14B
TMEM249
BOD1
DGCR6L
ZNF718
ZNF595
TFF3
PTCD2
MRPS27
CAVIN2
MYCL
KIDINS220
APLP1
RNF43
RBBP6
PBLD
HNRNPH3
CDK12
VMP1
PTRH2
ZNF8
AKR1A1
NFATC2IP
ZNF669
NUDT3
FGF3
ATG16L2
STRIT1
WDR87
SIPA1L3
NCL
PIP4K2C
NRXN3
SLC45A4
HOATZ
BTG4
PRKCI
PPM1B
OGDH
SEC22A
MYO10
TUBG1
RETREG3
TMEM52
TCERG1
EVL
PRDX1
CADPS
CAMSAP1
CFAP20
ARHGAP24
TBC1D31
SPRING1
RNFT2
GID4
ATPAF2
PCNX3
PALMD
SRSF6
POLR2H
DAAM1
ULBP2
DNM3
CCDC146
GFOD1
PCBP2
MPRIP
ATXN7L3B
SDK1
KLF11
WNT5B
ZNF724
TIMM10
WDR72
KBTBD2
HIGD2B
BBS4
C10orf90
ADH1C
RABL3
GTF2E1
SRP14
ZNF714
CD55
FAM47E
XRN2
SPATA6L
PLPP6
ULBP3
SCARB2
PTPRM
CEP63
ANAPC13
RBM39
TSPAN19
LRRIQ1
EXD1
CHP1
IRF4
TIGD5
EEF1D
UBE2N
PDE4D
MAPK14
BZW2
FAM174A
FGF19
ANKMY2
SLC3A2
SHPRH
TLNRD1
POU2F2
FEM1A
RUFY1
ZNF672
HES4
TMPRSS3
RPIA
NOL6
ING3
GPAT3
CDCA4
NBEAL1
EMP1
KRT80
WTAP
SOD2
ZIC1
CDK5RAP3
STT3B
KIAA0232
NELL2
DBNL
IER5L
SPAG9
TSTD2
NCBP1
TBPL1
CCDC50
VGLL4
BRI3
MIGA2
AMIGO3
LYPLA1
MYLK3
TLL2
IL37
CHD8
RCOR1
CIC
DAD1
ENSA
NCBP2AS2
NCBP2
VSTM2A
TMEM71
PHF20L1
GPR3
ZNF606
LAMB3
ITGB6
EPHX4
WDR33
RPS6KB2
DNTTIP2
ARL14EP
ARRDC3
ARID4A
KRIT1
ANKIB1
WFDC10B
KRT19
KCNJ9
RASAL2
STOX2
ZNF3
ZNF253
GDF11
CNR1
EIPR1
MARCHF6
CDK13
DOK7
KLF5
RNF44
NEMF
NDUFA2
IK