ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3367070 | TE-5
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◣ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

MTRNR2L8
RGPD2
RGPD1
MTRNR2L2
MTRNR2L9
MTRNR2L10
NRARP
MTF2
SACS
PIPOX
FAM227A
CBY1
WDR74
METTL11B
HMGB1
DNMBP
SOX6
REST
NDUFB5
MRPL47
HDAC9
OTX2
PTMA
WFDC8
GRK6
DNMT3B
NRG1
FUZ
NOTCH1
MOBP
ETV1
FGD4
ARID2
ADAM28
GSN
PPP1R16B
DDX17
FLAD1
SNRPN
PLPP2
IFRD1
PDPN
GADD45G
ETV4
OBI1
TMCC1
ITPRIP
CELF3
SRRM4
SNX16
HESX1
DHX32
FZD2
PRICKLE1
LIN28B
NADK
FBP1
BFSP1
LRRTM3
ZSCAN2
PSMD9
HPD
CAMTA1
PHF5A
ACO2
SFRP2
TIMP4
RFX4
KMT2B
TDGF1
USP44
CCT2
PMEPA1
ESRP1
WDR49
ZFC3H1
THAP2
TNC
KDM2A
FBXL19
HGS
ARL16
IER5L
FGFR2
PLEKHG1
FBXO40
ZNF343
SASH1
TBC1D16
MED12
IQCH
AAGAB
NDUFS5
NDST1
KIFBP
CYTH2
OSBPL1A
CTNND2
TES
GPSM3
GDF3
GET3
DGLUCY
ARIH1
PDCL
CEP41
ACVR1
DICER1
TNRC18
CDC14B
TUBB
ALDH7A1
TOMM40
DAGLB
CAPRIN1
CER1
PGK1
ADA2
EPB41L1
ZNF304
SNAPC3
CARHSP1
ERMN
TMEM41B
SLC33A1
WBP1L
VENTX
NRCAM
H3-3B
ZNF775
PCYT1B
HES5
TJP2
SHF
ZNF532
CCDC169-SOHLH2
CCDC169
JPT1
DACT3
FAM181A
WDFY2
SLC10A2
ZNF195
AUH
CHN2
KDM3A
ANK2
CHD6
LRRTM4
DST
SPRY4
RGS3
GIMAP5
CCN2
SGMS2
FOXP1
SLCO5A1
TRDMT1
TESK2
LIMCH1
NANOG
MSANTD4
C20orf96
SLC7A5
RASAL2
CELSR3
ETFB
C1orf127
NEBL
UFD1
CDC45
AASDH
SRSF7
POLB
DPPA4
SYAP1
ESRRA
PCDHB8
SLFN12
KLF7
PXMP4
TMUB2
ST18
SIX2
LLGL1
TRMT2A
RANBP1
RNF19A
MARCKS
ACSL1
AK4
ZNF428
ACCS
MACROH2A1
PALM2AKAP2
PRRC2B
TMPRSS7
PPP1R18
DTNA
PITPNM2
DUSP12
ARID5A
SLC16A13
CCL2
MCCC1
C22orf39
ETV6
HMGN1
FOXO6
KCNIP4
ZFYVE1
ZSCAN9
SMAD3
KRTAP3-1
SLC2A14
IFIT3
PDIA4
VASH2
DET1
JAG1
VEZT
SLC25A36
FGD6
SYNCRIP
PLCH1
HSPH1
RIF1
CFL1
VANGL2
PIK3R3
GADD45A
GFRA1
ANAPC15
CDH10
SLC25A11
RNF167
IL23A
NUP160
CNN3
RTBDN
MMP10
CD2BP2
NEDD9
GSPT2
TUT1
SAXO1
RRAGA
SH3GL3
RAB30
SDCCAG8
CEP170
RIMBP2
OGA
TMEM114
KCNN2
SPAG9
GRHL2
HLTF
DHRS3
WDR36
TIAL1
CNGA1
PES1
ZNF254
SPATA12
PRR5L
MEF2C
HOXB1
PDE4B
TFDP2
ZNF358
DHX8
PKNOX2
PTGS1
EGR3
CTTNBP2NL
AKAP9
MOSPD3
GEMIN7
PWWP2A
AHCYL2
GCNT2
CFAP20
YLPM1
PDE4D
CSRNP2
CLCF1
IPO11
CCDC167
ZBTB45
PRM3
SINHCAF
RNF213
ABAT
ZNF202
SPIC
KIF21A
TCN2
BORCS6
ZNF608
TIA1
ADAR
SOX5
DISP3
LYPD1
SMARCAD1
KNTC1
PIF1
RGS12
G3BP1
CEP63
ANAPC13
MAP2K5
EMSY
SENP8
MYO9A
ARF4
AKIRIN1
SYTL2
DPP3
ZBTB40
TSGA10IP
ZNF474
DDX3X
KLHL4
PAIP2
BRINP2
TRPM3
RSPH14
ADRM1
TLX3
TCHP
STK32C
LRRC27
LPP
PIN4
KLF17
FAM153B
SYNPO2
RNF43
PLAGL1
FAM120B
METTL7A
UGT1A6
ERGIC2
PCDHB13
KCNMB2
ZSWIM4
NUP214
RBBP6
ZNF763
JUP
RPL27
ZBTB18
YWHAQ
C2CD4D
CCDC92
LCOR
UBQLN4
LAMTOR2
KLHL5
STMN1
PCDHGC4
BBS7
TCF20
ARHGEF37
LPCAT4
TINAGL1
ST6GAL1
BTBD3
HACL1
BTD
ISL2
TCF4
ZDHHC5
VOPP1
CCPG1
C15orf65
HIP1R
ETFDH
C4orf46
CNR2
TRIM22
MMACHC
PPME1
C2CD3
SPHK1
PLEKHA5
SFPQ
MMRN1
MANSC1
LIN28A
KRT8
DPP4
YEATS2
CPVL
THEM4
HNRNPDL
ENOPH1
SPHK2
CPA5
ATAT1
RBM39
PRTFDC1
ZBTB6
BCAT1
ZCCHC12
HEXIM2
F11R
CNKSR3
TRAK2
STRADB
PSMB7
DLG2
ARHGAP24
NFE2
PELI1
GOLGB1
PYDC5
IFI16
CRISPLD1
CD200
WNT5B
DCLK1
CAAP1
RAD54B
FSBP
KIAA0895L
ZBTB8OS
RBBP4
NUFIP2
OAZ2
ZCCHC8
ZNF106
CCDC88A
EMC9
CNP
ZNF593
C1orf232
SEPTIN9
POLR3E
KMT5C
TSNAXIP1
RANBP10
GAS2L3
RFFL
CLEC9A
FAM102A
RND1
F11
PTPRD
PBLD
HNRNPH3
MBOAT2
SYBU
RAB25
KCTD6
BPNT2
CLIP1
DNM2
HBP1
ACTR1A
RAB34
ZFAND3
SMIM14
TNFRSF21
TLE3
WASF1
CDC40
C1R
PTPRZ1
KLF5
CDK5R1
H4C14
OLIG3
GGH
SNX27
IFTAP
TSPAN19
LRRIQ1
CLIC1
RGSL1
ST7
ZNF292
KIAA1522
EP300
RIPOR3
MAP2
UQCRQ
GDF9
ITGB8
CX3CL1
CDK12
GOLPH3L
PCDHB5
CHD8
FAT1
ERICH6B
CFLAR
PNRC1
PDP1
GFM2
ANKRD6
ZNF318
SCOC
HSPA13
ADGRA1
SPEM1
PRKRIP1
ZBTB20
BCL9
ZNF627
ZNF506
VMP1
PTRH2
TAGLN3
MTUS1
H2AZ2
EGFR
PBDC1
ZSCAN18
RSF1
AAMDC
RBMX
PACRGL
CITED2
WBP11
EMID1
C12orf60
C11orf58
ADNP
RBPJ
CALD1
TTC39B
APH1A
ABCB4
ZSCAN31
LTBP1
SLC6A9
GDF5
CEP250
DLX5
CHD7
TPCN1
IQCD
NR2F1
YIPF3
POLR1C
CHD9
ZBTB26
FRRS1L
MRPS30
EXOC5
AP5M1
TTF2
APC2
RRBP1
SLAIN1
STOX2
DCLRE1C
POLDIP3
NASP
SMARCA2
TMEM132A
UBTD2
PIMREG
PAXBP1
CENPA
EFCAB8
ILF2
EIF1AX
ARHGAP42
APBA2
ZNF277
DOCK4
PER2
ITGB1
TMX2
MED19
ZNF3
RNF44
LYSMD3
LNX1
OARD1
NFYA
IP6K2
SDHD
NKIRAS1
MAP1B
IGFBP2
ENOX2
GXYLT2
DDX5
ZHX3
AGMO
WDR33
CCDC172
RRAGD
MKRN3
RABGAP1L
PSME3IP1
NFIB
LMO4
INTS9
HMBOX1
TACC2
EXOSC2
CCDC171
ZBTB38
KCNN3
TUT7
KLHL24
CLCN5
G3BP2
ACSBG2
EEF1A1
AFF1
ZSCAN12
NLGN1
APPL2
INSYN2B
ADGRL2
NSMCE4A
GRAMD2B
SAPCD1
SPAG4
KDELR2
EIF3F
STAG3
PREX2
GPC2
DOCK9
LOC389199
AFAP1
ZNF180
AMOTL2
FZD1
MFSD6
GBA
PTX3
FILIP1L
IGF1
SET
TBC1D10B
MYLPF
VXN
HES6
SIRT4
CCDC130
SLC7A11
RSPRY1
PTH2R
TAX1BP3
EMC6
CPSF4L
CIAO2A
RBBP9
MCM10
GALNT8
WLS
HNRNPC
HNRNPL
CDK16
MTDH
TMPRSS5
H4C15
DYRK1B
BMPR2
C1orf189
XPC
XAB2
SAPCD2
LSM3
CA8
INSM1
NFASC
CYP4F11
SLC2A11
HEBP2
ABLIM1
STAU2
DDA1
ANP32E
SHROOM3
BSDC1
BLOC1S4
SUFU
PANK2
DNM1L
C1orf167
ZNF649
LDB1
INKA2
PLEKHG2
MCM7
AP4M1
QPRT
GTF2H4
RFX1
RAI14
NKAIN4
PEX11G
LRIG3
ABCA1
GPM6B
ZNF85
VGF
ZNF747
BAZ2A
HNRNPUL1
CCNG2
ZMAT2
SLC2A4
IREB2
COX8A
ELOVL5
TRIM54
MAPK10
ATAD2
ESR1
SLCO4C1
RTRAF
TRIB1
CLPB
ZBED5
SOX15
IPO4
CELF2
ZNF469
OVCH1
C2orf80
ERV3-1-ZNF117
ERV3-1
ZNF737
FMNL3
FABP7
PHYHIPL
SPTBN1
RPS11
FGF1
HEXIM1
CCDC146
SCNN1A
TARS3
INTS12
ID1
GSTCD
CDH6
FAM76B
CEP57
WTAP
SOD2
GJA1
SMARCB1
H4C9
FECH
PTCD2
MRPS27
ZNF576
IRGQ
RCOR1
MDK
MAT2B
TMEM143
SYNGR4
MEIG1
KANSL1L
IL1RAPL1
ZNF548
ERBB2
BTG1
SLX1B
SLX1A
BOLA2B
BOLA2
ZNF273
TBC1D31
TMEM220
LIFR
NARF
EHD4
SP5
ACTR3
MAD2L1BP
GTPBP2
CEP164
SLC25A25
KHDRBS1
SPPL2B
LSM7
TSPYL4
NEMF
MAST4
DSE
YWHAG
LRRC23
KHSRP
EIF3E
FNBP1L
SERPINB6
MAPK14
MAP3K9
EVI5L
UFSP2
USP53
RAPGEF5
COPS7A
TAL1
SALL4
KNL1
OGT
SCNM1
LYSMD1
VCP
ITPK1
SMC3
NODAL
TTI2
POU2F1
SRPRA
HDGFL2
UQCRC1
CCDC174
SLC11A2
ZSCAN10
NOL4
ARMC3
ZCCHC14
PPP1R15A
RAP1A
DLL1
CDK6
BZW2
PIP4P1
GPBP1
GNA12
FAM174A
ZNF101
SLC12A7
CSRNP3
CTH
ZNF687
TCIM
IL17RD
SLC4A2
CDK5
NF2
ACTR2
CTIF
DERA
NAIF1
NREP
EEF1AKNMT
RPUSD4
FGF19
FAM118B
OSGEP
NCLN
MEGF9
APEX1
EIF4E3
CHMP7
CDK5RAP2
DCSTAMP
ALPL
MEA1
SFT2D3
LY6G6D
H3C6
ARHGAP18
DMRTA2
ABCF3
UBAP2
DPPA2
CACYBP
SPRING1
RNFT2
WBP1
ASF1A
RAB11B
RGMB
PAG1
NSUN6
ARL5B
KXD1
GGPS1
FEM1A
ARID4B
NTMT1
RBP1
GPR137
CALCRL
AP3M2
ZNF8
SP1
TCF12
USPL1
SORBS2
NEK2
ACSS1
CLEC18B
GDPD2
DGKB
MRPL42
MCTS1
DMD
DCT
MGRN1
ABCA5
SLC20A2
MRO
GABARAP
ATF7IP
CTNNA2
RPL15
CLEC18A
RHOJ
RPA2
RNF122
CBX1
BTBD17
ARNT
GALM
ZIK1
NDUFB4
MRGPRX3
ZNF677
TMEFF1
PTCHD4
RTN4
ING4
ZNF668
FRMD4A
FMN1
DACH2
TSTD2
NCBP1
GRM4
ZNF268
ZNF91
ZNF286A
SPATA22
REEP6
PRPF38A
PCSK4
ORC1
MPND
CDH18
ZNF720
RAD23B
TREX1
NGDN
CALR3
C19orf44
ZNF724
NIN
LMAN2L
FAM185A
CPNE2
DAB2IP
MYOM1
STAU1
CCDC200
PLTP
CD300LB
RAB4B
PPDPF
BMPR1B
EIF4A2
ZNF250
PBX1
ZNF184
LTBR
ABHD2
ZCWPW1
MEPCE
SH3PXD2A
SALL2
PIH1D1
ZNF738
GAS8
DBNDD1
NNMT
ODF2
SNRPC
ZNF92
C15orf40
ASMTL
PRCC
AKR1A1
MS4A12
FIGN
KMT5A
GHITM
PTPN12
TBC1D9
TUB
PACSIN2
H4C3
TXLNG