ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX512370 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◣ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

SOX6
PIPOX
MTF2
SACS
SRRM4
DNMBP
OTX2
ADAM28
IER5L
NRARP
NDUFB5
MRPL47
ZNF532
NANOG
OBI1
HMGB1
FAM227A
CBY1
PRICKLE1
FLAD1
REST
FBXO40
CARHSP1
AHCYL2
FBP1
NADK
KIFBP
PSMD9
HPD
METTL11B
SNRPN
DDX17
USP44
NRG1
FUZ
FGD4
HESX1
SGMS2
SLC2A14
LINGO1
AFF1
BRINP2
HDAC9
SLC7A5
PLPP2
TDGF1
LRRTM3
GET3
ETV4
DAGLB
GADD45G
PDCL
ZNF343
SLFN12
FAM120B
IFRD1
HOXB1
ST18
PDPN
PMEPA1
ZFC3H1
THAP2
LRRTM4
PTMA
RFX4
AASDH
SMIM14
FNDC11
ARHGAP42
TIMP4
DDX3X
PITX2
CCDC169-SOHLH2
CCDC169
FBXL19
XK
GRK6
NOTCH1
WDR49
SMAD3
ZNF202
CER1
PXMP4
FGFR2
RAB34
CDH10
ZNF428
WNT5B
ESRP1
GPSM3
GCNT2
TOMM40
CHD6
DLX5
ZNF304
HES5
TUBB
PHF5A
ACO2
KCNN2
HGS
ARL16
SFXN1
LIN28B
CDKL5
FAM153B
CD200
TJP2
WDR74
MMACHC
CELSR3
GRHL2
ZNF677
IQCH
AAGAB
KXD1
ARID2
PALM2AKAP2
RGS3
RTBDN
SNAPC3
C20orf96
SLC10A2
DUSP12
MACROH2A1
MED12
MOBP
SLC25A36
TBC1D16
ARHGEF19
ARF4
DDX59
C1R
TSGA10IP
TIAL1
GSPT2
TUT1
MSC
ARID5A
TMUB2
TAL1
GDF3
ZNF101
TSNAXIP1
RANBP10
IL1RAPL1
ESR1
STOX2
NFE2
MAPK8IP3
VMO1
FAT1
TRIM38
HSPA13
ENOX2
EXOC5
AP5M1
DHX32
CELF3
ZSCAN9
USP53
SYAP1
UBQLN4
LAMTOR2
TRMT2A
RANBP1
GOLGB1
FILIP1L
SRSF7
THEM4
KMT2B
RAB30
SLC16A13
F11
UBOX5
FASTKD5
CAPRIN1
PCDHB5
EIF1AX
CDX4
GID4
ATPAF2
ANK2
CYTH2
BORCS6
CCDC124
SPIC
RIF1
ST6GAL1
PPP1R16B
ANAPC15
UQCRC1
SFPQ
PHOX2B
TRAK2
STRADB
JPT1
ERBB2
PGAP3
CDC14B
SPRY4
FEM1A
PDIA4
ETV6
IP6K2
EPHB6
DACT3
SLC33A1
CFAP20
FOXN3
STK32C
LRRC27
ZBTB8OS
RBBP4
IL23A
RPA2
CLCF1
APC2
SMARCA2
CDH9
GADD45A
JADE1
MSANTD4
PIN4
ARID1B
HECTD4
E2F7
SASH1
ZBTB45
PBX1
EMC9
AKIRIN1
SDHD
ID1
ACVR1
KIF3C
KIAA0895L
CEP41
DPPA2
WDR36
WNK3
ARIH1
CCL2
VCPKMT
TNC
DPPA4
ASMTL
DDX49
COPE
HES6
CCDC92
PELI1
ETV1
MCCC1
PSMB7
CRYL1
FOXP1
H3-3B
TBL1X
FERD3L
ZNF738
SNX16
KCNIP4
SDCCAG8
CEP170
SMARCAD1
MEIG1
CPVL
EP300
SALL4
G3BP1
RAD54B
FSBP
PAXBP1
WDR33
ZNF85
HMGN1
ZNF469
RAD23B
CTH
ZSCAN2
VANGL2
SEC14L1
DET1
PTPN12
SCOC
PLAC8
ZNF775
EMSY
ZNF763
CCDC174
PRCC
TMEM41B
KNTC1
ZCCHC12
ZNF749
TESK2
C1orf167
QPRT
RPUSD4
FAM118B
GRIN3A
PQBP1
TIMM17B
SLCO5A1
ZBTB40
WASF1
CDC40
ZNF3
SPHK2
CSRNP2
ACSL1
ZNF589
PAG1
SCNN1A
LTBR
HIP1
EGR3
ADGRA1
AMOTL2
ISL2
PER2
MEA1
RAB5C
THBS2
PES1
GEMIN7
TCN2
CTIF
PLA2G3
KDM2A
DPP3
INKA2
DDX20
TLE6
SLFN12L
DST
UBAP2
TBC1D17
AKT1S1
TDRP
OLIG3
MRPS30
NDUFB4
ELOC
EPB41L1
RSPH14
INSYN2B
WLS
NEBL
C22orf39
EIF3F
PPP1R15A
L3MBTL2
YEATS2
ZNF195
INTS9
HMBOX1
OGA
DLG2
EID3
HSP90AB1
OR51H1
TES
CHD8
NKAIN4
CHMP4B
NEUROG1
AUH
BCL9
N4BP2L2
FAM47E
FAM47E-STBD1
DCLK1
ADD2
ADA2
SPATA12
YLPM1
H2AZ2
SHROOM3
WBP1L
CDK6
KDM3A
ADAR
TLE3
KLF5
SPAG4
VPS50
HEPACAM2
RPL9
LIAS
CCN2
RBMX
CCDC172
IL17RD
RAB4B
CNGA1
TRIM22
PNRC1
XAB2
PLAGL1
DPYSL2
ZNF175
CTNND2
PIF1
NDUFA2
IK
TRAPPC3
MAP7D1
VIPAS39
AHSA1
OSR2
DHRS3
RPL27
SET
ARMC3
ESRRA
SOX5
PYDC5
IFI16
OXA1L
TCHP
TCTN3
BTG1
OSGEP
APEX1
ZNF630
NDUFS5
MTRNR2L2
PTX3
KLHL13
ATAT1
ZCCHC8
SNX27
ACCS
IFIT3
ZSCAN10
FZD2
TRPM3
KLHL5
BAMBI
CA8
TSPAN14
WDFY2
VEZT
FGD6
ING4
OXNAD1
DPH3
ESR2
RNF19A
DIAPH3
NR2F1
PTGFRN
CEP63
ANAPC13
PDP1
TTF2
ZNF358
CALD1
SYNPO2
HEBP2
TMEFF1
SSR4
IDH3G
CIART
SH2D3C
TFDP2
CABYR
NKIRAS1
RPL15
ICE1
IGSF9
ALDH7A1
DHX8
REEP6
PCSK4
KATNAL2
PIAS2
ANKRD54
USE1
ZNF106
PRPF19
COPS7A
GPBP1
LSM10
UFD1
CDC45
ZNF608
SEPTIN9
ZMAT2
EHD4
PIP4P1
TBC1D9
CCT2
CD2BP2
ZIK1
SLC25A11
RNF167
NUP160
ACTR1A
G3BP2
ARNT
NCOA4
RBMS2
CEP70
ZZEF1
CYB5D2
SLC39A10
ZNF493
GSK3A
GIMAP4
GSN
RNF213
AKR1A1
FREM2
BBS7
GALM
FDPS
CFL1
PRPF38A
ORC1
RPS6KB2
CDK5RAP3
GPC6
SFRP2
CIAO2A
GTF2H4
FAM76B
CEP57
CDHR3
OLFM2
PBLD
HNRNPH3
ELOVL5
NEK2
RASAL2
ZNF250
ZNF43
PGBD2
CCNG1
MARCKS
PRRC2B
VASH2
IPO11
C11orf58
ZNF649
GPR137
GBF1
EGFR
RNF122
GHITM
FBXO46
ZNF430
ZFAND6
HMGB3
TAX1BP3
EMC6
SCNM1
LYSMD1
PCYT1B
CITED2
LLGL1
TMX2
MED19
SLC2A4
DEDD
MMEL1
NUCKS1
NOTO
BLOC1S4
CALR3
C19orf44
SRPK2
UGT2B10
ARPP19
PWWP2A
PRKRIP1
MCTS1
CD300LB
TBCEL-TECTA
TBCEL
L3MBTL4
UBR2
RDH11
PSMD10
ATG4A
SH3GL3
SPAG9
PAIP2
SLCO4C1
UQCRQ
GDF9
GFM2
H4C9
RBP1
TMEM33
FSTL5
TCF4
FRRS1L
SUFU
SLX1B
SLX1A
BOLA2B
BOLA2
BZW2
TXLNG
BOLA2-SMG1P6
ANKMY2
GFOD1
MAP3K12
RPLP0
JUP
MCM10
HDGFL2
KDM1A
ZNF785
ZNF300
ZBTB37
PHF12
BTRC
OTUD5
DDA1
PTCD2
MRPS27
IFRD2
ZNF500
FAM83D
MBNL3
ASIC2
WFDC8
PACSIN3
ZNF814
FOXO6
HSPH1
CCDC30
CDC7
WDR59
RBM6
OR51M1
GPRC6A
CDK16
GCDH
YTHDC1
PHB2
PSKH2
NMT1
DCAKD
ARHGAP19
SIX2
CDK5R1
SPRED3
GRB7
ZNF836
ATP6V0A4
ILF2
HNRNPL
NEMF
ILF3
TCAIM
POLB
STMN1
ZNF284
EFCAB8
RASSF8
LYRM7
PRDM2
SLX4IP
FBXO38
ZNF135
DGLUCY
DUSP7
LARS1
METTL3
CTU1
CA5B
WDR89
ZNF506
TRAF7
TMEM123
HLA-DRA
JAG1
HLTF
SPRING1
RNFT2
MRPL42
FAM185A
ZNF335
PHF14
UBA1
MAGED1
TNKS
ZNF627
MPZL2
TP53I3
KAT7
MAP1B
XPC
LSM3
CLPB
ANAPC5
PJA2
PPP1R12C
WBP11
C12orf60
EVI5L
PLTP
GUCY1B1
DNAH2
SDR39U1
INTS10
OGT
C7orf33
MUSK
CPSF4L
COX8A
VCP
SF3B5
TLX3
ZNF576
IRGQ
MYH2
SLC15A2
GOLGA8A
PLCH1
ZNF292
ITGB1
NODAL
MRO
ZNF668
NME1
ZNF646
SSB
PDIK1L
TMEM237
STIP1
USP1
OCIAD1
ERGIC2
PIMREG
CBX1
ZNF253
SAT1
RBAK-RBAKDN
RBAK
WWOX
ZWINT
H3C15
H3C14
ANKZF1
RBBP6
PEX11G
QTRT2
CCDC191
C9orf72
RADIL
PRR14
ZNF806
RABGAP1L
STAU1
ZNF197
DYNLL1
OIP5
NUSAP1
RPS6KA5
ECT2
ZNF585A
GOLGA6L4
DNAJC6
SINHCAF
TNFRSF21
TACC2
EXOSC5
BCKDHA
HIPK1
ZNF56
BAAT
KCNMB2
PLEKHG2
PCNX3
PPP1R12B
DAAM1
ZBTB8B
WDR86
GRIPAP1
CTTNBP2NL
GTPBP1
SH2B3
HNRNPA0
OVCA2
NR2E1
MEF2C
ATAD2
EIF3E
MAP3K9
PCCA
NOP16
HIGD2A
ZNF695
PPP2R5C
ANKRD28
NLGN1
HNRNPUL1
ZNF791
ZNF490
NUDT3
ZFYVE26
GSPT1
CRADD
SARNP
ORMDL2
LGR6
TP53BP1
PSMB10
CTBS
CRYBA2
SHF
DNAJC16
DARS2
CENPL
CDH7
AVEN
SLC25A25
NAIF1
SC5D
PGM2L1
ZNF513
GPR55
LOC102723996
ICOSLG
HSPA5
ZNF747
ZNF548
FAM174A
ACYP2
STAT3
PSME4
RRM1
CEP170B
ZDHHC5
ADNP
APH1A
IPO4
CCDC77
ZSCAN16
COX14
MANF
TBC1D8B
ALPL
C6orf132
ZNF140
SERPINI1
PDCD10
ZNF100
CYCS
ZC3H6
ZBTB6
CNP
TUT7
CLCN5
FAM220A
GOT1
SYT12
GPKOW
AK4
HEXIM2
GATB
TAF1A
TMEM154
PDCD2
ACTR5
EIF4E3
ZNF8
ZNF720
KMT5A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC35B4
KLHL31
MOSPD3
KLHL4
GALNT8
TTI2
SASS6
OS9
CDON
VASP
NARS1
CCDC146
YDJC
TUBG1
RETREG3
PUM3
MAPK7
B9D1
ZNF547
TRAPPC2B
INVS
ERP44
STRA6
VGLL4
NUFIP2
RSF1
AAMDC
NASP
RGMB
SRRM1
PRKCSH
CCDC151
ZNF708
LPP
TTC39B
LOC389199
AFAP1
ZNF273
RAB11B
ZNF286A
ZNF92
WDR87
SIPA1L3
ZNF519
PKDCC
PSMD1
ARL4D
INSIG2
BET1
SLC25A28
CLDN2
IRF2
SYNCRIP
LIN28A
RTN4
TSPAN13
PCDHA11
UTP23
SEL1L
RIC8B
LPAR6
TPK1
ZNF107
RBM25
CCNE2
VOPP1
SMARCB1
SNRPC
LTA4H
MRPL1
ZRANB3
R3HDM1
RBM42
ZNF143
NFYC
E2F3
FZR1
TUBB4B
WNT2B
LPCAT4
NOL4
MRPS23
OSBP
TRAPPC6A
BLOC1S3
RACGAP1
LDLRAD4
KAT6B
NDST1
LDB1
ZNF189
MRPL50
RCAN1
HNRNPA1
CBX5
MTR
INPP5B
CRHR2
ERMN
ZNF254
ANP32E
ZNF737
DGKB
HAGH
FAHD1
TOR1A
TMEM44
TMEM115
GUK1
TBCCD1
DNAJB11
TESK1
RBM39
CCDC88A
POU2F1
COPS3
DNAH14
C1orf174
ZSWIM4
POLDIP3
UBTD2
UFSP2