ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

GRK6
MTRNR2L2
MTRNR2L8
FOXO6
G3BP1
GET3
DACT3
EMSY
CYTH2
RBBP6
SLC25A11
RNF167
ZNF576
IRGQ
CCT2
KIFBP
OSBPL1A
FAM102A
SLC25A25
NAIF1
HGS
ARL16
SPHK2
ZBTB2
H3-3B
CLP1
SYAP1
ETV4
RFX4
DICER1
PLTP
ZSCAN18
HMGB1
IREB2
CTNND2
PIH1D1
PELI1
FAM227A
CBY1
WBP11
C12orf60
TESK2
NGDN
REEP6
PCSK4
MEA1
TMX2
MED19
TBRG4
HEXIM2
CEP41
CDK16
ETV1
MTF2
NF2
RSPH14
BSDC1
PTMA
CHMP7
PSMD3
CHN2
PPME1
C2CD3
EPHB3
MTRNR2L9
PFKM
HNRNPH1
YLPM1
HSPH1
H2AZ2
BTG1
SDCCAG8
CEP170
INTS9
HMBOX1
HNRNPL
TMUB2
NUP214
IPO11
PWWP2A
TPCN1
IQCD
TMBIM6
DCTN2
NRARP
TBC1D10B
MYLPF
DYNLL1
CCDC169-SOHLH2
CCDC169
SENP8
MYO9A
TRIM28
EGR3
NRL
DCAF11
GTPBP1
CARM1
TOMM40
TAX1BP3
EMC6
AP3M2
TXLNG
TRDMT1
ACTR1A
EHD4
PIK3R3
CDK12
SPEM1
TMEM143
SYNGR4
MAD2L1BP
GTPBP2
UFSP2
ABHD2
RNF26
DDA1
TMEM41B
TUT1
FXR2
SHBG
ELL
RGPD2
RGPD1
PTH2R
ZNF672
CTTNBP2NL
SPAG4
ACTR2
SENP2
HNRNPC
HES5
HACL1
BTD
ZNF286A
SAXO1
RRAGA
ZCWPW1
MEPCE
ETV5
TSPYL4
DSE
C1orf127
ARHGAP19
WDR81
DHX8
FAM181A
OGA
KMT5C
TENT5C
CNOT3
HDGFL2
MRPL45
ZNF775
ZCCHC8
TPGS1
PPP1R16B
RFX1
NUBP1
RBM23
ZDHHC5
SHC1
CKS1B
STAG3
GPC2
TEPSIN
NDUFAF8
TCTN3
PODNL1
DCAF15
PIN4
ZFC3H1
THAP2
ANKRD6
RFX2
ETFB
TOMM40L
VEZT
FGD6
HES6
WBP1
LSM10
ZSCAN20
ABCB4
RBM39
SLC25A44
PIF1
CDC5L
RNF169
TUBB
IFRD2
CHD6
SPRY4
MSANTD4
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DMWD
GNA12
NEURL4
RPS13
NOTCH1
POLDIP3
NOL4
BMF
CCDC61
ZSCAN2
RAB5B
PC
MPRIP
NAA80
HYAL3
RRP9
PARP3
BANP
WDFY2
CRISPLD1
EMC9
PAIP2B
MICOS13
HSD11B1L
DNM2
TBC1D31
LRRC23
SELENOF
HS2ST1
FBXO46
JOSD2
GFRA1
KIAA0895L
EVI5L
GCDH
C12orf71
EPRS1
UVRAG
WDR49
SLC33A1
SMUG1
RPS23
ATP6AP1L
SESN2
TMEM256
XPC
LSM3
SP1
NUP62
IL4I1
ATF5
PPP2R1A
TCF4
DOHH
ZNF195
ZFYVE1
CLPB
KHDRBS1
H2AC19
H2AC18
TMEM91
B9D2
CDC25A
DUSP1
LRRC45
CENPX
FGD4
ZNF358
ZNF548
ASMTL
NEMP1
DDX17
CCN2
H2BC8
H2AC8
KBTBD6
VPS26C
ZBTB20
SEL1L
NDUFB5
MRPL47
MOSPD3
CLIP1
PRCC
NDUFS8
TAF13
MRPL24
HBP1
RNF5
AGPAT1
GGPS1
ARID4B
CDH2
KDM2A
ERGIC2
MAFG
WDR59
UBE2S
KNTC1
RPL27
PDP1
BLOC1S4
HIF1AN
JAG1
SUFU
RPUSD4
FAM118B
NDUFA5
TRAPPC3
TICRR
ELK1
HEXIM1
KHSRP
NSUN3
DHFR2
BABAM1
CELSR3
ILF3
SRRM1
HDAC9
IER5L
TAGLN3
TRIOBP
BRCA1
MPV17L2
FAM219A
DNAI1
TSNAXIP1
RANBP10
TRMT1L
SWT1
ZNF823
SPAST
SYMPK
EHBP1
NAA40
FOXA3
CD2BP2
SINHCAF
FAM185A
TOR2A
TRAF7
ATF4
CDK4
SRF
SLC35E2B
RAB5C
WBP1L
CFL1
LUC7L2
FMC1-LUC7L2
FMC1
SF1
PYCR3
MMRN1
NASP
TREX1
NNMT
NFATC2IP
MEGF8
EPC2
KIFC1
ITGB1
NCLN
GID4
ATPAF2
RPL35A
IQCG
ADAT1
SIX2
MMACHC
IFTAP
CCDC146
PIP4P1
COPZ1
PHF23
RBM15
SLC35B4
LPIN2
ZSWIM4
DNM1L
KBTBD3
AASDHPPT
BBS7
RPS11
DGLUCY
IP6K2
GHITM
CIC
CCNT1
PCF11
UBXN4
RPS6KA5
NUMB
SMARCAL1
PHB2
H2AX
UBE4B
LIN52
ALDH6A1
ZNF653
RPL29
ARIH1
PRKRIP1
ING4
RLF
ELP5
CTDNEP1
ZNF547
TRAPPC2B
SPC24
BFSP1
CAMTA1
COX8A
IPO4
SPRING1
RNFT2
PRPF38A
ORC1
EXOSC5
BCKDHA
GBF1
PPP1R35
SMARCAD1
PPP1R15A
CALR3
C19orf44
VGF
CNIH4
KATNB1
PI4K2A
DTD2
TUBA1A
GNB2
TMEM109
E2F1
PKNOX1
ZBTB38
C1orf189
PANK2
ZMAT2
ZNF189
MRPL50
ERCC6L2
CDK5RAP3
EMC3
PDXP
TSPYL1
POLRMT
GADD45A
SCOC
MTCH2
GOLGA5
USP1
TCERG1
DAD1
INTS4
ESYT1
FOS
FLAD1
ADAR
TRAK2
STRADB
PHF12
MXD1
PPP6R3
SAC3D1
MTMR12
UBQLN4
LAMTOR2
TLE3
UBR2
TENT5B
GADD45B
RND1
EEF1AKNMT
MAGI1
STRADA
PTP4A1
CNN3
CFAP20
DISP3
SMARCB1
SRP14
PUM3
BBS12
RAB8A
MPND
LMAN2L
PCNX3
LARS1
ZNF513
WDR87
SIPA1L3
MAP2K7
HIBADH
UBE2F
CDC6
PDE4B
PAIP2
RRBP1
ORAI3
ZFP36L1
POLR3H
SIDT2
ZSWIM1
FBXL19
ANK2
CX3CL1
VMP1
PTRH2
EIF3F
CDK5RAP2
WDR19
MECP2
KANSL1L
TCIM
KMT5A
PCBP2
SCHIP1
SNRPD2
QPCTL
ARFGAP2
FBXL12
TTF2
FANCC
PCM1
OSBP
NUCB1
FRAT1
NUMA1
LRTOMT
PRPF19
ATG2A
KIF3C
PGM2L1
RC3H2
LIN37
DDX39A
RPS26
PMM1
NAA35
E4F1
DGUOK
ERCC1
ZSWIM8
U2SURP
MORF4L2
POLK
CERT1
PSMC4
PTBP1
PGM1
CEMP1
ALK
PCYT1B
NEBL
TMEM114
GPBP1
MTRNR2L10
EFHC1
FUZ
SRPRA
SLC4A2
CDK5
ZBTB5
DDX49
COPE
ANKRD54
PDK3
WBP2
DGAT1
HSPA1B
EFCAB6
CUL3
TSPAN19
LRRIQ1
UBL7
PGAP2
TBC1D23
BUB3
PGP
TSPAN17
CENPC
NR2F1
HNRNPUL1
ABCA5
DUSP7
RPS24
CCNG1
RACGAP1
EFR3B
CAMK2D
C16orf91
WIPI1
RALGAPA2
C10orf120
ACTN4
SACS
LRRTM3
ZBTB37
ZNF138
TRAPPC6A
BLOC1S3
PPM1E
EGLN2
PPP4R3B
MRPL17
SASH1
ABAT
BORCS6
RSF1
AAMDC
FABP7
FOSB
GPR180
ZNF417
RNF10
ZNF254
EP300
ERICH6B
EIF4A1
USP30
TCF7L2
DUSP6
ANKHD1-EIF4EBP3
ANKHD1
DAZAP1
KBTBD7
GPR3
KDM4B
NARF
TM9SF4
MRPL2
KLC4
SDE2
YIF1A
WDR74
ITGB8
SCAF11
KIF27
NBPF1
BRD3OS
FAM98A
ZSCAN9
ANK3
SSR4
IDH3G
LYRM7
SLC39A9
ERH
FH
HP1BP3
AP3D1
CCDC181
EPB41
EFTUD2
CCDC103
PKD1
DPP3
MCM10
L3MBTL2
GPAT4
DOT1L
PPP1R21
ZNF593
C1orf232
CIAO2A
XAB2
DNAJC12
DHX16
METTL16
C9orf85
ABHD17B
TUBB4B
ZNF862
NPAT
ATM
CAPZA2
CHD8
ZSCAN31
SPTBN1
WDPCP
DNTTIP2
MDH1
TAB1
SNAPC3
ESRRA
DTNA
NEDD9
VXN
TMEFF1
ZNF140
ANKRD36
ABI2
HNRNPA1
CBX5
DMXL1
USF3
WASHC3
ZBTB48
CXXC1
PARS2
ETFDH
C4orf46
ADNP
ILF2
C2orf80
STAU1
RBM22
ENSA
MAP3K13
DDX27
ACTL6A
AKTIP
PSMC5
FTSJ3
SAP30BP
RECQL5
ZNF738
CTNNA1
PGLS
CREM
LRRTM2
EPHB1
UBE2C
NATD1
STARD4
RPUSD1
MFN2
KAZALD1
CHTF18
NME1
ZNF764
NBAS
CDCA4
GPN3
FAM216A
TMEM115
STX12
P3H1
LYPLA1
SUCLG1
FZD2
AKAP9
LDB1
PEX11G
FEM1A
MRPS14
TPRKB
ZNF416
COG3
NDUFAF5
ESF1
USP54
UPF3B
UBA52
PDIA4
CEP63
ANAPC13
MAPK14
TNRC6B
COX7B
RMND1
ARMT1
CACUL1
SMPD2
PPIL6
RPL9
LIAS
HNRNPR
RFWD3
ALG8
FZR1
EBNA1BP2
CFAP57
RPL21
PCBP3
DPYSL5
ATG5
UFD1
CDC45
CCDC130
ANP32E
INTS12
GSTCD
ZNF709
NUDT2
KIF24
ZNF84
BAG6
APOM
ISY1-RAB43
ISY1
SLX4
FICD
ARL13B
RNF40
CCDC189
SPSB2
UBL5
RFC2
EIF3D
TM2D2
ADAM9
SYNCRIP
PES1
MEGF9
ACYP2
SARNP
ORMDL2
PSME4
VTA1
NMBR
JAM2
PMVK
TMEM258
FEN1
FTSJ1
SPATA24
DENR
GTF2H2
POLR2E
CHMP5
BAG1
RBX1
ZNF304
ARF4
ZNF106
GDF5
CEP250
SAPCD2
TUBG1
RETREG3
YPEL1
IFI6
CNNM2
NAPA
WDR62
THAP8
BSN
SLC25A36
ADRM1
COPS7A
C17orf77
DDX10
PRRG2
NOSIP
FAM200B
UVSSA
TXNDC16
FARP2
FAM86B1
ALDH7A1
ST7
SALL4
CACYBP
ZIK1
SASS6
PNN
TADA1
YPEL5
XPO7
PRR14
RWDD1
NABP2
HSPBP1
IPO9
AVPI1
ALAD
WFDC8
ANAPC15
LOC389199
AFAP1
PIK3C2B
DCLRE1B
AP4B1
NUDCD3
PDAP1
BUD31
LONP1
CATSPERD
SPEF1
TIMM10
AP2S1
EIF2S3
ING2
C1orf21
CREB3L2
SMIM13
SCLY
PSMD2
DNAAF3
TIAL1
CLIC1
RBMX
LMO4
USPL1
PHB
PRMT5
NCL
LMBR1L
TIMM10B
THRAP3
SETD3
MXD4
CCNK
SRSF7
ZNF506
CEP128
CBX8
RRAS
PWP1
ZNF688
POLA1
DNAJB5
TMEM170A
GGCT
SFPQ
MTUS1
CENPA
EIF1AX
KNL1
CRADD
RPL23A
MRPS31
GRWD1
DNAJC21
LENG1
ATP5F1B
SARS2
MRPS12
RNF20
MBD4
IFT122
SLC36A1
PNRC1
FAM72D
FAM72C
ALS2
UTP3
DRG2
SLC35A5
ATG3
GUK1
RPIA
ZNF484
FAM3C
DENND4A
RHEBL1
SHOC2
ZNF782
MST1
BBIP1
PDPN
ITPRIP
ENOX2
ASF1A
HNRNPAB
ACTL6B
TRMT44
TMF1
ACOX3
ZWINT
RGR
HNRNPD
SVOP
SPDYE14
SPDYE10P
CASTOR2
ZNRF1
SERTAD3
MTHFD2
SMG7
CLIC4
NSRP1
PSMA6
SENP3
FAM76A
BDH2
TCOF1
SOCS3
MTOR
VPS4B
TMED4
RNF7
FAM160A2
CDIPT
ZNF474
MAT2B
PAK1IP1
C6orf52
FN1
SDR39U1
SCAF1
CCDC12
ZFAND4
FGGY
ERMN
TRMT2A
RANBP1