ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

WDR74
FAH
CYP4F11
SNX16
SCML1
MTF2
SACS
ATXN2L
GADD45G
CAMTA1
ANKRD18A
HMGB1
CSRNP2
STK32C
LRRC27
NRARP
SPIN1
HDAC9
CAPRIN1
HES5
HMGN1
HNRNPDL
ENOPH1
CCNG2
FABP7
BZW2
ANKMY2
PPP1R15B
ARID2
KRTAP4-12
SLC6A9
ARIH1
PDE4B
KLF7
CITED2
ITPK1
LOC100996750
KRTAP4-7
ZNF717
RGR
ZNF775
NEU4
ACSL1
KRTAP4-8
KRTAP4-11
DNMBP
OAZ2
RTN4
RUBCNL
FAM181A
ZNF277
DOCK4
SPDYE14
SPDYE10P
TUBA1C
ALDH7A1
CDC34
IQCH
AAGAB
MTDH
TSPAN13
KDELR1
DDX17
ITPRIP
PCBP4
GADD45A
AGO1
ANKRD18B
NDRG2
VANGL2
KRTAP4-4
CTAGE15
ATAT1
APC2
KRTAP2-4
HBP1
PTPRK
SIPA1L1
OR8U8
OR8U1
UBTD2
STX6
POTEH
CTAGE8
CTAGE4
STAU2
KMT2B
MARCKS
PAQR6
LPP
CDK5R1
FMNL3
KRTAP4-5
NDUFB5
MRPL47
KDM2A
HES6
NREP
RHOJ
LRIG1
ADRM1
TMPRSS5
KRTAP1-1
RGS3
SPHKAP
LRRN1
KIF21A
KCNQ3
ESRRA
FANK1
RIPOR3
MAP7D1
PTGS1
TRIB1
TRDMT1
ZNF358
VOPP1
CCDC88A
ADNP
NFIB
PHYHIPL
NCOA4
C16orf46
NACC1
EHF
TEAD2
KRTAP2-3
KRTAP4-6
KRTAP2-1
PTMA
PLEKHG2
CCSER1
FUZ
ZBTB25
ZBTB1
PIPOX
OR2A7
TNRC18
COX20
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
KRTAP2-2
FAM227A
CBY1
NUDT19
KRTAP4-9
CTAGE6
PLCG1
TES
LIMCH1
HSPH1
ITGB8
SRSF6
CASTOR2
STAG3
GPC2
LZTS1
AMMECR1L
RNF44
CLEC18B
GPAT4
PFKFB3
BCAR1
SHF
TRMT2A
RANBP1
TAS2R41
TMEM132A
CLEC18A
FAM76A
CTAGE9
ZNF677
MIDN
CNN3
ZNF763
RRBP1
UQCRC1
FRAT1
KRTAP9-6
SNAPC3
ABAT
DDX5
MEGF9
TCF7L2
CD24
UBE2E3
SLC44A5
OTOP1
IRAG1
OR56A1
ATXN7L2
TEPP
KRTAP9-8
SHTN1
FBXL19
DYRK1B
POLR3E
CRIP2
ZSCAN2
FAM102A
PLXNB1
SOX6
ACVR1
SRSF7
POLB
ZSCAN9
PYDC5
IFI16
ST7
ANKRD6
KAT6A
CDK2AP1
ADO
CREBZF
TNFRSF11B
KRTAP1-3
COLEC10
ARNT2
CHD6
USP22
LOC647264
TMEFF1
NELFCD
OR4F4
PIMREG
ACSS1
FSCN1
TUBB2B
POTEM
NOTCH1
TMPRSS7
SENP8
MYO9A
PTPRD
NSUN6
ARL5B
SFXN5
TUBB
RSF1
AAMDC
EEF2K
POLDIP3
SYNCRIP
CELSR3
KMT5B
LMO4
FILIP1L
CDH18
PDE4DIP
SCD
DST
METTL11B
REST
OTX2
WFDC8
GRK6
DNMT3B
NRG1
MOBP
ETV1
FGD4
ADAM28
GSN
PPP1R16B
FLAD1
SNRPN
PLPP2
IFRD1
MTRNR2L2
PDPN
ETV4
OBI1
TMCC1
CELF3
SRRM4
HESX1
DHX32
FZD2
PRICKLE1
MTRNR2L8
LIN28B
NADK
FBP1
BFSP1
LRRTM3
PSMD9
HPD
PHF5A
ACO2
SFRP2
TIMP4
RFX4
TDGF1
USP44
CCT2
PMEPA1
ESRP1
WDR49
ZFC3H1
THAP2
TNC
HGS
ARL16
IER5L
FGFR2
PLEKHG1
FBXO40
ZNF343
SASH1
TBC1D16
MED12
NDUFS5
NDST1
KIFBP
CYTH2
OSBPL1A
CTNND2
GPSM3
GDF3
GET3
DGLUCY
PDCL
CEP41
DICER1
CDC14B
TOMM40
DAGLB
CER1
PGK1
ADA2
EPB41L1
ZNF304
CARHSP1
ERMN
TMEM41B
SLC33A1
WBP1L
VENTX
NRCAM
H3-3B
PCYT1B
TJP2
ZNF532
CCDC169-SOHLH2
CCDC169
JPT1
DACT3
WDFY2
SLC10A2
ZNF195
AUH
CHN2
KDM3A
ANK2
LRRTM4
SPRY4
GIMAP5
CCN2
RGPD2
RGPD1
SGMS2
FOXP1
SLCO5A1
TESK2
NANOG
MSANTD4
C20orf96
SLC7A5
RASAL2
ETFB
C1orf127
NEBL
UFD1
CDC45
AASDH
DPPA4
SYAP1
PCDHB8
SLFN12
PXMP4
TMUB2
ST18
SIX2
LLGL1
RNF19A
AK4
ZNF428
ACCS
MACROH2A1
PALM2AKAP2
PRRC2B
PPP1R18
DTNA
PITPNM2
DUSP12
ARID5A
SLC16A13
CCL2
MCCC1
C22orf39
ETV6
FOXO6
KCNIP4
ZFYVE1
SMAD3
KRTAP3-1
SLC2A14
IFIT3
PDIA4
VASH2
DET1
JAG1
VEZT
SLC25A36
FGD6
PLCH1
RIF1
CFL1
PIK3R3
GFRA1
ANAPC15
CDH10
SLC25A11
RNF167
IL23A
NUP160
RTBDN
MMP10
CD2BP2
NEDD9
GSPT2
TUT1
SAXO1
RRAGA
SH3GL3
RAB30
SDCCAG8
CEP170
RIMBP2
OGA
TMEM114
KCNN2
SPAG9
GRHL2
HLTF
DHRS3
WDR36
TIAL1
CNGA1
PES1
ZNF254
SPATA12
PRR5L
MEF2C
HOXB1
TFDP2
DHX8
PKNOX2
EGR3
CTTNBP2NL
AKAP9
MOSPD3
GEMIN7
PWWP2A
AHCYL2
GCNT2
CFAP20
YLPM1
PDE4D
CLCF1
IPO11
CCDC167
ZBTB45
PRM3
SINHCAF
RNF213
ZNF202
SPIC
TCN2
BORCS6
ZNF608
TIA1
ADAR
SOX5
DISP3
LYPD1
SMARCAD1
KNTC1
PIF1
RGS12
G3BP1
CEP63
ANAPC13
MAP2K5
EMSY
ARF4
AKIRIN1
SYTL2
DPP3
ZBTB40
TSGA10IP
ZNF474
DDX3X
KLHL4
PAIP2
BRINP2
TRPM3
RSPH14
TLX3
TCHP
PIN4
MTRNR2L9
KLF17
FAM153B
SYNPO2
RNF43
PLAGL1
FAM120B
METTL7A
UGT1A6
ERGIC2
PCDHB13
KCNMB2
ZSWIM4
NUP214
RBBP6
JUP
RPL27
ZBTB18
YWHAQ
C2CD4D
CCDC92
LCOR
UBQLN4
LAMTOR2
KLHL5
STMN1
PCDHGC4
BBS7
TCF20
ARHGEF37
LPCAT4
TINAGL1
ST6GAL1
BTBD3
HACL1
BTD
ISL2
TCF4
ZDHHC5
CCPG1
C15orf65
HIP1R
ETFDH
C4orf46
CNR2
TRIM22
MMACHC
PPME1
C2CD3
SPHK1
PLEKHA5
SFPQ
MMRN1
MANSC1
LIN28A
KRT8
DPP4
YEATS2
CPVL
THEM4
SPHK2
CPA5
RBM39
PRTFDC1
ZBTB6
BCAT1
ZCCHC12
HEXIM2
F11R
CNKSR3
TRAK2
STRADB
PSMB7
DLG2
ARHGAP24
NFE2
PELI1
GOLGB1
CRISPLD1
CD200
WNT5B
DCLK1
CAAP1
RAD54B
FSBP
KIAA0895L
ZBTB8OS
RBBP4
NUFIP2
ZCCHC8
ZNF106
EMC9
CNP
ZNF593
C1orf232
SEPTIN9
KMT5C
TSNAXIP1
RANBP10
GAS2L3
RFFL
CLEC9A
RND1
F11
PBLD
HNRNPH3
MBOAT2
SYBU
RAB25
KCTD6
BPNT2
CLIP1
DNM2
ACTR1A
RAB34
ZFAND3
SMIM14
TNFRSF21
TLE3
WASF1
CDC40
C1R
PTPRZ1
KLF5
H4C14
OLIG3
GGH
SNX27
IFTAP
TSPAN19
LRRIQ1
CLIC1
RGSL1
ZNF292
KIAA1522
EP300
MAP2
UQCRQ
GDF9
CX3CL1
CDK12
GOLPH3L
PCDHB5
CHD8
FAT1
ERICH6B
CFLAR
PNRC1
PDP1
GFM2
ZNF318
SCOC
HSPA13
ADGRA1
SPEM1
PRKRIP1
ZBTB20
BCL9
ZNF627
ZNF506
VMP1
PTRH2
TAGLN3
MTUS1
H2AZ2
EGFR
PBDC1
ZSCAN18
RBMX
PACRGL
WBP11
EMID1
C12orf60
C11orf58
RBPJ
CALD1
TTC39B
APH1A
ABCB4
ZSCAN31
LTBP1
GDF5
CEP250
DLX5
CHD7
TPCN1
IQCD
NR2F1
YIPF3
POLR1C
CHD9
ZBTB26
FRRS1L
MRPS30
EXOC5
AP5M1
TTF2
SLAIN1
STOX2
DCLRE1C
NASP
SMARCA2
PAXBP1
CENPA
EFCAB8
ILF2
EIF1AX
ARHGAP42
APBA2
PER2
ITGB1
TMX2
MED19
ZNF3
LYSMD3
LNX1
OARD1
NFYA
IP6K2
SDHD
NKIRAS1
MAP1B
IGFBP2
ENOX2
GXYLT2
ZHX3
AGMO
WDR33
CCDC172
RRAGD
MKRN3
RABGAP1L
PSME3IP1
INTS9
HMBOX1
TACC2
EXOSC2
CCDC171
ZBTB38
KCNN3
TUT7
KLHL24
CLCN5
G3BP2
ACSBG2
EEF1A1
AFF1
ZSCAN12
NLGN1
APPL2
INSYN2B
ADGRL2
NSMCE4A
GRAMD2B
SAPCD1
SPAG4
KDELR2
EIF3F
PREX2
DOCK9
LOC389199
AFAP1
ZNF180
AMOTL2
FZD1
MFSD6
GBA
PTX3
IGF1
SET
TBC1D10B
MYLPF
VXN
SIRT4
CCDC130
SLC7A11
RSPRY1
PTH2R
TAX1BP3
EMC6
CPSF4L
CIAO2A
RBBP9
MCM10
GALNT8
WLS
HNRNPC
HNRNPL
CDK16
H4C15
BMPR2
C1orf189
XPC
XAB2
SAPCD2
LSM3
CA8
INSM1
NFASC
SLC2A11
HEBP2
ABLIM1
DDA1
ANP32E
SHROOM3
BSDC1
BLOC1S4
SUFU
PANK2
DNM1L
C1orf167
ZNF649
LDB1
INKA2
MCM7
AP4M1
QPRT
GTF2H4
RFX1
RAI14
NKAIN4
PEX11G
LRIG3
ABCA1
GPM6B
ZNF85
VGF
ZNF747
BAZ2A
HNRNPUL1
ZMAT2
SLC2A4
IREB2
COX8A
ELOVL5
TRIM54
MAPK10
ATAD2
ESR1
SLCO4C1
RTRAF
CLPB
ZBED5
SOX15
IPO4
CELF2
ZNF469
OVCH1
C2orf80
ERV3-1-ZNF117
ERV3-1
ZNF737
SPTBN1
RPS11
FGF1
HEXIM1
CCDC146
SCNN1A
TARS3
INTS12
ID1
GSTCD
CDH6
FAM76B
CEP57
WTAP
SOD2
GJA1
SMARCB1
H4C9
FECH
PTCD2
MRPS27
ZNF576
IRGQ
RCOR1
MDK
MAT2B
TMEM143
SYNGR4
MEIG1
KANSL1L
IL1RAPL1
ZNF548
ERBB2
BTG1
SLX1B
SLX1A
BOLA2B
BOLA2
ZNF273
TBC1D31
TMEM220
LIFR
NARF
EHD4
SP5
ACTR3
MAD2L1BP
GTPBP2
CEP164
SLC25A25
KHDRBS1
SPPL2B
LSM7
TSPYL4
NEMF
MAST4
DSE
YWHAG
LRRC23
KHSRP
EIF3E
FNBP1L
SERPINB6
MAPK14
MAP3K9
EVI5L
UFSP2
USP53
RAPGEF5
COPS7A
TAL1
SALL4
KNL1
OGT
SCNM1
LYSMD1
VCP
SMC3
NODAL
TTI2
POU2F1
SRPRA
HDGFL2
CCDC174
SLC11A2
ZSCAN10
NOL4
ARMC3
ZCCHC14
PPP1R15A
RAP1A
DLL1
CDK6
PIP4P1
GPBP1
GNA12
FAM174A
ZNF101
SLC12A7
CSRNP3
CTH
ZNF687
TCIM
IL17RD
SLC4A2
CDK5
NF2
ACTR2
CTIF
DERA
NAIF1
EEF1AKNMT
RPUSD4
FGF19
FAM118B
OSGEP
NCLN
APEX1
EIF4E3
CHMP7
CDK5RAP2
DCSTAMP
ALPL
MEA1
SFT2D3
LY6G6D
H3C6
ARHGAP18
DMRTA2