ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3205373 | Head and neck squamous cell carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◣ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

MTF2
NRARP
IQCH
AAGAB
VANGL2
RCOR1
TRMT2A
RANBP1
CCDC88A
FZD1
INTS12
GSTCD
SLC33A1
NOTCH1
SNX16
WDR74
MLEC
WDFY2
GFM2
ADAM28
TNRC18
ATXN7L2
PTMA
ZBTB40
KDM3A
ARID2
TJP2
PEX3
ADAT2
POLB
GBA
NACC1
NDUFB5
MRPL47
WDR36
HEXIM1
IPO4
KLF7
CEP63
ANAPC13
ZFAND3
OGA
TUT1
MRPS14
CFAP20
STAU2
ZNF335
PGK1
ZSCAN2
PTCHD4
F11R
SYNCRIP
RASAL2
MTRNR2L8
HSPH1
PPDPF
RTRAF
ASF1A
TSC1
GFI1B
MRPL48
TMCC1
FAM168A
CCDC152
PIK3CA
ACOT1
HSPA4L
HMGB1
TUT7
USPL1
FAM227A
CBY1
CYTH2
ZNF195
HEBP2
ZNF37A
LGR6
MRPL44
H4C12
NDST1
FNBP1L
SECISBP2
FRA10AC1
GSN
LSG1
SSBP1
ARIH1
YLPM1
DDX17
MTRNR2L2
KMT2A
NOXA1
SLITRK3
FGF19
GABPB1
PAXBP1
BZW2
ANKRD65
ANKMY2
CAPRIN1
ZBTB6
CHD8
PTPRK
IL23A
FMNL3
OGT
CCDC200
MED23
ITGB1
JUP
KDM2A
ZNF440
ZNF426
MRPL3
AP4E1
LY6G6D
GOLM2
DKK1
CLPB
GRK6
ANXA11
SKIL
NREP
GBP6
UBTD2
CFL1
ANAPC15
PHF5A
ACO2
BMS1
ITPRIP
RMND1
ARMT1
PPP1R18
DKK3
DSTYK
C17orf75
EIF4A2
MSANTD4
WTAP
SOD2
INSM1
KMT5B
PGBD2
MRPL21
IGHMBP2
TMEM132A
TMPRSS4
FSCN1
STMN1
SPIN1
RAPGEF5
USP30
ADRM1
CHD6
PAFAH2
CLTC
POLR3E
SLC29A3
DUSP6
LMX1B
ESRP1
GPR137
PRKCI
DGLUCY
EDN1
SLCO1B3
H4C14
EIF3F
GALK2
COPS2
CEP41
ID1
RBBP5
AAR2
TMEM242
TMEM41A
EMC9
FIZ1
ZNF524
RPL27
H4C11
SLC25A45
TRAK2
STRADB
PPIP5K2
COX16
SUGCT
MPLKIP
MNAT1
TRDMT1
SPHK1
SINHCAF
B4GAT1
NCOA7
PTGES2
MUS81
MCCC1
ZNF106
STX16
TES
KNL1
CAV2
MRPS31
ALDH7A1
SHF
PHIP
NUF2
FBXL19
NFIX
COL17A1
POLG
ZNF791
ZNF490
NUP160
ADAR
SLC44A1
GPSM3
CSRNP2
NSUN6
ARL5B
ZNF408
ARHGAP1
SLC35A3
SPATA12
ZBED5
GAS1
NDUFS3
KBTBD4
TMEM101
YEATS2
NPIPB4
YWHAQ
MTDH
SRPRA
YDJC
ZSCAN9
TRMT1
GCDH
ABCA13
MARCKS
ZBTB8OS
RBBP4
HEXIM2
EXOC5
AP5M1
ATAD2
CACYBP
UBE2B
CDKL3
NFKB1
UBB
C15orf62
MRPL42
H4C15
SPRED1
NPIPB8
TEFM
GTF2H4
VTA1
NMBR
GTF3C5
PLPP2
RBM39
ARL2BP
ARMCX5-GPRASP2
ARMCX5
TBC1D13
PPP1CC
TBPL1
COMMD2
RTTN
MAPK6
NASP
LNX1
FAM220A
GTF2H2
EIF3E
TCF12
ZNF627
LTBP1
CHMP4B
SMUG1
DNTTIP2
C11orf49
MAP3K9
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NCBP2AS2
NCBP2
ANKRD40
C2orf42
DISP3
PIMREG
SMARCE1
SELENOH
ASXL1
MAPRE2
PRKDC
MCM4
NPIPB12
PSMB7
USE1
ANKRD22
CCT2
HMGN1
RTN4
UBE2F
LPP
PTX3
NTMT1
SRSF6
DRG2
NR6A1
SLC24A1
PHF21A
NPAS4
NDUFS5
WDPCP
MDH1
GTPBP3
ANO8
CALM2
PNRC1
ZBTB26
BCAR3
GTF2H2C
GTF2H2C_2
MEGF9
GLIPR1L2
KAT6A
STK35
PALD1
KLHL24
RCOR2
ALG10
FAM227B
DTWD1
ETV4
CLCF1
PAIP2
UFD1
CDC45
COPS7B
ZER1
TRUB2
RUVBL1
COQ4
EGFR
EXOSC2
SSBP2
PCNP
SFT2D2
ESRRA
SNAI2
H3-3B
RBL1
POR
PPP5D1
CALM3
LOC100129484
SMARCB1
SLC3A2
POLR2M
ACOT2
CCNL1
POLDIP3
CCNG2
C16orf46
GOLIM4
ZMPSTE24
RABGAP1L
CD55
WDR24
GARS1
BRF2
IFRD1
RAPGEFL1
FAM98B
HNRNPDL
ENOPH1
TSNAXIP1
RANBP10
NME1
TRIP4
PIH1D2
NKAPD1
CHST15
TMEM41B
NELFCD
DMAP1
ZNF391
OAZ2
UQCRQ
GDF9
AGO1
ARL14EP
AADAC
NPIPB5
RPS7
DLX5
GADD45GIP1
PSMD3
TCF7L2
SPRY4
EDARADD
MAP4K4
NHLRC2
LRRC37A3
DCLRE1A
PDIA4
AQR
FCHSD2
CREM
BRWD1
SYT1
HR
CDK5R1
KLF12
FOSB
HSPE1-MOB4
HSPE1
HSPD1
UBASH3B
PLEKHO1
NAB1
IQSEC3
ERAP2
ZDHHC5
TPR
ODR4
NFE2L2
RAD23A
NPIPB11
CTNNB1
CSTF2T
MEIG1
ALS2
ZNF443
ZNF326
GATA6
STK32C
LRRC27
IREB2
SLC35E2A
USP6NL
EIF1AD
BANF1
RAB18
MRPL16
USP14
PRMT5
ZNF76
KMT2B
GET3
ZNF561
FXR1
BACH2
PPIA
TMSB10
USP47
PDXDC1
NSFL1C
H4C9
EPC2
TTC32
SDK1
ATF4
FANCF
FAM83B
ZNF33A
TMEM68
TGS1
NR1H3
ANXA2
ACP2
SYAP1
GPR39
CDK12
PSMD14
ZBTB25
ZBTB1
C11orf95
HDAC9
RFFL
LTA4H
RBBP8NL
ZNF117
HBP1
YWHAZ
LRRC8A
KYAT1
CCDC88C
DSG3
CPNE2
BLOC1S5
SRSF7
ZNF292
SRSF3
IST1
RILPL1
METTL9
POC1B-GALNT4
POC1B
AP2B1
DPY19L4
ATAD5
IGF2BP2
TIA1
TINAGL1
ISY1-RAB43
ISY1
SMC2
FAM3C
ZFAT
DAPP1
GADD45G
C15orf40
CEP120
MTBP
MRPL13
ISL2
SFPQ
PCSK5
TOP3B
TMEM87A
GANC
ZNF518A
TMEM230
PEMT
ERLIN2
ZFC3H1
THAP2
CCNJ
C2CD5
PALMD
DUSP1
SPINT1
JMJD1C
FAM171A2
TRIM29
PHKA2
LRP6
PBLD
HNRNPH3
MRPL49
FAU
KSR1
EIF2D
SNX27
CDC42SE1
GFM1
CALR
SLC25A36
WASF1
CDC40
CLP1
VCPKMT
SOX2
ABHD16A
RAB14
ZC3H6
KRT80
WDR11
ALKBH3
POU2F1
SPRING1
RNFT2
TP53I3
ERCC6L2
RAD51AP1
C12orf4
TTC14
TSEN54
CASKIN2
PMEPA1
FAM83A
PSMF1
FETUB
CENPE
ZNF184
PSMD1
CHMP1B
TMEM249
OPA1
SNX8
EPB41L1
ABLIM1
MAN2C1
ZNF124
RASA2
TIMM22
RSRC1
HNRNPA1L2
LLGL1
COPS7A
MAPK8
MKRN2
YIPF2
TIMM29
FKBP5
HGS
ARL16
ZSCAN12
PHF14
C12orf57
PRPF18
PLEKHG4B
ADO
BAZ1B
PRDM10
SMG5
FOS
DPP3
EMC4
ANAPC5
KIAA1217
TEX9
RFX7
KIAA0895L
ICE1
FANCC
NR4A1
FURIN
ZNF24
FRAT1
NADK2
DET1
SAXO1
RRAGA
PRKCSH
CCDC151
ZFP36L1
RPS26
ZNF668
HNRNPAB
ZNF646
NUDCD1
GPR158
DEK
RMI1
HNRNPK
C18orf21
ZNF775
SIX2
DHX8
MRPS30
MCM7
AP4M1
ACOT7
HSPB3
NUP93
ITGB3BP
EFCAB7
ANKRD12
SLC9A1
PTEN
LRRC8B
KLLN
FUZ
CD2BP2
MAPK10
KHDRBS1
STAT3
PRDM2
NBPF1
PKM
BACH1
RCC1
HUS1
FEM1B
ARHGAP42
SIRT4
CORO2B
TANK
ELOVL5
CUEDC1
DHX36
RBM25
DNAJC25-GNG10
DNAJC25
KLF4
H3C3
HOXA9
MRPS23
MAF1
SCAND1
ATP5MC3
RGMA
PRADC1
CCT7
GOLGB1
TRIB1
GID4
ATPAF2
SCAF4
RPL5
SF3A3
SUGP1
MAU2
GABPB2
SECISBP2L
INPP4B
ZNF785
SS18
FRAT2
SLC20A2
MIDN
ZNF189
MRPL50
NCOA5
PRKG2
JRK
CALM1
TOR1A
RPS29
SF3B6
FAM228B
AURKAIP1
CASC3
BIRC3
G3BP2
ZFHX2
MPHOSPH10
MCEE
TXNDC9
SNRPD3
GUCD1
EIF5B
GSTA4
FANCM
ZNF799
RNF19A
GRHL2
TIAL1
DNM1L
KANSL1L
SMC3
TCTEX1D4
BTBD19
NME7
BLZF1
TADA1
ZDHHC6
VTI1A
MEF2A
LPCAT4
ZNF277
DOCK4
MRPL53
ARHGDIB
UBE2D1
RHEB
NIPBL
MTERF1
COP1
PDE4D
ERGIC2
PCBP2
SRP14
COPB1
ZMIZ2
ATG10
SLC39A3
H3-3A
EEF1A1
UBOX5
FASTKD5
NUDT3
RPS20
SCAMP5
ZSCAN30
VPS8
STAT6
COL4A6
COL4A5
BARHL1
SNAPC3
FOXP1
LMO4
ZNF675
MRPS15
RPS3A
U2SURP
NUDCD3
CTXN3
TRA2B
UBE2E3
CIPC
FZD7
ZSWIM4
GTF2IRD1
RNF121
PPEF1
PLEKHA2
LOC100133315
BNIP1
CNIH4
UTP23
UCHL5
RO60
KRT13
TMEM196
MTIF2
NUAK1
ABCD3
SUPT7L
SLC4A1AP
GOLGA3
FLI1
ARHGEF12
ETV1
SLC16A13
UBQLN4
LAMTOR2
CCND1
HSD17B12
KRIT1
ANKIB1
ANKRD50
PPP1R11
NOTCH2
COL5A2
PHLDA1
ADPRHL1
MAT2B
PFKM
GDF11
ZNF384
C8orf37
RWDD1
SENP1
TTC33
RAB6A
HABP2
FZD2
PARP2
QTRT2
CCDC191
SUMO2
ARRDC3
CTR9
ZNF706
ATAT1
NKIRAS1
RPL15
ZNF823
E2F3
ZFAND5
RMND5A
RPL7A
MED22
RNF103-CHMP3
ST3GAL2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PLEKHG1
TNFRSF21
HNRNPH1
HNRNPA0
TRERF1
YTHDF2
NDUFAF4
KLHL32
TUBGCP3
PUS10
POLR1D
PEX13
LNX2
CPPED1
CNTRL
BBS1
SAPCD2
EHD4
CBX1
C12orf73
THNSL1
CLCC1
RPS21
RPL12
PDSS1
NADSYN1
LRSAM1
AGR2
PIK3R3
GCNT2
SOX5
HACL1
BTD
SASS6
SLC35E2B
PPP2R5E
FOSL1
GSDMC
TTC21B
TOP1
VPS13B
SSR3
POLR3F
H2BC14
H2AC14
DZANK1
BRIX1
C2CD4D
CCNT1
ZC3HC1
UBE2I
POU2AF1
MARK1
MAIP1
F3
DHX33
CEP162
EEF1AKNMT
IL20
PDCD6
NDE1
KDM5C
TMED1
CCNC
ALG10B
LAMTOR1
ZBBX
MTHFD2L
MARF1
DSG2
ARHGAP32
GADD45A
SH3GL3
TCF4
CITED2
UFSP2
TRMO
SERPINI1
PDCD10
XPO6
CILK1
DUS1L
ARHGEF5
MOBP
KCTD1
ZNFX1
NUS1
ZBTB4
SEH1L
POLR2A
MECOM
STT3B
SOGA1
SDHAF3
PCIF1
MORF4L1
C2orf49
XPNPEP3
ST13
PPIL1
VAMP4
PIK3C2A
NFAT5
NCS1
HSF2
CAV1
KIFBP
NEBL
ETV6
PTCD2
MRPS27
METTL3
IER3
HELB
TMEM95
NOL8
CENPP
MTRR
FASTKD3
RHOBTB2
ZBTB2
TMEM123
H2BC11
H2AC11
ZNRF2
TTC4
GTF2A1
RC3H2
CGGBP1
C3orf38
SYNRG
RPL22L1
MRPL40
BRD3OS
KLHL20
NPIPB3
COQ3
HIRA
FAM8A1
RNF43
MAP3K7
H2BC13