ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

SACS
PIPOX
HMGB1
DNMBP
HDAC9
OBI1
OTX2
DNMT3B
METTL11B
ADAM28
REST
MTF2
FAM227A
CBY1
FBXO40
SLC7A5
PLPP2
GIMAP5
SFRP2
PHF5A
ACO2
SOX6
DAGLB
SRRM4
TNC
IFRD1
DHX32
FBP1
NANOG
LIN28B
PPP1R16B
LRRTM3
TUBB
PSMD9
HPD
ACVR1
FUZ
WDR74
CER1
GRK6
DDX17
PTMA
HESX1
TOMM40
FGFR2
ERBB2
PXMP4
RFX4
SNRPN
NADK
SLC2A14
SGMS2
C20orf96
ZNF304
NDUFB5
MRPL47
LRRTM4
ZNF608
TDGF1
CARHSP1
USP44
ADA2
HGS
ARL16
ALDH7A1
CD2BP2
IZUMO1
CDC14B
FAT1
ZNF428
NRARP
ZFC3H1
THAP2
RTBDN
PRICKLE1
NDUFS5
CELF3
TESK2
UFD1
CDC45
WFDC8
CCT2
CD200
TLX3
IER5L
KIFBP
WDR49
PDPN
FGD4
GET3
GPSM3
PYDC5
IFI16
GADD45G
GDF3
DST
NRG1
HOXB1
PIF1
FBXL19
BBS7
ANK2
CTNND2
MOBP
RAB30
HIP1R
FAM153B
TRIM22
YLPM1
BRINP2
ETV1
LLGL1
MMP10
SYAP1
ZNF195
CPVL
TMEM41B
RAD54B
FSBP
SDCCAG8
CEP170
ERMN
H3-3B
ETV4
RNF213
ETFB
QPRT
ZNF763
PES1
TCN2
KCNN2
AKIRIN1
ACCS
KMT2B
CELSR3
NFE2
CYTH2
ARHGAP42
MAP3K12
TBC1D16
BCL9
WDR33
IL23A
PMEPA1
SASH1
CCDC124
SLC16A13
SLC33A1
SMIM14
ESRP1
ESRRA
KCNIP4
KNTC1
GSN
ZSCAN2
RASAL2
TJP2
BORCS6
C1orf167
ARF4
PDCL
MOSPD3
RBM39
ZNF506
ARHGEF19
PLA2G3
ZNF474
PLCH1
EGR3
WDR36
ARMC3
AASDH
DPPA4
PAIP2
SMAD3
CCDC92
KDM2A
CNKSR3
ACTR1A
SUFU
SRSF7
TMCC1
ZNF101
ACSL1
ITPRIP
CDH10
FZD2
RIF1
CHD9
DGLUCY
YPEL3
BFSP1
NOTCH1
RPL27
GOLGB1
ST6GAL1
NDST1
RNF19A
SLC25A11
RNF167
GCNT2
ZNF202
PTGS1
GABARAP
PSME3IP1
RSPRY1
SPRY4
ARID2
CDON
TSGA10IP
ADAR
ARIH1
ZNF532
ETV6
COX8A
TRDMT1
AUH
PCDHB8
ZBTB45
UQCRQ
GDF9
LOC107986453
MCM10
PBXIP1
KDM3A
WASF1
CDC40
CAPRIN1
SCOC
SYT12
INTS9
HMBOX1
ST18
PDIA4
GSPT2
TTF2
SAXO1
RRAGA
ZNF35
RGS3
IFTAP
ZNF3
TES
RCAN3
MSANTD4
ESR1
ILF2
TIA1
SALL4
ALPL
N4BP2L2
DUSP12
TIAL1
MAP3K9
TRPM3
TTC39B
EIF4E3
SLC25A36
PWWP2A
MARCKS
CCDC167
SPHK2
ZNF180
SH3GL3
PIN4
MMACHC
SNX16
DHX8
TRIM38
RTKN
OR51H1
RSPH14
WBP1L
FOXP1
SYNPO2
AMOTL2
SFPQ
ATAT1
SHF
EMC9
ANAPC15
ZSCAN10
PCYT1B
TIMP4
VOPP1
FOXO6
CCN2
PKNOX2
ETFDH
C4orf46
VMP1
PTRH2
PTX3
BAZ2A
ZNF682
MYMX
GADD45A
SMARCAD1
DHRS3
ZNF254
WBP11
C12orf60
KDELR2
HELLS
NAT1
POLB
CCL2
IP6K2
CNN3
WNK3
MYO18A
TMEM33
PRKRIP1
SAPCD1
C1R
SLC25A18
DISP3
DDA1
PANK2
OGA
PTCD2
MRPS27
NEMF
ANP32B
VASH2
RND1
CALD1
USO1
WLS
ZNF737
ZCCHC14
TIMM17B
PQBP1
RERE
MCCC1
ZNF85
ZNF486
SELENOP
GGPS1
ARID4B
SNAPC3
TSNAXIP1
RANBP10
ERICH6B
HNRNPC
HNRNPUL1
DGKB
PACSIN3
HMGN1
EIF3F
CFAP20
LOC390877
GTF2F1
SHROOM3
CBR4
PUM1
FAM13A
RGSL1
CDK16
TMEM237
BTBD3
ZNF561
OSR2
PEX5L
CAMTA1
HSPA13
WTAP
SOD2
VCP
SLX4IP
DACT3
ERGIC2
POU2F1
SPEF1
KIAA0895L
EFCAB8
PAG1
FAM185A
RAB4B
AFF1
ZNF677
BAMBI
INSYN2B
BLOC1S4
CDHR3
TMUB2
ENOX2
CCNB1IP1
KATNAL2
ZNF627
ABLIM1
CCDC200
LCK
LIMCH1
MACROH2A1
PTPRZ1
PGAP2
TP53AIP1
ZNF43
DISP1
RGS12
FAM76B
CEP57
CCDC77
HNRNPDL
ENOPH1
LRRC23
REC8
OARD1
NFYA
OSGEP
APEX1
ACYP2
PSME4
PRRC2A
SIX2
ADNP
PER2
ZMAT2
PGAM1
PPME1
C2CD3
GTF2H4
ZBTB26
ZNF630
ZCCHC12
MRPS30
KXD1
GRIN3A
ZSCAN9
G3BP1
HEXIM2
TSPAN19
LRRIQ1
GDF5
CEP250
CEP164
SPAG9
CTTNBP2NL
CCDC130
SELENOF
HS2ST1
KLHL4
PELI1
ZNF589
FBXL8
VRTN
ISL2
XPC
LSM3
ZBED5
ZNF268
NONO
SPEG
PBLD
HNRNPH3
SUGP2
ARMC6
RNASE9
TFDP2
ATAD2
ZNF548
SHC1
CKS1B
ZNF775
SLCO5A1
H4C9
HIP1
PIAS2
UBA1
MED12
EMSY
SPAG4
DACH2
MUSK
LMBRD1
TCF20
ANKHD1-EIF4EBP3
ANKHD1
ITLN2
FLAD1
FRRS1L
PDE4B
GOLPH3L
EXOSC2
PEX11G
ZNF253
ESYT1
CDC7
DPP4
MS4A6E
KLHL5
APH1A
CLCN5
INKA2
ACSBG1
ARHGAP27
ZBTB40
BSDC1
SMARCA2
SYTL2
VPS37A
CNOT7
CHD6
HSPH1
ZSCAN31
ZCCHC8
CNP
MTUS1
INAVA
TPGS1
TCTEX1D4
BTBD19
LYRM7
NFIA
AHCYL2
RSF1
AAMDC
PACRGL
MIDN
ZBED3
IPO11
ZNF8
CEP41
FAM120B
ZNF469
PPP1R15A
SPART
DNAH2
ZBTB6
ZNF91
PPP1R12C
ELOVL5
SLC25A25
PSMB7
RBM22
MAP2K5
HNRNPL
BMPR2
MCTS1
ZIK1
THBS2
RABAC1
GJC1
COX7B
NUP62
IL4I1
ATF5
CDK5R1
PAXBP1
ALPK3
TSPAN14
PIK3R3
STRADA
GPR55
ZNF358
PCDHB13
GALNT8
CCDC146
EHD4
SORBS2
ZNF92
TPCN1
IQCD
CIAO2A
DNAJC12
ORAI3
GPC6
SLFN12
C11orf58
MAPK14
BCL11B
ZNF675
C1RL
FTL
IGBP1
JAG1
VEZT
FGD6
MAT2B
ZNF273
STK32C
LRRC27
SLC2A4
USP53
MRPL42
DUSP7
PCDHA11
EPHA2
ZNF611
OSBPL1A
NAIF1
RPA2
ILF3
ZNF285
DDX59
CLIC1
NARF
ZNF668
ZNF720
E2F7
RAB25
TBC1D31
TREX1
FAM72D
FAM72C
WDFY2
CSRNP2
DPP3
ZSWIM4
PIP4P1
MGST1
SPATA12
FKBP3
HES5
ZBTB8OS
RBBP4
CDK12
CHD8
ADGRA1
SPPL2B
LSM7
REEP6
PCSK4
NSUN3
DHFR2
FAM3A
OIP5
NUSAP1
VIPAS39
AHSA1
NPDC1
HS6ST2
LOC102723996
ICOSLG
SELENBP1
AKR1A1
OLFML3
YIPF3
POLR1C
CLPB
DPPA2
PTGFRN
TCAIM
RBM23
ZNF681
PRRX1
PRMT1
PNN
CLEC3A
GRHL2
CRISPLD1
GFM2
CCDC171
PHOX2B
NUP160
ADRM1
SLCO4C1
SPTBN1
TENM2
PALLD
DELE1
PRRC2B
CCNG2
PTPN12
CCDC152
IQCH
AAGAB
KLF17
TCF4
G3BP2
GBA
PCBP2
H3C1
SDHD
ZNF493
L3MBTL4
TUT1
KLHL24
YWHAG
PLTP
TXLNG
PRKRA
PJVK
SP2
CLDN4
TRMT2A
RANBP1
EEF1A1
NCLN
ACTL6B
COPS3
IFRD2
CMSS1
PDE1A
INPP5K
PSKH1
C7orf65
DDX3X
NDUFB4
RABL3
GTF2E1
RPS6KA2
NFKBIL1
ATP6V1G2
PLEKHG1
SP5
ZNF66
SERPINH1
ADAMTSL1
TENT5B
RBBP9
CSRNP3
NRL
DCAF11
AP1S1
WNT5B
RABGAP1L
NSMCE4A
TOM1L2
DRC3
SERPINB3
DPAGT1
NASP
ADD2
CSNK1A1
ZNF343
UBQLN4
LAMTOR2
TBC1D10B
MYLPF
EPHB6
ANKRD28
MED17
NR2E1
PAX6
CLCF1
OLIG3
PNRC1
LOC389199
AFAP1
NGDN
FAM220A
FAM221A
TNNT1
HACL1
BTD
TBC1D17
AKT1S1
BAG6
APOM
C1orf100
ATF6B
EPB41L1
RBBP6
PRTFDC1
APC2
PSMB6
ZMAT1
AMACR
NUDCD2
HMMR
UBXN4
TMX2
MED19
KNL1
FEM1A
GALM
ARSD
H2AX
MTMR4
WDR86
CAPNS1
DNM2
HDGFL2
NF2
SP1
MPND
ZNF724
TMX4
TMBIM6
PHF12
TRIOBP
ATOH1
SLC39A9
ERH
TMPRSS3
LRRC34
IL1A
CLIC6
PPP1R18
DYRK1B
GDPD2
ZFP64
FXR1
TLCD3B
TSNAX
ARID5A
KHSRP
MEX3B
WDTC1
POLR3E
SET
FRMD4A
TPP2
NR2F1
STOX2
TTI2
RNF26
ELP5
CTDNEP1
DCLK1
COPS7A
ATF7IP
CABYR
TMEM91
B9D2
TM9SF4
EP300
NDUFA2
IK
ZNF714
EMC4
GSK3A
JADE1
PACS2
KCNN3
ZNF738
DPYSL2
AMOT
TP53BP1
KAT7
CHN2
RRBP1
SLX1B
SLX1A
BOLA2B
BOLA2
INTS4
CCDC30
TAS2R7
TRIM54
GBF1
GATB
GLIPR1L2
SUMO2
PAX9
RFFL
XAB2
MDK
DMD
RPS6KB2
HAGH
FAHD1
NUDT2
KIF24
UBALD2
CDX4
TMCC2
HYI
TMEM190
SEC63
SENP8
MYO9A
HBP1
ERV3-1-ZNF117
ERV3-1
ARL14EP
ZBTB11
ZNF100
CENPV
GCSAML
MEF2C
LCOR
UQCRC1
FGF19
SALL2
TNRC6B
UBOX5
FASTKD5
ZNF433
VPS52
RPS18
PAIP1
TNFRSF21
TMEM143
SYNGR4
CACYBP
FXR2
NDUFA5
METTL9
SHBG
SCGB1C2
SCGB1C1
H4C14
CD300LB
UBR2
RND3
FEZ2
LTBP4
ZNF106
LMO4
GRAMD2B
MAPK10
EIF3E
POC1A
AKIRIN2
RFPL3
KIAA0319
AFF3
STAG3
GPC2
ABHD2
FBXO16
PAFAH2
TNNT2
POLR3A
C1orf94
SIRT4
UQCRC2
FH
ACAA1
SRA1
TMF1
C1GALT1
MTHFR
CLK4
FABP7
CALCRL
H4C3
RDH11
DUS3L
HMG20B
SLC13A4
VENTX
NKAIN4
OXA1L
WDPCP
MDH1
S100A4
HSP90B1
ABCF2-H2BE1
ABCF2
EVI5
TRAPPC6A
BLOC1S3
SNX15
ZNF586
RBAK-RBAKDN
RBAK
DKKL1
H2BC5
PCDHA10
NPIPA5
NEDD9
IGFBP2
ING4
FNDC11
MAGED1
WDR89
ANKRD36B
KRTAP13-3
ALDH1A3
SLC7A11
GCDH
EXOSC5
BCKDHA
PHLDB2
SMUG1
WRAP53
TP53
KBTBD6
AP2S1
ZNF587B
PDE9A
KCNA1
ZNF292
NKIRAS1
ACTR3
CCDC174
WBP1
RPL15
PAK2
FLYWCH2
GAL3ST4
SLC39A14
RAD21
GABRG2
ZNF277
DOCK4
PRCC
ANK3
ZNF430
RBMS2
H2AC16
PI4K2A
ZNF576
IRGQ
RNF5
AGPAT1