ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047416 | hESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◣ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

BFSP1
DICER1
SACS
OSBPL1A
PDPN
WFDC8
CAMTA1
FAM181A
C1orf127
PRR5L
METTL11B
DTNA
GFRA1
CTNND2
DNMT3B
PRM3
LIMCH1
CHN2
PKNOX2
PCYT1B
ITPRIP
ABAT
ZBTB18
ACVR1
PTGS1
RGS12
AKAP9
HMGB1
TNC
HDAC9
NUP214
PDE4B
BPNT2
TMPRSS7
ARHGEF37
MTF2
MMRN1
DNMBP
PLEKHG1
LRRTM3
KIF21A
GAS2L3
PTPRD
DGLUCY
TCF20
NDUFS5
ETFB
ZNF593
C1orf232
PPP1R16B
PIPOX
TFDP2
TRDMT1
PRTFDC1
LCOR
MAP2
EMID1
ZNF474
CLIP1
CHD7
KCTD6
TMEM114
PALM2AKAP2
GPSM3
NEDD9
RFX4
LYSMD3
CX3CL1
GXYLT2
AGMO
RRAGD
SASH1
BTBD3
CRISPLD1
FGD4
DHX32
NRCAM
PREX2
ARHGAP24
TAGLN3
CNN3
DLG2
IPO11
SLAIN1
WDR49
SLC10A2
CENPA
CLIC1
SPEM1
PES1
TCN2
TMCC1
APBA2
FAM102A
ZFC3H1
THAP2
GPM6B
SENP8
MYO9A
ADA2
ETFDH
C4orf46
FAM227A
CBY1
MTUS1
PACRGL
CELF2
ZNF254
CPA5
VXN
GRK6
TMPRSS5
ERICH6B
APPL2
FECH
SYAP1
ANKRD6
SLC6A9
ALDH7A1
ZBTB20
PDE4D
ZHX3
WBP1L
LRIG3
ZNF304
GSN
MAP1B
C1orf189
MEF2C
SRSF7
NUFIP2
TMEM41B
DLL1
MOSPD3
EPB41L1
PTH2R
UFD1
CDC45
C2orf80
NDUFB5
MRPL47
KCNN3
PHF5A
ACO2
GADD45G
SAXO1
RRAGA
KDM3A
PTPRZ1
CCN2
ETV4
BTBD17
HLTF
CEP41
SAPCD1
LLGL1
SPATA22
NFASC
FRRS1L
MKRN3
BMPR1B
SDCCAG8
CEP170
EGR3
BCAT1
GAS8
DBNDD1
DACT3
FIGN
FZD2
VMP1
PTRH2
ACSS1
TUB
TSPAN19
LRRIQ1
NR2F1
C20orf96
TOMM40
YIPF3
POLR1C
COA8
BAG5
MMP10
BEND3
DOCK9
CTNNA2
LRRTM1
RGS3
CLEC18B
FOXP1
CLEC18A
ARIH1
RORA
ZNF195
FUZ
ABCB4
PCDH8
CDH17
KDM2A
GET3
ZSCAN2
ABCA5
WDR74
CD2BP2
DPP4
NKAIN4
PIK3R3
CCT2
ZSCAN18
GAA
RAI14
MAP2K5
TUBB
DDX17
AASDH
CARHSP1
H3-3B
DCT
CELF3
ARHGEF26
RNF19A
PANK2
PHYHIPL
RSPH14
CDK6
PMEPA1
SERINC2
HIP1R
ZCCHC8
NIN
MBP
CAPRIN1
IFIT3
GRHL2
DMBX1
ABCA1
TRIM2
VASH2
CHD9
CLEC18C
DMD
RNF43
PLAGL1
MAPK10
MID1
ADPGK
ZFYVE1
ITGB8
NNMT
GDPD2
RAB30
ERMN
ACTR3
HACL1
BTD
SLC16A13
JAG1
RHOJ
APC2
CTTNBP2NL
OR6C3
AKAP6
VCAN
MAST4
ZNF292
STK32C
LRRC27
ZSCAN9
SHF
FRMD4A
ZCWPW1
MEPCE
MALRD1
TKTL1
ZNF428
DHRS3
EMSY
PTMA
DYRK1B
DOP1B
SLC25A11
RNF167
HSPH1
ARF4
PRKRIP1
LIX1
C12orf71
NCKAP5
TNFRSF21
ITPRID1
SLC7A5
LAMA4
SALL2
ARID2
ZBED4
HES5
ZBTB26
SFRP2
SMARCAD1
INPP5F
CELSR3
ADGRL2
NAT16
THAP11
ADAR
GADD45A
HGS
ARL16
CSRNP3
TESK2
PLCH1
WDFY2
DDX5
CEP95
FAM174A
ARHGAP18
APOLD1
CDK12
CRIP2
SIX2
VWA5B1
PTCH1
PMFBP1
SLC33A1
CLCN5
KIFBP
ENPP2
DGKB
CHMP7
PBXIP1
MTCH2
CST2
TREX1
SMC3
TPCN1
IQCD
FABP7
NDST1
TUT1
SPHK1
RBBP6
IFTAP
ZNF358
KIF2C
PALLD
PYDC5
IFI16
VEZT
FGD6
BCL9
ADNP
PWWP2A
CDH2
ISCA1
ZNF709
UQCRQ
GDF9
USP44
ST7
SPRY4
CLASP2
REST
BBS7
ZNF737
TFEC
CNTN6
ZNF608
PPME1
C2CD3
PRMT8
BSDC1
NREP
RUBCNL
SPDYA
STOML3
PELI1
REM2
SNAPC3
RIMBP2
PTPRE
ANK2
UBQLN4
LAMTOR2
CDK16
YPEL3
UFSP2
ATN1
BSX
TMX4
LANCL2
ETV1
SLC7A11
CCDC174
FOXO6
CCDC167
MCM10
FRAS1
CALD1
CIAO2A
UBAP2
ZSCAN31
ATF7IP
BRINP3
ITPK1
SYBU
NCALD
PPP1R18
CFAP20
RAPGEF5
SHROOM2
ERGIC2
TNIP3
ARL14EPL
CCDC171
JAM2
CRB1
ANK3
MRPS2
C9orf116
ESRRG
HSPA13
ZBTB38
ABLIM1
HACD4
CYTH2
BORCS6
SH3PXD2A
PACSIN2
A2M
MUSTN1
FAM204A
BCL11B
TRMT44
ACOX3
PKD1L2
MSANTD4
ZNF627
RBPJ
SOX6
WBP11
C12orf60
NF2
TEPP
CALCRL
WRAP53
TP53
ZNRF3
ZNF548
FMN2
ZNF180
INSM1
ENOX2
TMEM143
SYNGR4
GLIPR1
TOP2B
NCLN
KNTC1
CCDC130
ZNF763
CORO2B
SPHK2
LNX1
PEX11G
KLHDC8A
SFPQ
SPPL2B
LSM7
LTBP1
MCCC1
MOB1B
KHDRBS1
GABARAP
PLXNB2
WLS
RFFL
ZNF561
CHD6
SLC25A36
MYO18A
C1orf194
CELF1
DHX30
SPATA13
INAFM1
VCP
DST
TMUB2
NUP160
ZNF91
RNF5
AGPAT1
RASAL2
TTC21B
CCDC66
DISP3
SLC22A23
ZBTB40
APC
MRPS30
PPP1R32
TCF4
ZNF43
NLGN3
LRRC43
ATAT1
CFL1
CTNNA1
LRRTM2
SPAG9
RAMP1
OARD1
NFYA
BLOC1S4
GLIS3
TIMP4
PSMB7
GOLPH3L
POLDIP3
ZIK1
SNRPC
SERPINH1
ZNF106
PDIA4
C17orf77
SOX5
OXA1L
NSUN6
ARL5B
CCNJ
C16orf46
GPBP1
DHX8
WDR33
TCIM
YWHAG
NOVA1
NDST4
EGF
SNRPN
KMT2B
CNKSR3
PNRC1
ZNF24
HPCAL1
ETV6
DPP3
NHSL1
CFAP100
EXOSC5
BCKDHA
SLC4A2
CDK5
FBXL19
ADRM1
TNRC18
NEMF
TBCEL-TECTA
TBCEL
PIN4
SLCO5A1
RNF213
YWHAQ
DAB2IP
ACSL1
PAIP2
SLC17A6
WASF1
CDC40
SCOC
NOL4
KDM1A
ZCCHC12
XAB2
ZNF197
USO1
NSMCE4A
NFIA
TIAL1
KLHL36
ZDHHC5
CCDC169-SOHLH2
CCDC169
NGDN
FSD1L
HS3ST3B1
PTPDC1
SRRM4
POLB
ZNF720
TRIM28
ZFHX2
AGTPBP1
RAD54B
FSBP
ZNF814
GRM3
HBP1
RBMX
PAXBP1
NTMT1
ACTR1A
SUFU
SPATA7
TNRC6A
PROSER1
NHLRC3
TBC1D1
TBC1D16
PTCD2
MRPS27
H4C3
ACOT6
MICAL2
CEP63
ANAPC13
ZNF285
ZNF253
ANP32E
RNF44
SLC17A8
MGRN1
GBA
CDH10
LGALS3BP
ZNF273
NDUFB4
TNRC6B
C12orf73
AKIRIN1
HEXIM2
TOR2A
CRYBA1
ANAPC15
MMACHC
HNRNPDL
ENOPH1
TBC1D10B
MYLPF
PTGFRN
FANCC
CITED2
HHIPL1
CCDC85C
XPC
LSM3
OSGEP
APEX1
N4BP2L2
OXNAD1
DPH3
TRAF3IP2
CSNK1A1L
ARSL
ZNF724
SCHIP1
ANKUB1
INAVA
SALL4
EPHA2
B4GAT1
PRR7
SENP3
IGFBP2
CHD8
CSNK1A1
CPEB2
LYPD1
DDA1
NEK2
FAM118A
SUGP2
ARMC6
DHX16
PSME3IP1
RSPRY1
DMWD
BRCA1
PNKD
PBX3
SH3GL3
WDR36
TMBIM6
TRAK2
STRADB
IKZF4
ANGPTL1
GDF5
CEP250
BAZ2A
PIP4P1
ZNF286A
ELOVL5
FBXW7
RTBDN
RFX1
RAB4B
DPYSL2
HK1
ATP2A2
NFYC
ATG2A
TMEM9
HSP90B1
RPL27
G3BP1
PIF1
FBXO16
ZNF85
OR2F1
FNBP4
DNM2
SPTBN1
EXOSC2
PRKRA
PJVK
ZNF48
RIPOR3
MAPK14
ZCCHC14
DCLRE1C
DISP1
CALHM5
TMX2
MED19
CCDC146
TIAM2
GRAMD1B
FOXP2
DAGLB
RBBP9
ZBED3
SLC2A4
H4C9
IFRD1
RABGAP1L
ZNF668
SEMA5B
PRDM12
GALM
NADK
AUH
KIAA0895L
ILF2
RLF
GYPC
KAZN
SPART
SMARCB1
COX7C
YLPM1
TSNAXIP1
RANBP10
UQCRC1
ZBTB6
PC
TCAIM
TLE3
CCDC102B
SMIM14
NDUFA5
RCAN1
KLHL25
CDC5L
PRKAG2
NRARP
ZBTB8OS
RBBP4
GDPD4
TTF2
SOGA3
MCM7
AP4M1
USP30
ZNF35
THSD7A
TRMT2A
RANBP1
LRRC23
CBR4
MAGI1
CLCN3
IPO4
TNXB
TMEM33
PRMT1
ST18
FAM76B
CEP57
RPS6KB2
ZNF430
TAF1A
DPEP1
TBC1D31
VPS37A
CNOT7
JOSD2
MALL
NOTCH1
INTS9
HMBOX1
RGS5
SASS6
TIGD3
SEMA3C
EXOC5
AP5M1
PITPNM2
TLX3
SPEF1
H2AX
GPR176
FEZ1
KLHL24
PUM1
TMEM187
OGA
TTC21A
GORASP1
ZNF587B
MAT2B
PSMB6
ANKS1B
ZNF576
IRGQ
TAX1BP3
EMC6
EIF4G2
GJA1
SRPRA
AP1S1
PTPRQ
LRTM1
CDC25B
HILPDA
ZIC5
RPL24
NEBL
MYO1B
TPGS1
SKIDA1
ACTA2
ITGB1
FAM168A
KCNH8
TRIM45
HDGFL2
GHITM
ARRDC3
LRGUK
ZMAT2
SMPD1
EP300
L3MBTL2
HNRNPUL1
YDJC
MAP3K13
ZNF506
NRG1
CSRNP2
H3C6
TENT5C
MICAL3
GRIP1
TXLNG
NFKB1
DTD2
ARID5A
FBXL8
HNRNPC
ZNF250
GBF1
BAG6
APOM
H2AC20
H2BC21
IGBP1
METTL16
DCUN1D4
NFATC2IP
COPS3
PNN
NFATC4
BDNF
ZNF8
NBAS
TUBE1
FAM229B
TTI2
NUP93
FAM110A
SPOP
G3BP2
USP14
PXMP4
ZNF3
RTKN
LFNG
NELFA
CLPB
STRADA
RAPGEF2
KNL1
USH2A
LSAMP
SMAD3
LOC389199
AFAP1
RGMB
DNAJC12
FAM104B
NONO
SCAF11
ZNF493
AGR3
NDUFS8
SLC39A10
ZNF697
SPAG4
WTAP
SOD2
H2BC8
H2AC8
DNAH6
DNAL1
PSMD3
SIRT4
CDC25A
TMSB4X
ELAVL2
PIH1D1
TBPL1
C9orf72
ZFAND3
SAPCD2
SELENOF
HS2ST1
PRPF19
MXI1
HDAC2
LIN28B
SYTL2
AMOTL2
STAU1
TENM2
DDX27
PDHA1
CAP2
PPP1R15A
DAD1
C1GALT1
MARCKS
KDELR2
ZNF714
H2AC15
H2BC15
CAVIN2
KLHL14
NFIB
PLTP
BANP
GFM2
SMARCA2
PTX3
IFI6
PCCA
COX7B
C16orf82
HMGN1
ZNF143
SSR4
IDH3G
DNAJC16
USP37
CNOT9
NSUN3
DHFR2
LSM10
ZBTB5
FKBP7
TET3
ZNF536
GGPS1
ARID4B
PLXNB1
DAZAP1
TRIM22
SNX27
GNA12
DMRTA2
MTAP
GOLGB1
SDHD
SRRM1
ZNF486
PPFIBP2
CNTN1
ESRRA
TBRG4