ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX553665 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◣ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
KCNJ15
FRG2C
FRG2
THEM4
ZNF512B
SULT1C3
LMLN2
ANP32D
CFHR4
TLR2
SNCG
MMRN2
COL23A1
APOBEC3B
SUPT6H
SDF2
ZNF117
C1GALT1C1L
MAD1L1
PIN4
RBPJ
IRAK2
PPP1R3B
CALCB
SNX16
REM1
DEFB124
C16orf54
FAM209A
SARS2
MRPS12
COLEC11
GORASP2
BAAT
C2CD4C
CYP4F11
CADM2
NFE2L3
LEP
MBOAT4
CNOT3
DUX4
DBNDD2
PRDX3
BCAR3
DUSP16
OR6J1
ATP9B
SMCO1
CASP10
VN1R4
TMX2
MED19
CTAG1B
CTAG1A
DGKQ
LSS
ENPP1
CLDN4
MUC3A
CYP17A1
GPD1L
KRTAP5-2
MRAP2
ZNF761
GCNT1
UBE4B
ZNF566
FGD3
SATB1
INPP5F
H4C11
H4C12
GSTM1
TULP4
ACSM2B
PRSS38
IQCF2
CCDC149
OR8B3
SEM1
C2orf88
PNPLA7
SIVA1
MON2
RPL11
SLC38A9
BCR
CYP4X1
RFC1
EXTL2
SMIM31
RAB6D
ANXA3
B4GALNT2
TFPI
TMEM44
RMDN2
GSTM5
SRPRB
TXNRD2
ADCY10
EML2
H1-7
ACSM2A
FEM1C
PDCD7
MPHOSPH8
SLC2A7
OR4K17
GTF2A1L
LRIG2
ZNF324B
MRTFA
SCCPDH
OR1E3
ZNF577
OR2AP1
OMP
PSEN1
FASTKD1
TMEM202
BCKDK
ACAA2
NARF
CYBC1
SLC2A11
RTP3
ZNF280D
OR1J4
ADAMDEC1
TNFRSF6B
FAM184A
RTCA
ZNF677
VN1R2
VCX3B
DLAT
ARRDC2
SLC35G5
PIK3R1
TMEM62
TBC1D5
STK19
DXO
HNRNPL
PIGZ
PUS1
PHB
SLCO1B3
MUC1
CCDC83
ZNF562
ZNF792
PSPC1
LBR
THOC5
HYOU1
OR7C2
DCTN4
PPP2R5A
ZNF30
AMDHD1
PLSCR4
ABCC10
TMEM68
TGS1
ERBB3
THOC2
PRKAG2
CELF2
SEL1L
ZNF329
DDC
CAT
TAAR9
CCDC38
LMBR1L
TMBIM4
PDIA2
SDR42E1
NUDT3
ADI1
KRTAP12-2
GLT6D1
KRTAP10-8
ZFP42
CCDC200
CEACAM21
STK32C
MRPS36
HLA-F
APOL4
SEC63
CTNND2
AADACL4
CCNY
CTAGE9
GOLGA6L7
POLH
XPO5
CLEC12A
KLHL41
SLC27A5
EHD2
PTGES2
LIPA
GTF3C2
CTAGE8
CTAGE4
ERICH3
IL34
LRTM2
MTRNR2L1
TMPRSS7
NRBP2
GASK1A
SLC35G4
CD14
GINS1
DCTN6
IL1RL1
RNASET2
FBXO31
TTC5
CD248
SLC25A18
WWTR1
KRTAP10-4
IGFALS
COX8C
PRAME
MSRA
BDH1
SH2D4B
RNASE10
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ST20-MTHFS
FABP6
KLRD1
PDE11A
FBXL12
SYN3
TRIM69
SRSF7
USP17L20
USP17L22
CASP4
LCN8
KIF2C
C1QA
BRMS1L
CDC14C
SPAAR
IL36RN
IL36B
IAH1
DNAH6
C3orf14
NANOGP8
SPRR2F
PLGRKT
ZNF557
CYB5A
CPA1
ZNF426
ZNF114
ZNF556
PHC2
PRPF8
SULT1B1
HYAL1
RTL6
RABL6
PRIM2
PTPDC1
UGT1A3
EIF4E
TTYH3
SH3BP5L
PFKFB3
C5orf34
EIF4EBP2
EFCAB10
LCE3A
LCE3B
PPEF2
GALNT1
OAZ3
PDRG1
COL26A1
TBCK
AIMP1
CLEC4E
KRT82
TEX19
PTPN12
NSUN7
CFAP73
LGR5
CD200R1L
HSD17B4
MS4A1
SLC35G3
TUBAL3
TEDDM1
CDYL
RAB29
YJU2
PRSS41
ZNF485
ASPSCR1
GAS2L3
TM4SF1
MEST
SERHL2
BANP
PPARD
VCX
VCX3A
ZNF582
SPARCL1
CLK4
SLC41A3
MKRN3
C9orf72
PRKAA1
USP17L18
USP17L11
USP17L21
USP17L12
TTC38
PKDREJ
CYP1A1
FANCI
ARHGAP40
OTUD7A
CLDN16
ART1
CHODL
LRRC74A
MPI
MAPK11
TMOD1
FANK1
USP17L15
OR1D2
MS4A13
KMT2A
TAS2R4
CATSPER2
CRYBB2
TACR3
SLC25A48
ZMYM5
ZNF550
ACOX3
TRMT44
SGCE
PEG10
ZNF584
ADAM20
CYP2C8
IQGAP2
SERPINF2
TNFRSF21
MUC2
MRPL11
PRAMEF33
PRAMEF10
SLC22A1
RCHY1
NAT8
RDH16
ZNF623
PDGFRL
TLR1
CRY2
HSD17B6
ABHD3
CCS
CCDC87
ENOSF1
NEUROG3
ARHGAP39
YWHAB
HGC6.3
UGDH
CLTB
ANK3
IFI44
SCGB1C2
SCGB1C1
ZNF699
SET
CT45A10
CD47
LGR6
ELAPOR2
FAM240C
TUBA8
C18orf63
HEATR4
C19orf18
ZNF398
ZNF425
GCNT3
YY1AP1
DAP3
RANBP9
BTNL10
ZNF572
TAS2R13
GCSAML
AHCY
GPR50
SLC45A4
DNAJB13
LLPH
NPFFR2
METTL16
PTCHD3
OPRL1
LKAAEAR1
TACC2
GLO1
ZNF841
MATK
NME2
AKR1D1
CRY1
FAM25E
COL18A1
CDC16
GINS3
UBLCP1
PDE1A
REN
AUH
KRTAP5-3
NNT
ZNF317
PGK1
OR5L1
TSPY8
TSPY4
TSPY3
TSPY1
TSPY10
CT45A7
CT45A6
CT45A3
SLC6A8
PNCK
VCX2
MAMDC2
BSDC1
YPEL3
ITGB3BP
EFCAB7
UBE2F
KRBA1
TMEM89
WDR74
TATDN2
MTRNR2L8
RABGAP1
APOA1
TBX6
DEGS2
MTRNR2L2
MSH3
DHFR
TMEM229B
NUF2
RBBP5
MTF2
RAB37
SLC1A7
CBX1
YWHAQ
FAM227B
DTWD1
MAPRE2
GBA
RABGAP1L
RPS7
DMAP1
ZFP30
AURKAIP1
GPRC5C
SAMD4B
DUSP6
SF3A3
ACYP2
SSBP1
COX16
RBM33
TARS2
JMJD1C
TBC1D19
PAXBP1
SELENOH
DCP1A
SUMO3
RPS29
CCDC130
PRRT1B
COMMD2
MED23
TRIP4
PEX3
ADAT2
FRA10AC1
TMEM242
MMACHC
FAAH
RPL27
HTR5A
RBBP9
TTC32
DSTYK
NPAS4
CEP85
SUPT7L
SLC4A1AP
TATDN3
NSL1
LUC7L2
FMC1-LUC7L2
FMC1
ACTL8
SLC24A1
TTLL12
ZMPSTE24
CALD1
ZSCAN31
NDUFS7
DNAJC25-GNG10
DNAJC25
TMEM14C
NME1
SLC33A1
EIF2D
INTS12
GSTCD
CANT1
TACO1
TEX50
ZNF32
KDM3A
STX18
TEFM
NOS3
RPL37
REEP3
MNAT1
CALCRL
LSG1
LARP1
POLR3B
STX16
RPS14
DRG2
SKP2
LMBRD2
ZNF829
ZNF568
GTF3C3
HMGB1
TMEM41A
GTF2H4
ALG10B
DNAJB12
METTL25
CCDC59
NEMF
TDP2
ACOT13
STC1
UTP3
PPIP5K2
NOTCH2NLC
PDE4DIP
DHRS2
DCAF10
GTF2H2
INTS5
PAFAH2
SAR1B
MOB4
ST6GALNAC6
KDM1A
WDR11
MTR
ZNFX1
SEC22B
RTTN
ATP5MC2
TOP3B
VTA1
NMBR
NOTCH2NLB
NOTCH2NLA
USPL1
MROH7
REXO4
ADAMTS13
DEK
POLE4
DPY19L4
DISP1
GABPB2
TRMT5
SLC38A6
MAIP1
RAD54L2
KANSL3
FER1L5
STAT3
SLC25A51
RERE
NME4
TFPT
PRPF31
IPO4
TEX46
ATF7IP2
MTERF4
PUM1
ILF2
TOR1AIP2
TOR1AIP1
WDR36
ATF7IP
TTC26
ESR2
EIF3F
NCOA7
MRPL44
ENG
SAMD4A
NDUFB3
FAM126B
ZNF408
ARHGAP1
POLR2J3
SLC44A1
TIGD2
SLTM
MRPL30
MITD1
MRPS31
RAB30
GTF2H2C_2
GTF2H2C
EPRS1
CDK5RAP1
CCDC97
INO80C
NR1H3
ACP2
CEP72
HERPUD2
TTI2
PPP6R1
MRPL40
HIRA
CFAP298-TCP10L
CFAP298
ZNF391
MRPL21
IGHMBP2
MTIF2
TMEM43
CHCHD4
MRPS18C
HELQ
PSMF1
COX7A2
H4C8
PMF1-BGLAP
PMF1
OPA1
BNIP1
S100A9
POLR2J2
NUP54
IL36A
SNAP47
JMJD4
BAIAP2
RGPD2
RGPD1
CCDC150
RCAN1
NSFL1C
SNRPB
CCNC
TBL1X
PPIG
NUDT9
PARP15
IL21R
IQSEC3
MRPL48
RNF217
ADNP
TMEM79
SMG5
GFM2
C8orf37
GLIPR1L2
C18orf21
COPS7B
SMG8
BMS1
ATR
USP30
NBPF1
IFT88
PES1
PDCD6IP
LRRC61
XKR7
BRF2
ANK1
MRPL1
ZNF554
MTOR
RNF187
SNIP1
DNALI1
GALK2
ZNF292
ATP1A1
C1orf167
CATIP
KLHL20
AKAP10
AARS2
ALKBH3
GSTA4
TSFM
ZNF772
TTLL1
FGF1
FRG1
MRPS23
ZNF134
EIF1AD
BANF1
ZNF383
FAM133B
N4BP2L2
HACL1
BTD
ZSCAN25
TTC23L
TRUB2
EPB41
COQ4
ZNF165
MTBP
MRPL13
GTF3C5
SCMH1
PLEKHM3
SF3B6
FAM228B
CDC73
COPS4
FAM160B1
DUS1L
SLC35A3
RUVBL1
TUT1
GTPBP3
ANO8
DDX18
SCNM1
LYSMD1
SDHAF3
ARID1A
TMED1
LSM5
ZSCAN22
CENPV
CCDC88A
SMU1
DHX16
TGFBR2
FAM98B
ZSCAN30
C10orf88
TPK1
LRP6
COA6
TMEM222
VPS13B
TRIM48
NECAP2
RPL5
CLTC
ZNF385A
SNX17
EIF2B4
RBM45
CLUL1
CEP85L
GPAM
RMND1
ARMT1
NOP16
HIGD2A
AVL9
HIP1
SCAND1
LOC102724265
CPPED1
SMARCD2
ISY1-RAB43
ISY1
C17orf75
WDR55
EIF3E
PUS10
PEX13
AFAP1L1
FBXO38
R3HCC1
PIH1D2
NKAPD1
TMEM101
PDE7B
SUGCT
MPLKIP
DPP9
COPS2
HSPE1-MOB4
HSPE1
HSPD1
ALG10
SNRPD1
TMA16
ATG4C
METAP1D
MACC1
DHTKD1
MRPS14
SEC13
ALG14
FGFBP3
RPS15
GRPEL2
ZNF670
DRAP1
C11orf68
SREK1IP1
CWC27
CBWD5
TTC4
ARID3B
CCNI
HEATR1
CBWD3
CCSER2
HAX1
PTDSS2
SMG7
ACTR3C
POLDIP3
SMIM13
CCR6
AQP10
ZNF501
RNF125
ANO9
NUP107
SRRM3
PDE6D
CHD1L
PRPF18
RNF6
PHIP
DNAJC24
DCDC1
MMEL1
POLR3E
EEA1
NBN
METTL9
TPM3
CEP120
ZBTB45
CLASP2
RPS3A
GNAL
SNRPB2
ZMYND8
SLC35E2A
HUS1
PRKAR1A
MAN2C1
WBP1
INO80B
NDUFS3
METTL8
KBTBD4
DCAF17
B4GALT7
SOD2
AIG1
ZNF609
PFKM
APRT
DDX1
RPL7A
MED22
DCLRE1B
AP4B1
FLT3LG
CCDC107
MED18
RPS20
MRPL3
TARS3
TSPAN10
NPLOC4
HDAC2
ZNF546
CCAR2
C8orf58
MTHFD2L
NFIB
ZNF561
ALDH7A1
CCDC174
CRKL
ABCG1
TMEM259
CLUAP1
ARHGAP19
SLC35B1
TIAM1
SRP9
TMEM114
PCP4L1
FOXN1
PRELID3B
MLEC
GARS1
AASDH
CASC3
PIP4P2
ZNF441
GFI1B
CREM
PRKAB2
CRH
PDGFD
RABGGTA
ARMH3
TPM4
MEMO1
ZBTB40
PACSIN2
CCDC115
CASS4
PLCL2
DNAJC6
ARHGEF12
IRF9
KRR1
ATP10D
POLG
CNN2
ZNF540
TPR
ODR4
STOML2
NDUFA4
LARS2
ABCB10
TCTN3
CERS5
CUL5
UBOX5
FASTKD5
KNL1
RIF1
ORC4