ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPS derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
FRG2
CCDC200
CBX1
KLF4
BCAR3
DUX4
SMCO1
POU5F1
KLF14
JMJD1C
REEP3
SNX16
SRSF5
MUC3A
TMEM216
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
SOX2
ATP9B
ELOVL2
COL23A1
C3orf14
C1GALT1C1L
FAM184A
POU5F1B
RAB37
FANK1
CCDC130
MAD1L1
EXTL2
ATF7IP2
DHX40
VN1R4
MAIP1
RPL26L1
PLXDC2
FEM1C
TMEM43
CHCHD4
PDE4DIP
POTEH
KCNJ15
ITGB3BP
EFCAB7
CHMP6
UBE3A
ZFP30
RPS14
ATP1A1
MTF2
SIVA1
SPDYA
TMEM44
SCGB1C2
SCGB1C1
FAM227B
DTWD1
NBPF1
MTRNR2L1
TLR2
ANK1
USP30
RNF187
PEX3
ADAT2
RTTN
ENOSF1
GK5
DHRS7
PAQR9
HNRNPL
BRWD1
NUF2
PNPLA7
HMGB1
USPL1
TMX4
PDCD7
TTLL12
AVPR1A
SAMD4B
TRAF6
RAG1
CD47
COLEC11
TFPI
SOX30
C5orf52
SPATC1L
GTF2A1L
C2orf88
TRDMT1
SLC11A2
SDCBP
INPP5F
MRPL22
GEMIN5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HUS1
ZKSCAN2
SLC39A6
ELP2
ANKRD18B
TBC1D2
ANP32D
DCP1A
PTGES2
AGBL3
XKR6
NEMF
POLR2J3
CBWD5
CBWD3
ANKRD54
EIF3L
CLGN
ZCCHC7
GMDS
TMEM242
STX16
EIF2S2
GAGE2A
ADAMTS20
DUSP16
MIS18BP1
RPAP2
GLMN
CNTLN
KBTBD7
ANO5
CAT
LBR
FKBP9
SULT1B1
C19orf18
SLC44A1
OR8B3
HECTD1
GAGE12I
GAGE7
GAGE5
GAGE4
GAGE2B
IQGAP2
RAD54L2
EIF5A2
BTBD10
NEIL3
STX18
MRPL40
HIRA
LRP6
PRELID3B
NEK7
YTHDF3
PCDHB5
MTRNR2L8
SLC10A7
ZSWIM9
LIG1
ZNF562
NUP54
PLCL2
ARHGEF12
DNM3
ZNF416
ZIK1
TMEM41A
RIPPLY3
KAT6B
CRH
CTNNB1
C1orf53
ILRUN
PRPF40A
ARL6IP6
GLRB
YPEL3
FAM153B
PJA2
TASOR
C3orf80
KCTD3
NLGN4X
PGBD2
BTG1
ZNF584
GPR150
CNTRL
C5
TMEM98
RNF38
ARMCX1
ZMYM5
NOTCH2
TAS2R4
KANSL1
RIMS2
PPP2R2B
ZC3H12C
PCDH17
RFC1
YBEY
MCM3AP
PARP16
TMEM229A
ZNF572
DEK
ADAM22
MARCHF7
TULP4
PTPN12
RANBP2
DNAH6
USP35
KCTD21
RPS29
MED4
RUNDC1
PTGES3L-AARSD1
PTGES3L
WBP4
ELF1
CTSC
RFK
GRID2
KIF2C
NSFL1C
SH3BP5L
GDAP1
FH
CTXN2
DDX60L
MYEF2
RPL11
POLE4
LIMS1
ATL3
HSPA2
DPY19L4
MTERF4
PSMG1
PPP1R9A
KLHL7
HACD3
TNFRSF11B
COLEC10
ZNF623
TRMT5
SLC38A6
MRPS31
SNRPB
C18orf21
SNIP1
DNALI1
TARS3
EPS8
XKR4
KRBA1
IQCF2
CLTC
RNF130
OTOP1
POTEB
POTEB3
CDYL
SELENOT
HDAC1
SAMD13
SNRNP48
ARHGAP39
MS4A1
HYAL1
ZNF518A
KBTBD3
AASDHPPT
UTS2B
CCDC50
IQUB
DEPDC1
MFSD14A
LRRC8C
OPRK1
MRPL48
LGR5
ACBD6
SMAD5
SVOPL
MRPS5
MTHFS
CARS2
FIGNL1
DSTYK
RMDN2
TMA16
CCNI
FBXO34
BOLA1
TBC1D3L
TBC1D3F
TBC1D3H
TBC1D3G
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
TBC1D3J
KCNN2
CTAG1B
CTAG1A
MRPL21
IGHMBP2
SMIM13
HLCS
NAPG
WNT2B
PCDHGB7
KAAG1
DCDC2
ARNT
PCDHGA11
C15orf61
CERS6
ACYP2
DLAT
RUVBL1
SLC25A53
SLC25A18
EEFSEC
PEX2
COG6
ZSWIM5
HECW2
SF3A3
CLK4
C12orf73
EPM2A
PRKD3
WDR74
UBE4B
RNF6
ZNF791
ZNF490
CRTAP
P2RY1
ADIPOR1
RAD23B
SORCS1
MRAP2
GADD45A
EIF3D
MDM4
SSH2
ACAT1
DKK1
LRATD2
CLOCK
AKR1E2
TTC32
ZNF280D
ZNF286A
STBD1
CPD
PPP2CA
RRAS2
FAM98B
CPPED1
RSRC1
SHOX2
MRPS30
TTLL7
TATDN3
NSL1
PIK3R1
ALKBH3
LRTM2
MRPL42
SEC31A
DR1
THAP9
TYW1B
EIF4G2
ATG10
VPS37A
CNOT7
APOLD1
PCBP3
STK17A
PCDHA6
PCDHA5
PRDX3
NFE2L2
PPP5D1
CALM3
BCKDHB
EEF1AKMT2
RPS6
SLC35B4
ALG1
PARP4
E2F7
ENAH
COG2
TIGD6
HMGXB3
VAMP4
SH3RF2
MBD4
IFT122
STX17
DTD2
FHAD1
SLC39A8
ANGEL2
P4HA1
TMOD3
PCDHA4
HSPA1B
MED23
GTF2H2
PDCD6IP
RNF125
WDFY1
RPL6
THOC3
MTLN
L3HYPDH
JKAMP
PTPN11
ZC3H15
ARFGEF1
HEATR5B
GPATCH11
JRKL
CCDC82
PIK3CA
SVIP
HPS3
TMEM191B
NSMAF
PCDHGC3
RIOX1
ZDBF2
SGIP1
NARF
CYBC1
ZNF829
ZNF568
REXO4
ADAMTS13
ZNF25
NDUFA6
COPS8
ARL4A
BTG3
CCDC71L
SH3GLB1
HACE1
AKNA
GNAI1
BTF3
TRIM27
SEC22B
KANSL3
FER1L5
ZSCAN25
HYOU1
NOL12
G3BP2
SMARCAL1
GPR155
SUCLG2
CDC42SE2
INTS12
GSTCD
DRG2
SRSF7
ZNF391
MTIF2
GFM2
TOMM20L
PXK
CALM2
SPATA7
HDAC9
LRRC7
GPD2
LIN7C
C4orf36
HSF2
YTHDC2
UBE2D3
CLN5
RNASEH2C
SLC36A1
DEPTOR
BSDC1
METTL25
CCDC59
PFKM
SENP1
FZD1
UBQLN1
STXBP5L
SMIM10L1
PRH1-TAS2R14
PRH1
SEC61A2
MPP5
PPP1R12A
NAP1L1
GPR88
CHST14
ZNF324B
COMMD2
RBBP9
GTF3C3
AUH
COX18
METTL16
UBE2Q1
PHF3
HERC4
TBC1D31
ZNF544
SRSF12
SETD5
NID2
TMX2
MED19
GINS1
TLNRD1
GGA1
RBM15B
RPN2
MROH8
NT5E
AKAP9
SLC46A3
STAG3
GPC2
LRRC75A
WDR72
OPRL1
LKAAEAR1
SLC35A3
RPL5
CRNKL1
CFAP61
NMRAL1
HMOX2
MRPL17
SYT1
ZNF485
ZSCAN32
ZNF174
NEK9
PCM1
ZNF354C
ORC2
DNAH14
ZNF518B
SLAIN2
FBXL5
ACP6
TRERF1
DIPK2A
P3H1
DPF2
HTR5A
TMEM202
MTMR9
MPHOSPH10
MCEE
PTPDC1
SPRYD7
SMAP1
SS18
WDR12
CARF
SDR42E1
CADM2
MTR
MRPL44
ZNF30
ATR
KLHL20
MTBP
MRPL13
CBWD6
SMIM12
MAPK1IP1L
GOT2
EXOC2
TTC37
ARSK
TYW3
CRYZ
CCDC138
ZNF24
HECTD2
CHSY3
ISCA1
HADH
CFAP206
NELFCD
CHMP2B
POLR3D
SLC25A27
CYP39A1
FNBP1L
ADGRG6
TACSTD2
FN1
CRHBP
ZNF32
KLHL41
DUS1L
METTL9
FAM172A
ADAR
DCP1B
ZC3H6
MAGEF1
DNAH7
PCNA
KBTBD6
LUC7L3
FANCA
GRIA4
PUS3
DDX25
CD14
TGFBR2
C6orf89
RHEX
ZNF341
PKD2L2
PPP1R8
PPIL1
HERC3
PYURF
PIGY
SRPRB
ANO10
ABHD5
BTBD1
NCAM1
CENPV
PSMA1
NTSR2
NANOGP8
CEP78
LRRD1
ATP6V1C1
ZNF26
MSRB2
LGALSL
TJP2
PDE3B
PCDHA12
PCDHB4
PCDHA13
GNAL
ZNF329
MRPL58
ANKRD36
FAN1
CTHRC1
GPR37
RHBDD1
THUMPD1
MTHFD2
ATP7B
ALG11
IMPACT
UGT8
SMC3
MYBL1
TMEM185B
NRG3
RNF32
KMT2A
MRPL39
SLC25A28
SLC25A32
DCAF13
ANTXR2
EFCAB13
ZFYVE9
BTRC
GMFB
SYS1
FZD7
NASP
NUP58
TRIL
B3GALNT1
PRSS38
OR1E3
RPS3A
B4GALT7
MEMO1
ANKRD36C
MRGPRX3
BBS5
MANF
RDH14
CEP63
ANAPC13
GINM1
GTF2E2
UBE2V2
STRN3
AP4S1
ZFP2
GCH1
PCDHA7
HSPA1L
HSPA1A
EIF2D
ZNF512B
AGK
AMZ2
CCDC90B
NOC3L
INO80D
CBR3
FAM185A
SLC38A1
PAG1
CCDC112
ERV3-1-ZNF117
ERV3-1
MINDY2
EIF3A
PCYOX1L
KLHL14
SUSD5
ZNF454
RTP3
ABCC10
DDX1
WDR47
ZFP91
LPXN
AGL
CDC25B
ICE2
CENPB
WASHC4
SPEF1
ALMS1
ADRB1
QKI
PCDHB14
CAVIN3
ARPP21
BCL2
GAGE12H
GAGE12E
GAGE12D
GAGE12C
GAGE12G
GAGE12F
OR10AC1
PDE11A
ZNF670
MAN2C1
CTNND2
TACR3
TRAM2
CADM1
GAPVD1
TATDN1
NDUFB9
MYNN
ACTRT3
DIDO1
GID8
CCPG1
C15orf65
RNF138
TSPAN12
ZNF443
ST8SIA4
TAB2
ZNF229
PRDX6
PCDHA3
SEMA6D
PCDHA2
HORMAD2
FRA10AC1
MOB4
BMS1
C10orf88
CHD1L
PRKAB2
PDGFD
UBOX5
FASTKD5
POLR1F
KCNH1
EPHA3
TTC14
POC1B-GALNT4
POC1B
GALNT4
TMEM106B
SLC35E3
SRSF11
SMIM8
NLE1
PSMD14
TFAM
CC2D2B
ETNK1
ALG9
ZC3H14
LOC643802
ZNF354B
ZNF780A
GPR180
MTMR2
ADK
CBY3
ITM2B
ATP5F1E
RICTOR
STARD6
C18orf54
RRS1
ADHFE1
RPAP3
PTDSS1
MTERF3
CXCL6
PXYLP1
UPF2
PRR5L
PCDHB13
HMGCLL1
TRPC3
PCDHB12
CLVS2
OR8S1
QRFPR
SNX32
TRPA1
DEGS2
OAZ3
SLC24A1
TTI2
ABCA3
ELF2
TBC1D5
PPP2R5A
ACSL1
CTBS
EGLN1
C2orf69
TRIM44
LCMT2
ADAL
LY75-CD302
LY75
FAM114A1
PGAP4
SEC31B
WDR11
SLC45A4
HSPE1-MOB4
HSPE1
HSPD1
AASDH
RAD52
CFAP20
FBXO22
DYNLRB2
YWHAE
CNIH1
HNRNPF
NXPE3
GHITM
PKM
PEX7
FAM161B
COQ6
JAK2
FZD6
KDR
EDNRB
MAD2L1
MAP3K1
ARFGAP3
GUCY1A2
TCF25
SYT16
ERICH6
CELSR1
SELENOH
PRIM2
SMG7
C5orf34
NFYC
NCEH1
CYP2R1
FECH
CEBPB
BORCS5
PCDHGB1
SNCA
INO80
CFAP91
FAM149A
FBLL1
PCDHGA3
TTC12
SERP2
DCAF10
FAM160B1
APRT
CYP51A1
NUDT4B
NUDT4
CBR1
ELP1
ABITRAM
ZNF621
SEC24B
GABPB1
TMEM30B
KIFBP
RALGAPA1
NKIRAS1
LHFPL4
PLD1
SCYL2
DEPDC4
NR1D2
GRB14
APOA1
KMT2D
MAP3K7CL
ZBTB6
CCT8
TMEM267
HSPA5
RB1
ZNF830
CCT6B
TESMIN
ZNF622
HSD17B12
ANKRD18A
PCDHB3
EPSTI1
NTAN1
PCDHB2
PCDHGA12
MDFIC
MOV10
PLPPR5
ST6GAL2
TRIP4
SUPT7L
SLC4A1AP
GOLGA6L7
SLC26A4
TBC1D13
RMDN1
FANCF
PHF10
CPNE3
FZD9
PHLPP1
SPAG6
DIRAS2
PODXL2
LIFR
RHOB
ERBB4
RPL37
TMBIM4
KLRD1
CGGBP1
FER
RINT1
POLR3G
MBLAC2
PPP1R12B
NDFIP1