ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702139 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◣ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

SMCO1
OR2T1
GPD1L
PDE11A
TMEM44
KCNJ15
FRG2C
THEM4
CCDC200
AADACL4
MAMDC2
FAM209A
BSDC1
DUX4
YPEL3
IRAK2
ITGB3BP
EFCAB7
FRG2
FAM153B
SNCG
MMRN2
UBE2F
FAM184A
KRBA1
TMEM89
WDR74
ANP32D
TATDN2
COL23A1
MTRNR2L8
RABGAP1
APOA1
TBX6
C2orf88
GORASP2
LEP
DEGS2
MUC3A
CFHR4
MTRNR2L2
EXTL2
MBOAT4
MSH3
DHFR
TLR2
SULT1C3
ZNF572
PRSS38
OR4K17
FEM1C
APOBEC3B
ZNF324B
ZNF117
BCAR3
LMLN2
BAAT
TMEM229B
ADCY10
GSTM5
NUF2
ST20-MTHFS
ZNF562
SARS2
MRPS12
RBBP5
MTF2
TXNRD2
RAB37
SLC1A7
RBPJ
COL18A1
SCCPDH
CTAG1B
CTAG1A
C19orf18
CBX1
IGFALS
YWHAQ
CALCB
CYP17A1
FAM227B
DTWD1
MAPRE2
APOL4
NARF
GBA
RABGAP1L
CAT
BCR
ACAA2
MTRNR2L1
RPS7
ARHGAP39
DMAP1
ZNF761
MON2
SNX16
ZFP30
AURKAIP1
GPRC5C
SAMD4B
DUSP6
SF3A3
ACYP2
SLC27A5
ZNF623
SSBP1
RFC1
TMEM62
C1GALT1C1L
COX16
CYBC1
RBM33
FBXO31
PNPLA7
SUPT6H
SDF2
PDCD7
DBNDD2
TARS2
SMIM31
SDR42E1
JMJD1C
TBC1D19
PAXBP1
FASTKD1
MAD1L1
SELENOH
GALNT1
DCP1A
SUMO3
RPS29
CCDC130
SEM1
PRRT1B
SLC2A7
C16orf54
COMMD2
MED23
TRIP4
PEX3
ADAT2
FRA10AC1
SATB1
TMEM242
MMACHC
FAAH
RPL27
HTR5A
NFE2L3
RBBP9
C3orf14
RPL11
TTC32
ACOX3
RNASET2
OAZ3
DSTYK
NPAS4
CEP85
CLTB
SUPT7L
SLC4A1AP
TATDN3
NSL1
LUC7L2
REM1
DEFB124
FMC1-LUC7L2
FMC1
ZNF577
LSS
ACTL8
TMX2
MED19
SLC24A1
TTLL12
ZMPSTE24
MSRA
SCGB1C2
SCGB1C1
TRMT44
CALD1
THOC5
ZSCAN31
EFCAB10
PIN4
NDUFS7
DNAJC25-GNG10
DNAJC25
TMEM14C
ZNF566
YJU2
NME1
SLC38A9
SLC33A1
EIF2D
INTS12
GSTCD
CANT1
TACO1
TEX50
ZNF32
KDM3A
STX18
TEFM
COLEC11
NOS3
ADAMDEC1
DLAT
RPL37
REEP3
RMDN2
DUSP16
MNAT1
CALCRL
LSG1
LARP1
ACSM2B
POLR3B
STX16
RPS14
ADI1
DRG2
CADM2
CASP10
SKP2
LMBRD2
ATP9B
ZNF829
ZNF568
GTF3C3
HMGB1
TMEM41A
GTF2H4
ALG10B
DNAJB12
METTL25
CCDC59
NEMF
GTF2A1L
PSEN1
TDP2
ACOT13
STC1
UTP3
PPIP5K2
FABP6
NOTCH2NLC
SERHL2
PDE4DIP
DHRS2
DCAF10
GTF2H2
RTCA
INTS5
TMBIM4
TFPI
PAFAH2
CASP4
SAR1B
MOB4
ST6GALNAC6
KDM1A
WDR11
MTR
HSD17B6
ZNFX1
SRSF7
SEC22B
RTTN
ZNF792
ATP5MC2
TOP3B
VTA1
NMBR
NOTCH2NLB
NOTCH2NLA
USPL1
MROH7
REXO4
ADAMTS13
DEK
CD14
POLE4
DPY19L4
PIK3R1
DISP1
GABPB2
TRMT5
SLC38A6
TBCK
AIMP1
VN1R4
PRDX3
MAIP1
RAD54L2
KANSL3
FER1L5
TMEM68
TGS1
GCNT1
STAT3
SLC25A51
CLEC12A
RERE
NME4
TFPT
PRPF31
IPO4
ZNF317
TEX46
ZNF556
CNOT3
CLK4
ATF7IP2
MTERF4
KIF2C
PUM1
ILF2
TOR1AIP2
TOR1AIP1
WDR36
ATF7IP
TTC26
ESR2
EIF3F
BANP
NCOA7
MRPL44
ENG
KMT2A
SAMD4A
NDUFB3
FAM126B
ZNF408
ARHGAP1
POLR2J3
FGD3
SLC44A1
TIGD2
RTP3
SLTM
MRPL30
MITD1
LCN8
MRPS31
RAB30
CDYL
ZNF30
GTF2H2C_2
GTF2H2C
EPRS1
CDK5RAP1
YY1AP1
DAP3
STK19
SPAAR
DXO
ARRDC2
CCDC97
INO80C
PPP1R3B
NR1H3
ACP2
CEP72
HERPUD2
TAAR9
TTI2
PPP6R1
MRPL40
HIRA
INPP5F
CFAP298-TCP10L
CFAP298
ZNF391
ZNF426
RCHY1
H4C11
MRPL21
IGHMBP2
CLDN4
KLHL41
SLC45A4
MTIF2
TMEM43
CHCHD4
H4C12
IQCF2
MRPS18C
HELQ
PSMF1
OR8B3
COX7A2
SLC35G5
H4C8
PMF1-BGLAP
PMF1
OPA1
LMBR1L
BNIP1
PRKAG2
UBE4B
ZNF841
S100A9
SLC41A3
POLR2J2
NUP54
IL36A
SNAP47
JMJD4
BAIAP2
LBR
RGPD2
RGPD1
CCDC150
RCAN1
NSFL1C
SNRPB
CCNC
TBL1X
PPIG
NUDT9
TULP4
PARP15
DNAJB13
IL21R
IQSEC3
MRPL48
RNF217
ADNP
KLRD1
TMEM79
SMG5
GFM2
C8orf37
GLIPR1L2
C18orf21
COPS7B
SMG8
BMS1
ATR
TTC5
OR1E3
USP30
GINS1
NBPF1
IFT88
PES1
REN
PDCD6IP
LRRC61
XKR7
BRF2
ANK1
MRPL1
OR2AP1
ZNF554
CD200R1L
MTOR
THOC2
DGKQ
RNF187
SNIP1
DNALI1
GALK2
IQGAP2
ZNF292
ATP1A1
C1orf167
RAB6D
CATIP
PRIM2
ASPSCR1
KLHL20
AKAP10
MS4A1
TMEM202
AARS2
ALKBH3
AUH
IL36RN
IL36B
GSTA4
TSFM
ZNF772
LRIG2
TTLL1
FGF1
SGCE
PEG10
CELF2
FRG1
MRPS23
ZNF134
EIF1AD
BANF1
ZNF383
FAM133B
SEL1L
OPRL1
LKAAEAR1
CYP4X1
N4BP2L2
HACL1
BTD
ZSCAN25
TTC23L
FANCI
TRUB2
EPB41
COQ4
PHB
ZNF165
PRSS41
MTBP
MRPL13
GTF3C5
SCMH1
PLEKHM3
SF3B6
FAM228B
CDC73
COPS4
IAH1
FAM160B1
CCDC83
DUS1L
SLC35A3
PDRG1
RUVBL1
EML2
HYOU1
ZNF582
TUT1
GTPBP3
ANO8
DDX18
SCNM1
LYSMD1
SDHAF3
ARID1A
TMED1
LSM5
ZNF280D
NAT8
ZSCAN22
CENPV
CCDC88A
SMU1
DHX16
TGFBR2
SH3BP5L
FAM98B
ZSCAN30
C10orf88
TPK1
LRP6
COA6
TMEM222
VPS13B
ZNF677
VN1R2
TRIM48
NECAP2
RPL5
CLTC
ZNF385A
SNX17
EIF2B4
RBM45
CLUL1
CEP85L
GPAM
HYAL1
RMND1
ARMT1
NOP16
HIGD2A
TMPRSS7
AVL9
HIP1
ERBB3
SCAND1
LOC102724265
CPPED1
ANXA3
SMARCD2
TMOD1
ISY1-RAB43
ISY1
C17orf75
MRAP2
WDR55
EIF3E
PUS10
PEX13
AFAP1L1
FBXO38
R3HCC1
PIH1D2
NKAPD1
TMEM101
PDE7B
SUGCT
MPLKIP
DPP9
GLO1
COPS2
HSPE1-MOB4
HSPE1
HSPD1
CT45A10
CTAGE8
CTAGE4
ALG10
SNRPD1
TMA16
ATG4C
METAP1D
ABCC10
MACC1
DHTKD1
MRPS14
ERICH3
SEC13
ALG14
FGFBP3
COX8C
RPS15
GRPEL2
ZNF670
DRAP1
C11orf68
SREK1IP1
CWC27
CBWD5
TTC4
HEATR4
ARID3B
CCNI
HEATR1
GAS2L3
CBWD3
CCSER2
HAX1
PTDSS2
SMG7
ACTR3C
POLDIP3
GASK1A
SMIM13
CCR6
SPARCL1
LGR5
AQP10
ZNF501
LRTM2
RNF125
ANO9
CCDC149
NUP107
SRRM3
PDE6D
CHD1L
PRPF18
FBXL12
CD248
RNF6
PHIP
DNAJC24
DCDC1
MMEL1
POLR3E
EEA1
NBN
METTL9
TPM3
CEP120
ZBTB45
NRBP2
CLASP2
RPS3A
GNAL
SNRPB2
ZMYND8
SLC35E2A
HUS1
PRKAR1A
MAN2C1
WBP1
INO80B
NDUFS3
METTL8
KBTBD4
DCAF17
B4GALT7
TTC38
PKDREJ
SOD2
AIG1
ZNF609
PFKM
APRT
MRTFA
DDX1
RPL7A
MED22
DCLRE1B
AP4B1
FLT3LG
CCDC107
MED18
ZFP42
RPS20
MRPL3
TARS3
TSPAN10
NPLOC4
HDAC2
C5orf34
ZNF546
CCAR2
C8orf58
MTHFD2L
NFIB
CCNY
ZNF561
ALDH7A1
CCDC174
CRKL
ABCG1
TMEM259
CLUAP1
ARHGAP19
LIPA
SLC35B1
TIAM1
SRP9
TMEM114
PCP4L1
FOXN1
PRELID3B
MLEC
GARS1
AASDH
CASC3
PIP4P2
ZNF441
ZNF512B
GFI1B
CREM
PRKAB2
CRH
PDGFD
RABGGTA
ARMH3
TPM4
MEMO1
PHC2
ZBTB40
PACSIN2
CTAGE9
CCDC115
CASS4
CT45A7
PLCL2
DNAJC6
ARHGEF12
IRF9
KRR1
ATP10D
POLG
CNN2
ZNF540
TPR
ODR4
STOML2
NDUFA4
LARS2
ABCB10
PLSCR4
TCTN3
CERS5
NSUN7
CUL5
B4GALNT2
UBOX5
FASTKD5
KNL1
RIF1
ORC4
MBD5
ADRM1
SEC23B
RRP15
RPS26
PRKAB1
NOL12
GATAD1
TMBIM6
NMNAT1
LZIC
C16orf90
ZCCHC4
VIRMA
SESN1
HLA-E
ATP5MC3
FUT3
SLC35G3
MRPS33
TIGD1
EIF4E2
TMEM70
OR6J1
ELOC
ELAVL3
GTF3C2
ZNF699
TMEM132A
MPHOSPH8
POLN
HAUS3
FAM13B
CBWD6
SMIM12
MAPK1IP1L
MSL2
NNT
LPIN1
GLIPR1L1
CAPS2
UIMC1
SURF2
SURF1
KMT2D
FAM234A
TRAF6
RAG1
NDUFC2-KCTD14
NDUFC2
KSR1
CHMP7
CDIPT
ZNRF4
MAST4
RTN4
NUP205
ANKRD54
MRPL16
MRPL39
GADD45A
ABCA3
TRIM5
FAM13A
HNRNPL
CTNNB1
CNOT11
ZNF438
EIF2B3
WDR31
DCT
ZNF571
PDE4C
COG2
ZNF770
PSMD3
CGGBP1
SYN3
TTC21B
RAB18
ZMYM5
POLR1F
TMEM107
RNASE10
PTPN12
POM121L2
STK32C
CT45A6
CT45A3
BDH1
DDX41
DNAJC11
SACM1L
TNFRSF1B
MRPS36
SPRR2F
RANBP9
RAD52
FAM207A
CFAP20
DPH2
FBXW7
ZNF557
KAT6A
P2RX6
NCBP3
ERCC6L2
CNGA1
GRAMD4
ANK3
ADPRS
AQP2
WTAP
UGCG
RPL38
NFAT5
ZNF76
SNRPE
LZTR1
EIF3L
WWTR1
TAF13
PTGS1
MAGOH
SH2D4B
PRSS22
ASF1A
C11orf49
SGMS2
S100Z
MRPL11
CARD8
LRRC29
CRLF3
AHCYL1
MRPL34
SIVA1
KRTAP10-8
TIMM22
HNRNPA1L2
FUT10
ZKSCAN2
TOMM20L
PSMB2
CUL2
TNPO3
SUGT1
SLC30A6
SPSB1
PRMT5
HTR4
CEP57L1
C11orf86
TRMT61B
ZNF114
RPTOR
COL4A5
SLC39A3
CCNT1
HSD17B4
ATXN7L2
KCNH1
AGK
RWDD1
C2CD5
GOLGA6L7
DNAJB2
DDX46
CRBN
MRPL42
BRWD1
TANGO2
RANBP1
MRPL22
GEMIN5
EPHA3
CACNG1
NOTCH2
IPP
SMAP2
AAR2
TRDMT1
ZNF329
MAN2A1
WDFY1
QRICH1
TEKT2
ANKRD40
PIKFYVE
YTHDC2
ATXN2L
TRPM3
C6orf89
GINS3
ZNF3
LRRC59
SAXO1
PPIL3
NIF3L1
EXO5
SLC39A13
SENP1
BCKDK
SFSWAP
INTS2
GMEB2
PTPRCAP